RNA–Protein interactions for RNA: ENSMUST00000111050.9

Bdnf-209, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,965 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-209ENSMUST00000111050 Slc4a3P16283 1227 aa10.51□□□□□ -0.73
Bdnf-209ENSMUST00000111050 4933416C03RikQ3V063 378 aa10.51□□□□□ -0.73
Bdnf-209ENSMUST00000111050 Ccer2J3QPU5 274 aa10.5□□□□□ -0.73
Bdnf-209ENSMUST00000111050 P3h3Q8CG70 732 aa10.5□□□□□ -0.73
Bdnf-209ENSMUST00000111050 Ipo4Q8VI75 1082 aa10.5□□□□□ -0.73
Bdnf-209ENSMUST00000111050 Cep162Q6ZQ06 1403 aa10.48□□□□□ -0.73
Bdnf-209ENSMUST00000111050 NacadQ5SWP3 1504 aa10.48□□□□□ -0.73
Bdnf-209ENSMUST00000111050 Ipo9Q91YE6 1041 aa10.47□□□□□ -0.73
Bdnf-209ENSMUST00000111050 Npm2Q80W85 207 aa10.46□□□□□ -0.73
Bdnf-209ENSMUST00000111050 DaxxO35613 739 aa10.46□□□□□ -0.74
Bdnf-209ENSMUST00000111050 Sin3aQ60520 1274 aaKnown RBP10.45□□□□□ -0.74
Bdnf-209ENSMUST00000111050 Kdm5bQ80Y84 1544 aa10.42□□□□□ -0.74
Bdnf-209ENSMUST00000111050 Crybg2B7ZCC2 1516 aa10.41□□□□□ -0.74
Bdnf-209ENSMUST00000111050 Smg6P61406 1418 aaKnown RBP10.4□□□□□ -0.74
Bdnf-209ENSMUST00000111050 Cecr2E9Q2Z1 1453 aa10.4□□□□□ -0.74
Bdnf-209ENSMUST00000111050 Synj1Q8CHC4 1574 aa10.4□□□□□ -0.74
Bdnf-209ENSMUST00000111050 Iqcf3Q9D498 203 aa10.4□□□□□ -0.75
Bdnf-209ENSMUST00000111050 Gm13697A2AK42 830 aa10.39□□□□□ -0.75
Bdnf-209ENSMUST00000111050 Kcnn1Q9EQR3 537 aa10.38□□□□□ -0.75
Bdnf-209ENSMUST00000111050 Arhgap27A2AB59 869 aa10.37□□□□□ -0.75
Bdnf-209ENSMUST00000111050 ChgaP26339 463 aaKnown RBP10.36□□□□□ -0.75
Bdnf-209ENSMUST00000111050 Hspa5P20029 655 aaKnown RBP10.35□□□□□ -0.75
Bdnf-209ENSMUST00000111050 Mrs2Q5NCE8 434 aa10.35□□□□□ -0.75
Bdnf-209ENSMUST00000111050 Baz1bQ9Z277 1479 aa10.35□□□□□ -0.75
Bdnf-209ENSMUST00000111050 Kcnh8P59111 1102 aa10.34□□□□□ -0.75
Bdnf-209ENSMUST00000111050 Top2bQ64511 1612 aa10.34□□□□□ -0.75
Bdnf-209ENSMUST00000111050 Fam50aQ9WV03 339 aaKnown RBP10.34□□□□□ -0.75
Bdnf-209ENSMUST00000111050 Rtn4Q99P72 1162 aaKnown RBP10.33□□□□□ -0.76
Bdnf-209ENSMUST00000111050 Cc2d2aQ8CFW7 1633 aa10.33□□□□□ -0.76
Bdnf-209ENSMUST00000111050 Tcerg1Q8CGF7 1100 aaKnown RBP10.32□□□□□ -0.76
Bdnf-209ENSMUST00000111050 Znf692Q3U381 531 aa10.31□□□□□ -0.76
Bdnf-209ENSMUST00000111050 Taok2Q6ZQ29 1240 aa10.31□□□□□ -0.76
Bdnf-209ENSMUST00000111050 Zfp777B9EKF4 885 aa10.3□□□□□ -0.76
Bdnf-209ENSMUST00000111050 Slc4a2P13808 1237 aaKnown RBP10.28□□□□□ -0.76
Bdnf-209ENSMUST00000111050 UacaQ8CGB3 1411 aa10.28□□□□□ -0.76
Bdnf-209ENSMUST00000111050 Wwc2Q6NXJ0 1187 aa10.28□□□□□ -0.76
Bdnf-209ENSMUST00000111050 AampJ3QN89 436 aa10.27□□□□□ -0.77
Bdnf-209ENSMUST00000111050 Zbtb4Q5F293 982 aa10.26□□□□□ -0.77
Bdnf-209ENSMUST00000111050 Top2aQ01320 1528 aaKnown RBP10.26□□□□□ -0.77
Bdnf-209ENSMUST00000111050 CftrP26361 1476 aa10.25□□□□□ -0.77
Bdnf-209ENSMUST00000111050 Arap1Q4LDD4 1452 aa10.24□□□□□ -0.77
Bdnf-209ENSMUST00000111050 Pdcl3Q8BVF2 240 aa10.24□□□□□ -0.77
Bdnf-209ENSMUST00000111050 NeflP08551 543 aa10.23□□□□□ -0.77
Bdnf-209ENSMUST00000111050 Exoc6Q8R313 802 aa10.22□□□□□ -0.77
Bdnf-209ENSMUST00000111050 Eea1Q8BL66 1411 aa10.21□□□□□ -0.78
Bdnf-209ENSMUST00000111050 Fmn1Q05860 1466 aa10.2□□□□□ -0.78
Bdnf-209ENSMUST00000111050 CanxP35564 591 aaKnown RBP10.2□□□□□ -0.78
Bdnf-209ENSMUST00000111050 Zbtb7cQ8VCZ7 619 aa10.2□□□□□ -0.78
Bdnf-209ENSMUST00000111050 Ccdc18Q640L5 1455 aa10.19□□□□□ -0.78
Bdnf-209ENSMUST00000111050 NgefQ8CHT1 710 aa10.19□□□□□ -0.78
Bdnf-209ENSMUST00000111050 Ofd1Q80Z25 1017 aa10.19□□□□□ -0.78
Bdnf-209ENSMUST00000111050 Ncoa2Q61026 1462 aa10.19□□□□□ -0.78
Bdnf-209ENSMUST00000111050 L3mbtl2P59178 703 aa10.18□□□□□ -0.78
Bdnf-209ENSMUST00000111050 Sart3Q9JLI8 962 aaKnown RBP10.18□□□□□ -0.78
Bdnf-209ENSMUST00000111050 TchhA0A0B4J1F9 1599 aa10.18□□□□□ -0.78
Bdnf-209ENSMUST00000111050 Setd5Q5XJV7 1441 aa10.17□□□□□ -0.78
Bdnf-209ENSMUST00000111050 Gtf2a1Q99PM3 378 aa10.17□□□□□ -0.78
Bdnf-209ENSMUST00000111050 Eif4g1Q6NZJ6 1600 aaKnown RBP10.16□□□□□ -0.78
Bdnf-209ENSMUST00000111050 Arhgef5E9Q7D5 1581 aa10.16□□□□□ -0.78
Bdnf-209ENSMUST00000111050 BlmO88700 1416 aa10.16□□□□□ -0.78
Bdnf-209ENSMUST00000111050 DmtnQ9WV69 405 aa10.16□□□□□ -0.78
Bdnf-209ENSMUST00000111050 Ube2uB1AUC4 352 aa10.15□□□□□ -0.78
Bdnf-209ENSMUST00000111050 Gm13695A2AK44 830 aa10.14□□□□□ -0.79
Bdnf-209ENSMUST00000111050 Dhx29Q6PGC1 1365 aaKnown RBP10.13□□□□□ -0.79
Bdnf-209ENSMUST00000111050 AU015836B2RUM3 263 aa10.13□□□□□ -0.79
Bdnf-209ENSMUST00000111050 Lmod2Q3UHZ5 550 aa10.13□□□□□ -0.79
Bdnf-209ENSMUST00000111050 Nkx1-2P42580 305 aa10.13□□□□□ -0.79
Bdnf-209ENSMUST00000111050 Ankrd36D3Z4K0 1415 aa10.13□□□□□ -0.79
Bdnf-209ENSMUST00000111050 Dnttip2Q8R2M2 758 aaKnown RBP10.12□□□□□ -0.79
Bdnf-209ENSMUST00000111050 Sycp2Q9CUU3 1500 aa10.12□□□□□ -0.79
Bdnf-209ENSMUST00000111050 Mroh3A0A1D5RM54 893 aa10.11□□□□□ -0.79
Bdnf-209ENSMUST00000111050 PnisrA2AJT4 805 aaKnown RBP10.11□□□□□ -0.79
Bdnf-209ENSMUST00000111050 Arhgap35Q91YM2 1499 aa10.11□□□□□ -0.79
Bdnf-209ENSMUST00000111050 B4galnt3Q6L8S8 986 aa10.1□□□□□ -0.79
Bdnf-209ENSMUST00000111050 Rrp9Q91WM3 475 aaKnown RBP10.1□□□□□ -0.79
Bdnf-209ENSMUST00000111050 Smarca4Q3TKT4 1613 aaKnown RBP10.1□□□□□ -0.79
Bdnf-209ENSMUST00000111050 Armcx1Q9CX83 456 aa10.09□□□□□ -0.79
Bdnf-209ENSMUST00000111050 Naip5Q9R016 1403 aa10.08□□□□□ -0.8
Bdnf-209ENSMUST00000111050 Ttll13A4Q9F6 804 aa10.08□□□□□ -0.8
Bdnf-209ENSMUST00000111050 Cttnbp2B9EJA2 1648 aa10.08□□□□□ -0.8
Bdnf-209ENSMUST00000111050 Tiam1Q60610 1591 aa10.08□□□□□ -0.8
Bdnf-209ENSMUST00000111050 Camsap2Q8C1B1 1461 aa10.08□□□□□ -0.8
Bdnf-209ENSMUST00000111050 AqrQ8CFQ3 1481 aaKnown RBP10.07□□□□□ -0.8
Bdnf-209ENSMUST00000111050 Dnai1Q8C0M8 701 aa10.07□□□□□ -0.8
Bdnf-209ENSMUST00000111050 Naip1Q9QWK5 1403 aa10.06□□□□□ -0.8
Bdnf-209ENSMUST00000111050 Mre11Q61216 706 aa10.06□□□□□ -0.8
Bdnf-209ENSMUST00000111050 Chrna2Q91X60 512 aa10.05□□□□□ -0.8
Bdnf-209ENSMUST00000111050 Dbr1Q923B1 550 aa10.05□□□□□ -0.8
Bdnf-209ENSMUST00000111050 Fyco1Q8VDC1 1437 aa10.05□□□□□ -0.8
Bdnf-209ENSMUST00000111050 CntlnA2AM05 1397 aa10.05□□□□□ -0.8
Bdnf-209ENSMUST00000111050 Erbb3Q61526 1339 aa10.05□□□□□ -0.8
Bdnf-209ENSMUST00000111050 EprsQ8CGC7 1512 aaKnown RBP10.04□□□□□ -0.8
Bdnf-209ENSMUST00000111050 Fhad1A6PWD2 1420 aa10.04□□□□□ -0.8
Bdnf-209ENSMUST00000111050 Spryd3E9Q9B3 442 aa10.04□□□□□ -0.8
Bdnf-209ENSMUST00000111050 Anp32bQ9EST5 272 aaKnown RBP10.03□□□□□ -0.8
Bdnf-209ENSMUST00000111050 3425401B19RikD3Z1D3 1412 aa10.02□□□□□ -0.8
Bdnf-209ENSMUST00000111050 Ncoa1P70365 1447 aa10.02□□□□□ -0.8
Bdnf-209ENSMUST00000111050 Prkrip1Q9CWV6 186 aaKnown RBP10.02□□□□□ -0.8
Bdnf-209ENSMUST00000111050 Mia2Q91ZV0 1396 aa10.02□□□□□ -0.8
Bdnf-209ENSMUST00000111050 PtprkP35822 1457 aa10.01□□□□□ -0.81
Retrieved 100 of 22,080 RNA–protein pairs in 27.4 ms