RNA–Protein interactions for RNA: ENSMUST00000171404.7

Gtf3c4-204, Transcript of General transcription factor 3C polypeptide 4, mousemouse

TSL 1 (best) BASIC

Gene Gtf3c4, Length 7,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c4-204ENSMUST00000171404 Mrs2Q5NCE8 434 aa21.06■□□□□ 0.96
Gtf3c4-204ENSMUST00000171404 Rtn4Q99P72 1162 aaKnown RBP21.03■□□□□ 0.96
Gtf3c4-204ENSMUST00000171404 Clstn1Q9EPL2 979 aa21.02■□□□□ 0.96
Gtf3c4-204ENSMUST00000171404 BlmO88700 1416 aa21.01■□□□□ 0.95
Gtf3c4-204ENSMUST00000171404 Anks4bQ8K3X6 423 aa21.01■□□□□ 0.95
Gtf3c4-204ENSMUST00000171404 Apbb1Q9QXJ1 710 aa21■□□□□ 0.95
Gtf3c4-204ENSMUST00000171404 Rgl3Q3UYI5 709 aa21■□□□□ 0.95
Gtf3c4-204ENSMUST00000171404 Hsp90ab1P11499 724 aaKnown RBP20.97■□□□□ 0.95
Gtf3c4-204ENSMUST00000171404 Wdr43Q6ZQL4 677 aaKnown RBP20.97■□□□□ 0.95
Gtf3c4-204ENSMUST00000171404 NgefQ8CHT1 710 aa20.96■□□□□ 0.95
Gtf3c4-204ENSMUST00000171404 Kdm2aP59997 1161 aa20.95■□□□□ 0.94
Gtf3c4-204ENSMUST00000171404 Brd4Q9ESU6 1400 aaKnown RBP20.94■□□□□ 0.94
Gtf3c4-204ENSMUST00000171404 Znf326O88291 580 aa20.94■□□□□ 0.94
Gtf3c4-204ENSMUST00000171404 MyclP10166 368 aa20.94■□□□□ 0.94
Gtf3c4-204ENSMUST00000171404 Trim30dE9PWL0 497 aa20.91■□□□□ 0.94
Gtf3c4-204ENSMUST00000171404 PtmaP26350 111 aa20.88■□□□□ 0.93
Gtf3c4-204ENSMUST00000171404 Grwd1Q810D6 446 aaKnown RBP20.88■□□□□ 0.93
Gtf3c4-204ENSMUST00000171404 Trim44Q9QXA7 346 aa20.88■□□□□ 0.93
Gtf3c4-204ENSMUST00000171404 Neurod2Q62414 383 aa20.87■□□□□ 0.93
Gtf3c4-204ENSMUST00000171404 Armcx1Q9CX83 456 aa20.85■□□□□ 0.93
Gtf3c4-204ENSMUST00000171404 Ccer2J3QPU5 274 aa20.85■□□□□ 0.93
Gtf3c4-204ENSMUST00000171404 Rb1cc1Q9ESK9 1588 aa20.84■□□□□ 0.93
Gtf3c4-204ENSMUST00000171404 CanxP35564 591 aaKnown RBP20.84■□□□□ 0.93
Gtf3c4-204ENSMUST00000171404 Ecm2Q5FW85 670 aa20.82■□□□□ 0.92
Gtf3c4-204ENSMUST00000171404 Aplp2Q06335 707 aa20.79■□□□□ 0.92
Gtf3c4-204ENSMUST00000171404 Dbr1Q923B1 550 aa20.78■□□□□ 0.92
Gtf3c4-204ENSMUST00000171404 IqubQ8CDK3 788 aa20.77■□□□□ 0.91
Gtf3c4-204ENSMUST00000171404 Cep164Q5DU05 1446 aa20.76■□□□□ 0.91
Gtf3c4-204ENSMUST00000171404 Plcb2A3KGF7 1181 aa20.75■□□□□ 0.91
Gtf3c4-204ENSMUST00000171404 Clstn2Q9ER65 966 aa20.75■□□□□ 0.91
Gtf3c4-204ENSMUST00000171404 Exosc9Q9JHI7 438 aaKnown RBP20.75■□□□□ 0.91
Gtf3c4-204ENSMUST00000171404 1700019A02RikA0A087WPV9 146 aa20.73■□□□□ 0.91
Gtf3c4-204ENSMUST00000171404 Arhgap27A2AB59 869 aa20.72■□□□□ 0.91
Gtf3c4-204ENSMUST00000171404 Ofd1Q80Z25 1017 aa20.72■□□□□ 0.91
Gtf3c4-204ENSMUST00000171404 Gm6268A2A3U9 297 aa20.72■□□□□ 0.91
Gtf3c4-204ENSMUST00000171404 Srpk2O54781 681 aaKnown RBP20.7■□□□□ 0.9
Gtf3c4-204ENSMUST00000171404 Spryd3E9Q9B3 442 aa20.7■□□□□ 0.9
Gtf3c4-204ENSMUST00000171404 Stk24Q99KH8 431 aa20.7■□□□□ 0.9
Gtf3c4-204ENSMUST00000171404 Abcc8B2RUS7 1588 aa20.7■□□□□ 0.9
Gtf3c4-204ENSMUST00000171404 Dcaf1Q80TR8 1506 aa20.69■□□□□ 0.9
Gtf3c4-204ENSMUST00000171404 Fam71e1A1L3C1 212 aa20.69■□□□□ 0.9
Gtf3c4-204ENSMUST00000171404 Gm20521D3Z5F7 333 aa20.68■□□□□ 0.9
Gtf3c4-204ENSMUST00000171404 Cnga1P29974 684 aa20.67■□□□□ 0.9
Gtf3c4-204ENSMUST00000171404 Setd5Q5XJV7 1441 aa20.64■□□□□ 0.89
Gtf3c4-204ENSMUST00000171404 Aebp2Q9Z248 504 aaKnown RBP20.63■□□□□ 0.89
Gtf3c4-204ENSMUST00000171404 Mroh3A0A1D5RM54 893 aa20.63■□□□□ 0.89
Gtf3c4-204ENSMUST00000171404 Stag3O70576 1240 aa20.62■□□□□ 0.89
Gtf3c4-204ENSMUST00000171404 Card11Q8CIS0 1159 aa20.61■□□□□ 0.89
Gtf3c4-204ENSMUST00000171404 B4galnt3Q6L8S8 986 aa20.58■□□□□ 0.89
Gtf3c4-204ENSMUST00000171404 Mapk8ip3Q9ESN9 1337 aa20.58■□□□□ 0.89
Gtf3c4-204ENSMUST00000171404 Rrp7aQ9D1C9 280 aaKnown RBP20.57■□□□□ 0.88
Gtf3c4-204ENSMUST00000171404 PnnO35691 725 aaKnown RBP20.55■□□□□ 0.88
Gtf3c4-204ENSMUST00000171404 Plin1Q8CGN5 517 aa20.54■□□□□ 0.88
Gtf3c4-204ENSMUST00000171404 Pes1Q9EQ61 584 aaKnown RBP20.54■□□□□ 0.88
Gtf3c4-204ENSMUST00000171404 Ppp1r18Q8BQ30 594 aa20.49■□□□□ 0.87
Gtf3c4-204ENSMUST00000171404 Sh3bp5Q9Z131 463 aa20.48■□□□□ 0.87
Gtf3c4-204ENSMUST00000171404 Slc4a3P16283 1227 aa20.47■□□□□ 0.87
Gtf3c4-204ENSMUST00000171404 Q8BT18 775 aa20.45■□□□□ 0.86
Gtf3c4-204ENSMUST00000171404 Hsp90b1P08113 802 aaKnown RBP20.44■□□□□ 0.86
Gtf3c4-204ENSMUST00000171404 Senp3Q9EP97 568 aaKnown RBP20.44■□□□□ 0.86
Gtf3c4-204ENSMUST00000171404 Znf316Q6PGE4 1016 aa20.43■□□□□ 0.86
Gtf3c4-204ENSMUST00000171404 Kif15Q6P9L6 1387 aa20.42■□□□□ 0.86
Gtf3c4-204ENSMUST00000171404 Ggt6Q6PDE7 497 aa20.41■□□□□ 0.86
Gtf3c4-204ENSMUST00000171404 Pcmtd1P59913 357 aa20.37■□□□□ 0.85
Gtf3c4-204ENSMUST00000171404 U2surpQ6NV83 1029 aaKnown RBP20.37■□□□□ 0.85
Gtf3c4-204ENSMUST00000171404 MlecQ6ZQI3 291 aaKnown RBP20.37■□□□□ 0.85
Gtf3c4-204ENSMUST00000171404 Casc1Q6TDU8 730 aa20.36■□□□□ 0.85
Gtf3c4-204ENSMUST00000171404 Htatsf1Q8BGC0 757 aa20.35■□□□□ 0.85
Gtf3c4-204ENSMUST00000171404 Stk26Q99JT2 416 aa20.34■□□□□ 0.85
Gtf3c4-204ENSMUST00000171404 Tnnt1O88346 262 aa20.33■□□□□ 0.85
Gtf3c4-204ENSMUST00000171404 SafbD3YXK2 937 aaKnown RBP20.33■□□□□ 0.84
Gtf3c4-204ENSMUST00000171404 Map7O88735 730 aa20.33■□□□□ 0.84
Gtf3c4-204ENSMUST00000171404 Rassf8Q8CJ96 419 aa20.32■□□□□ 0.84
Gtf3c4-204ENSMUST00000171404 Iqcf3Q9D498 203 aa20.31■□□□□ 0.84
Gtf3c4-204ENSMUST00000171404 1700123L14RikQ3V2K7 440 aa20.31■□□□□ 0.84
Gtf3c4-204ENSMUST00000171404 Mtus2Q3UHD3 1353 aa20.3■□□□□ 0.84
Gtf3c4-204ENSMUST00000171404 Erich6bQ9D4S6 220 aa20.28■□□□□ 0.84
Gtf3c4-204ENSMUST00000171404 Anapc15P60007 132 aa20.27■□□□□ 0.84
Gtf3c4-204ENSMUST00000171404 Sox12Q04890 314 aa20.25■□□□□ 0.83
Gtf3c4-204ENSMUST00000171404 Ubap1lG3UW59 384 aa20.24■□□□□ 0.83
Gtf3c4-204ENSMUST00000171404 Ercc6F8VPZ5 1481 aa20.24■□□□□ 0.83
Gtf3c4-204ENSMUST00000171404 Wwc2Q6NXJ0 1187 aa20.24■□□□□ 0.83
Gtf3c4-204ENSMUST00000171404 Ccdc18Q640L5 1455 aa20.24■□□□□ 0.83
Gtf3c4-204ENSMUST00000171404 Ccdc27Q3V036 639 aa20.23■□□□□ 0.83
Gtf3c4-204ENSMUST00000171404 NudcO35685 332 aaKnown RBP20.22■□□□□ 0.83
Gtf3c4-204ENSMUST00000171404 Ccdc9Q8VC31 543 aaKnown RBP20.22■□□□□ 0.83
Gtf3c4-204ENSMUST00000171404 Eea1Q8BL66 1411 aa20.22■□□□□ 0.83
Gtf3c4-204ENSMUST00000171404 Rtf1A2AQ19 715 aaKnown RBP20.21■□□□□ 0.83
Gtf3c4-204ENSMUST00000171404 Cwc22Q8C5N3 908 aaKnown RBP20.21■□□□□ 0.83
Gtf3c4-204ENSMUST00000171404 Ppm1gQ61074 542 aa20.21■□□□□ 0.83
Gtf3c4-204ENSMUST00000171404 Znf330Q922H9 316 aa20.2■□□□□ 0.82
Gtf3c4-204ENSMUST00000171404 Rsf1E9PWW9 1441 aaKnown RBP20.19■□□□□ 0.82
Gtf3c4-204ENSMUST00000171404 MccE9PWI3 1003 aa20.19■□□□□ 0.82
Gtf3c4-204ENSMUST00000171404 Mical1Q8VDP3 1048 aa20.19■□□□□ 0.82
Gtf3c4-204ENSMUST00000171404 Speer4f1Q9D5Q6 258 aa20.16■□□□□ 0.82
Gtf3c4-204ENSMUST00000171404 Hspa5P20029 655 aaKnown RBP20.15■□□□□ 0.82
Gtf3c4-204ENSMUST00000171404 Dnttip2Q8R2M2 758 aaKnown RBP20.15■□□□□ 0.82
Gtf3c4-204ENSMUST00000171404 Tmco5bQ80X59 307 aa20.14■□□□□ 0.81
Gtf3c4-204ENSMUST00000171404 Rwdd1Q9CQK7 243 aa20.13■□□□□ 0.81
Gtf3c4-204ENSMUST00000171404 KnstrnQ9D9Z1 312 aaKnown RBP20.13■□□□□ 0.81
Retrieved 100 of 22,080 RNA–protein pairs in 18.7 ms