RNA–Protein interactions for RNA: ENSMUST00000156290.8

Ttc28-206, Transcript of Tetratricopeptide repeat protein 28, mousemouse

APPRIS P2 TSL 5 BASIC

Gene Ttc28, Length 10,688 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28-206ENSMUST00000156290 ArxO35085 564 aa12.38□□□□□ -0.43
Ttc28-206ENSMUST00000156290 Htatsf1Q8BGC0 757 aa12.35□□□□□ -0.43
Ttc28-206ENSMUST00000156290 Fam71e1A1L3C1 212 aa12.34□□□□□ -0.43
Ttc28-206ENSMUST00000156290 P3h3Q8CG70 732 aa12.33□□□□□ -0.44
Ttc28-206ENSMUST00000156290 Safb2Q80YR5 991 aaKnown RBP12.33□□□□□ -0.44
Ttc28-206ENSMUST00000156290 Ppp4r2Q0VGB7 417 aa12.32□□□□□ -0.44
Ttc28-206ENSMUST00000156290 Trim44Q9QXA7 346 aa12.31□□□□□ -0.44
Ttc28-206ENSMUST00000156290 Hdac5Q9Z2V6 1113 aa12.3□□□□□ -0.44
Ttc28-206ENSMUST00000156290 Adam1bQ8R534 806 aa12.29□□□□□ -0.44
Ttc28-206ENSMUST00000156290 Rad21Q61550 635 aaKnown RBP12.29□□□□□ -0.44
Ttc28-206ENSMUST00000156290 BlmO88700 1416 aa12.28□□□□□ -0.44
Ttc28-206ENSMUST00000156290 Kif15Q6P9L6 1387 aa12.28□□□□□ -0.44
Ttc28-206ENSMUST00000156290 CatipB9EKE5 520 aa12.26□□□□□ -0.45
Ttc28-206ENSMUST00000156290 AU015836B2RUM3 263 aa12.26□□□□□ -0.45
Ttc28-206ENSMUST00000156290 Arhgap27A2AB59 869 aa12.25□□□□□ -0.45
Ttc28-206ENSMUST00000156290 4933402E13RikQ9D4D2 429 aa12.24□□□□□ -0.45
Ttc28-206ENSMUST00000156290 Tnnt2P50752 301 aa12.23□□□□□ -0.45
Ttc28-206ENSMUST00000156290 Ppm1gQ61074 542 aa12.21□□□□□ -0.46
Ttc28-206ENSMUST00000156290 NacadQ5SWP3 1504 aa12.2□□□□□ -0.46
Ttc28-206ENSMUST00000156290 Irx6Q9ER75 438 aa12.2□□□□□ -0.46
Ttc28-206ENSMUST00000156290 Rgl3Q3UYI5 709 aa12.19□□□□□ -0.46
Ttc28-206ENSMUST00000156290 Setd5Q5XJV7 1441 aa12.19□□□□□ -0.46
Ttc28-206ENSMUST00000156290 Trim26Q99PN3 545 aa12.17□□□□□ -0.46
Ttc28-206ENSMUST00000156290 CanxP35564 591 aaKnown RBP12.16□□□□□ -0.46
Ttc28-206ENSMUST00000156290 Kdm2aP59997 1161 aa12.14□□□□□ -0.47
Ttc28-206ENSMUST00000156290 Mbd3Q9Z2D8 285 aaKnown RBP12.13□□□□□ -0.47
Ttc28-206ENSMUST00000156290 Grwd1Q810D6 446 aaKnown RBP12.12□□□□□ -0.47
Ttc28-206ENSMUST00000156290 Rsf1E9PWW9 1441 aaKnown RBP12.12□□□□□ -0.47
Ttc28-206ENSMUST00000156290 Pknox2Q8BG99 474 aa12.11□□□□□ -0.47
Ttc28-206ENSMUST00000156290 Ercc6F8VPZ5 1481 aa12.1□□□□□ -0.47
Ttc28-206ENSMUST00000156290 Ecm2Q5FW85 670 aa12.1□□□□□ -0.47
Ttc28-206ENSMUST00000156290 MyclP10166 368 aa12.1□□□□□ -0.47
Ttc28-206ENSMUST00000156290 Baz1aO88379 1555 aa12.09□□□□□ -0.47
Ttc28-206ENSMUST00000156290 Mrs2Q5NCE8 434 aa12.08□□□□□ -0.47
Ttc28-206ENSMUST00000156290 Gtf3c3Q3TMP1 882 aa12.07□□□□□ -0.48
Ttc28-206ENSMUST00000156290 Hsp90ab1P11499 724 aaKnown RBP12.06□□□□□ -0.48
Ttc28-206ENSMUST00000156290 Eea1Q8BL66 1411 aa12.06□□□□□ -0.48
Ttc28-206ENSMUST00000156290 NgefQ8CHT1 710 aa12.06□□□□□ -0.48
Ttc28-206ENSMUST00000156290 Rrp7aQ9D1C9 280 aaKnown RBP12.04□□□□□ -0.48
Ttc28-206ENSMUST00000156290 DekQ7TNV0 380 aaKnown RBP12.04□□□□□ -0.48
Ttc28-206ENSMUST00000156290 Golga3P55937 1487 aa12.04□□□□□ -0.48
Ttc28-206ENSMUST00000156290 Stk24Q99KH8 431 aa12.04□□□□□ -0.48
Ttc28-206ENSMUST00000156290 Tcerg1Q8CGF7 1100 aaKnown RBP12.03□□□□□ -0.48
Ttc28-206ENSMUST00000156290 Aebp2Q9Z248 504 aaKnown RBP12.03□□□□□ -0.48
Ttc28-206ENSMUST00000156290 Kdm5dQ62240 1548 aa12.03□□□□□ -0.48
Ttc28-206ENSMUST00000156290 PtmsQ9D0J8 101 aaKnown RBP12.03□□□□□ -0.48
Ttc28-206ENSMUST00000156290 Arid3cA6PWV5 409 aa12.02□□□□□ -0.49
Ttc28-206ENSMUST00000156290 Ipo9Q91YE6 1041 aa12.01□□□□□ -0.49
Ttc28-206ENSMUST00000156290 Rrp12Q6P5B0 1295 aaKnown RBP12.01□□□□□ -0.49
Ttc28-206ENSMUST00000156290 Map7d2A2AG50 781 aa12□□□□□ -0.49
Ttc28-206ENSMUST00000156290 Cnga1P29974 684 aa11.98□□□□□ -0.49
Ttc28-206ENSMUST00000156290 Calcoco2A2A6M5 331 aa11.98□□□□□ -0.49
Ttc28-206ENSMUST00000156290 Ppp1r18Q8BQ30 594 aa11.97□□□□□ -0.49
Ttc28-206ENSMUST00000156290 Apbb1Q9QXJ1 710 aa11.97□□□□□ -0.49
Ttc28-206ENSMUST00000156290 Clstn2Q9ER65 966 aa11.97□□□□□ -0.49
Ttc28-206ENSMUST00000156290 PtmaP26350 111 aa11.97□□□□□ -0.49
Ttc28-206ENSMUST00000156290 Ccdc18Q640L5 1455 aa11.96□□□□□ -0.49
Ttc28-206ENSMUST00000156290 Lmod3E9QA62 571 aa11.96□□□□□ -0.49
Ttc28-206ENSMUST00000156290 Ddrgk1Q80WW9 315 aa11.96□□□□□ -0.5
Ttc28-206ENSMUST00000156290 Vsig10D3YX43 558 aa11.95□□□□□ -0.5
Ttc28-206ENSMUST00000156290 Trim30dE9PWL0 497 aa11.95□□□□□ -0.5
Ttc28-206ENSMUST00000156290 MsnP26041 577 aaKnown RBP11.95□□□□□ -0.5
Ttc28-206ENSMUST00000156290 Pdcl3Q8BVF2 240 aa11.94□□□□□ -0.5
Ttc28-206ENSMUST00000156290 Map7O88735 730 aa11.94□□□□□ -0.5
Ttc28-206ENSMUST00000156290 Supt16hQ920B9 1047 aa11.93□□□□□ -0.5
Ttc28-206ENSMUST00000156290 Znf316Q6PGE4 1016 aa11.93□□□□□ -0.5
Ttc28-206ENSMUST00000156290 Mia2Q91ZV0 1396 aa11.93□□□□□ -0.5
Ttc28-206ENSMUST00000156290 Chmp4bQ9D8B3 224 aaKnown RBP11.93□□□□□ -0.5
Ttc28-206ENSMUST00000156290 Mroh3A0A1D5RM54 893 aa11.93□□□□□ -0.5
Ttc28-206ENSMUST00000156290 Srpk2O54781 681 aaKnown RBP11.92□□□□□ -0.5
Ttc28-206ENSMUST00000156290 Gm20521D3Z5F7 333 aa11.92□□□□□ -0.5
Ttc28-206ENSMUST00000156290 Rtn4Q99P72 1162 aaKnown RBP11.92□□□□□ -0.5
Ttc28-206ENSMUST00000156290 Neurod2Q62414 383 aa11.91□□□□□ -0.5
Ttc28-206ENSMUST00000156290 Arid4bA2CG63 1314 aaKnown RBP11.91□□□□□ -0.5
Ttc28-206ENSMUST00000156290 Cwc22Q8C5N3 908 aaKnown RBP11.9□□□□□ -0.5
Ttc28-206ENSMUST00000156290 Exosc9Q9JHI7 438 aaKnown RBP11.9□□□□□ -0.51
Ttc28-206ENSMUST00000156290 Ofd1Q80Z25 1017 aa11.89□□□□□ -0.51
Ttc28-206ENSMUST00000156290 Dnai1Q8C0M8 701 aa11.89□□□□□ -0.51
Ttc28-206ENSMUST00000156290 Fgd1P52734 960 aa11.89□□□□□ -0.51
Ttc28-206ENSMUST00000156290 Dnttip2Q8R2M2 758 aaKnown RBP11.88□□□□□ -0.51
Ttc28-206ENSMUST00000156290 AknaQ80VW7 1404 aa11.88□□□□□ -0.51
Ttc28-206ENSMUST00000156290 IqubQ8CDK3 788 aa11.88□□□□□ -0.51
Ttc28-206ENSMUST00000156290 Card11Q8CIS0 1159 aa11.87□□□□□ -0.51
Ttc28-206ENSMUST00000156290 BccipQ9CWI3 316 aa11.86□□□□□ -0.51
Ttc28-206ENSMUST00000156290 Mtus2Q3UHD3 1353 aa11.86□□□□□ -0.51
Ttc28-206ENSMUST00000156290 Stag3O70576 1240 aa11.86□□□□□ -0.51
Ttc28-206ENSMUST00000156290 Znf326O88291 580 aa11.86□□□□□ -0.51
Ttc28-206ENSMUST00000156290 Mapk8ip3Q9ESN9 1337 aa11.86□□□□□ -0.51
Ttc28-206ENSMUST00000156290 Rrp9Q91WM3 475 aaKnown RBP11.85□□□□□ -0.51
Ttc28-206ENSMUST00000156290 Ccdc88bQ4QRL3 1481 aa11.85□□□□□ -0.51
Ttc28-206ENSMUST00000156290 1700019A02RikA0A087WPV9 146 aa11.85□□□□□ -0.51
Ttc28-206ENSMUST00000156290 Hspa5P20029 655 aaKnown RBP11.85□□□□□ -0.51
Ttc28-206ENSMUST00000156290 Plcb2A3KGF7 1181 aa11.84□□□□□ -0.51
Ttc28-206ENSMUST00000156290 Stk26Q99JT2 416 aa11.84□□□□□ -0.51
Ttc28-206ENSMUST00000156290 MlecQ6ZQI3 291 aaKnown RBP11.84□□□□□ -0.51
Ttc28-206ENSMUST00000156290 Plin1Q8CGN5 517 aa11.84□□□□□ -0.51
Ttc28-206ENSMUST00000156290 Rpap1Q80TE0 1409 aa11.82□□□□□ -0.52
Ttc28-206ENSMUST00000156290 Armcx1Q9CX83 456 aa11.82□□□□□ -0.52
Ttc28-206ENSMUST00000156290 Q8BT18 775 aa11.82□□□□□ -0.52
Ttc28-206ENSMUST00000156290 Gm973E9Q295 1059 aa11.82□□□□□ -0.52
Retrieved 100 of 22,080 RNA–protein pairs in 13.8 ms