RNA–Protein interactions for RNA: ENSMUST00000111045.8

Bdnf-205, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,973 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-205ENSMUST00000111045 Ipo4Q8VI75 1082 aa16.46■□□□□ 0.23
Bdnf-205ENSMUST00000111045 Sycp2Q9CUU3 1500 aa16.45■□□□□ 0.22
Bdnf-205ENSMUST00000111045 Zbtb7cQ8VCZ7 619 aa16.45■□□□□ 0.22
Bdnf-205ENSMUST00000111045 Golga3P55937 1487 aa16.43■□□□□ 0.22
Bdnf-205ENSMUST00000111045 Nolc1E9Q5C9 702 aaKnown RBP16.42■□□□□ 0.22
Bdnf-205ENSMUST00000111045 Lmod3E9QA62 571 aa16.41■□□□□ 0.22
Bdnf-205ENSMUST00000111045 IbspQ61711 324 aa16.41■□□□□ 0.22
Bdnf-205ENSMUST00000111045 Smarca2Q6DIC0 1577 aa16.41■□□□□ 0.22
Bdnf-205ENSMUST00000111045 Zfp777B9EKF4 885 aa16.41■□□□□ 0.22
Bdnf-205ENSMUST00000111045 Cecr2E9Q2Z1 1453 aa16.39■□□□□ 0.21
Bdnf-205ENSMUST00000111045 Ccdc88bQ4QRL3 1481 aa16.38■□□□□ 0.21
Bdnf-205ENSMUST00000111045 Plekhg3Q4VAC9 1341 aa16.36■□□□□ 0.21
Bdnf-205ENSMUST00000111045 Znf326O88291 580 aa16.35■□□□□ 0.21
Bdnf-205ENSMUST00000111045 Crybg2B7ZCC2 1516 aa16.35■□□□□ 0.21
Bdnf-205ENSMUST00000111045 Podxl2Q8CAE9 603 aa16.34■□□□□ 0.21
Bdnf-205ENSMUST00000111045 Dnttip2Q8R2M2 758 aaKnown RBP16.34■□□□□ 0.21
Bdnf-205ENSMUST00000111045 AU015836B2RUM3 263 aa16.32■□□□□ 0.2
Bdnf-205ENSMUST00000111045 Znf692Q3U381 531 aa16.32■□□□□ 0.2
Bdnf-205ENSMUST00000111045 Ube2uB1AUC4 352 aa16.3■□□□□ 0.2
Bdnf-205ENSMUST00000111045 NclP09405 707 aaKnown RBP16.25■□□□□ 0.19
Bdnf-205ENSMUST00000111045 TimelessQ9R1X4 1197 aa16.24■□□□□ 0.19
Bdnf-205ENSMUST00000111045 Tnnt2P50752 301 aa16.23■□□□□ 0.19
Bdnf-205ENSMUST00000111045 Vgll3P85442 326 aa16.22■□□□□ 0.19
Bdnf-205ENSMUST00000111045 AampJ3QN89 436 aa16.19■□□□□ 0.18
Bdnf-205ENSMUST00000111045 Pdcl3Q8BVF2 240 aa16.18■□□□□ 0.18
Bdnf-205ENSMUST00000111045 Armcx1Q9CX83 456 aa16.17■□□□□ 0.18
Bdnf-205ENSMUST00000111045 ArxO35085 564 aa16.16■□□□□ 0.18
Bdnf-205ENSMUST00000111045 Synj1Q8CHC4 1574 aa16.15■□□□□ 0.18
Bdnf-205ENSMUST00000111045 Fam50aQ9WV03 339 aaKnown RBP16.14■□□□□ 0.17
Bdnf-205ENSMUST00000111045 CftrP26361 1476 aa16.14■□□□□ 0.17
Bdnf-205ENSMUST00000111045 Clip1Q922J3 1391 aa16.14■□□□□ 0.17
Bdnf-205ENSMUST00000111045 Rbm10Q99KG3 930 aaKnown RBP16.12■□□□□ 0.17
Bdnf-205ENSMUST00000111045 CanxP35564 591 aaKnown RBP16.12■□□□□ 0.17
Bdnf-205ENSMUST00000111045 Slc4a3P16283 1227 aa16.1■□□□□ 0.17
Bdnf-205ENSMUST00000111045 Trim26Q99PN3 545 aa16.1■□□□□ 0.17
Bdnf-205ENSMUST00000111045 Lmod2Q3UHZ5 550 aa16.09■□□□□ 0.17
Bdnf-205ENSMUST00000111045 Q8BT18 775 aa16.08■□□□□ 0.16
Bdnf-205ENSMUST00000111045 DekQ7TNV0 380 aaKnown RBP16.06■□□□□ 0.16
Bdnf-205ENSMUST00000111045 Eid3Q3V124 375 aa16.06■□□□□ 0.16
Bdnf-205ENSMUST00000111045 DmtnQ9WV69 405 aa16.06■□□□□ 0.16
Bdnf-205ENSMUST00000111045 4933402E13RikQ9D4D2 429 aa16.05■□□□□ 0.16
Bdnf-205ENSMUST00000111045 P3h3Q8CG70 732 aa16.04■□□□□ 0.16
Bdnf-205ENSMUST00000111045 Ipo9Q91YE6 1041 aa16.04■□□□□ 0.16
Bdnf-205ENSMUST00000111045 Npm1Q61937 292 aaKnown RBP16.02■□□□□ 0.16
Bdnf-205ENSMUST00000111045 Spryd3E9Q9B3 442 aa16.02■□□□□ 0.15
Bdnf-205ENSMUST00000111045 Stard8Q8K031 1019 aa16.01■□□□□ 0.15
Bdnf-205ENSMUST00000111045 Trim44Q9QXA7 346 aa16■□□□□ 0.15
Bdnf-205ENSMUST00000111045 Ccer2J3QPU5 274 aa15.99■□□□□ 0.15
Bdnf-205ENSMUST00000111045 Gtf2a1Q99PM3 378 aa15.97■□□□□ 0.15
Bdnf-205ENSMUST00000111045 Fam43aQ8BUP8 424 aa15.96■□□□□ 0.15
Bdnf-205ENSMUST00000111045 Rrp9Q91WM3 475 aaKnown RBP15.96■□□□□ 0.15
Bdnf-205ENSMUST00000111045 AcrbpQ3V140 540 aa15.95■□□□□ 0.14
Bdnf-205ENSMUST00000111045 Pak3Q61036 559 aa15.94■□□□□ 0.14
Bdnf-205ENSMUST00000111045 Kif15Q6P9L6 1387 aa15.91■□□□□ 0.14
Bdnf-205ENSMUST00000111045 ChgaP26339 463 aaKnown RBP15.9■□□□□ 0.14
Bdnf-205ENSMUST00000111045 Cep162Q6ZQ06 1403 aa15.89■□□□□ 0.13
Bdnf-205ENSMUST00000111045 Fmn1Q05860 1466 aa15.89■□□□□ 0.13
Bdnf-205ENSMUST00000111045 Fbxo2Q80UW2 297 aa15.88■□□□□ 0.13
Bdnf-205ENSMUST00000111045 Ubl4bQ9CQ84 188 aa15.88■□□□□ 0.13
Bdnf-205ENSMUST00000111045 Chrna2Q91X60 512 aa15.85■□□□□ 0.13
Bdnf-205ENSMUST00000111045 BicraF8VPZ9 1578 aa15.85■□□□□ 0.13
Bdnf-205ENSMUST00000111045 Smarca4Q3TKT4 1613 aaKnown RBP15.84■□□□□ 0.13
Bdnf-205ENSMUST00000111045 Setd5Q5XJV7 1441 aa15.83■□□□□ 0.12
Bdnf-205ENSMUST00000111045 Plcd3Q8K2J0 785 aa15.82■□□□□ 0.12
Bdnf-205ENSMUST00000111045 Rrp12Q6P5B0 1295 aaKnown RBP15.82■□□□□ 0.12
Bdnf-205ENSMUST00000111045 Rapgef2Q8CHG7 1496 aa15.82■□□□□ 0.12
Bdnf-205ENSMUST00000111045 Cttnbp2B9EJA2 1648 aa15.81■□□□□ 0.12
Bdnf-205ENSMUST00000111045 Vsig10D3YX43 558 aa15.8■□□□□ 0.12
Bdnf-205ENSMUST00000111045 BlmO88700 1416 aa15.76■□□□□ 0.11
Bdnf-205ENSMUST00000111045 Tcerg1Q8CGF7 1100 aaKnown RBP15.76■□□□□ 0.11
Bdnf-205ENSMUST00000111045 Mrs2Q5NCE8 434 aa15.75■□□□□ 0.11
Bdnf-205ENSMUST00000111045 NgefQ8CHT1 710 aa15.75■□□□□ 0.11
Bdnf-205ENSMUST00000111045 Pds5bQ4VA53 1446 aaKnown RBP15.74■□□□□ 0.11
Bdnf-205ENSMUST00000111045 Eea1Q8BL66 1411 aa15.72■□□□□ 0.11
Bdnf-205ENSMUST00000111045 Cc2d2aQ8CFW7 1633 aa15.71■□□□□ 0.11
Bdnf-205ENSMUST00000111045 Scaf1Q5U4C3 1256 aaKnown RBP15.71■□□□□ 0.11
Bdnf-205ENSMUST00000111045 Zfp91Q62511 572 aa15.71■□□□□ 0.11
Bdnf-205ENSMUST00000111045 Htatsf1Q8BGC0 757 aa15.71■□□□□ 0.11
Bdnf-205ENSMUST00000111045 Atad2bE9Q166 1460 aaKnown RBP15.7■□□□□ 0.1
Bdnf-205ENSMUST00000111045 Aebp1Q640N1 1128 aa15.69■□□□□ 0.1
Bdnf-205ENSMUST00000111045 Ercc6F8VPZ5 1481 aa15.68■□□□□ 0.1
Bdnf-205ENSMUST00000111045 Iqcf3Q9D498 203 aa15.68■□□□□ 0.1
Bdnf-205ENSMUST00000111045 Iqgap2Q3UQ44 1575 aa15.67■□□□□ 0.1
Bdnf-205ENSMUST00000111045 Znf710Q3U288 666 aa15.63■□□□□ 0.09
Bdnf-205ENSMUST00000111045 Chic2Q9D9G3 165 aa15.63■□□□□ 0.09
Bdnf-205ENSMUST00000111045 Hsp90ab1P11499 724 aaKnown RBP15.62■□□□□ 0.09
Bdnf-205ENSMUST00000111045 Ppm1gQ61074 542 aa15.62■□□□□ 0.09
Bdnf-205ENSMUST00000111045 Dnai1Q8C0M8 701 aa15.62■□□□□ 0.09
Bdnf-205ENSMUST00000111045 Chmp4bQ9D8B3 224 aaKnown RBP15.62■□□□□ 0.09
Bdnf-205ENSMUST00000111045 Ccdc18Q640L5 1455 aa15.62■□□□□ 0.09
Bdnf-205ENSMUST00000111045 Arid4aF8VPQ2 1261 aaKnown RBP15.61■□□□□ 0.09
Bdnf-205ENSMUST00000111045 BbxQ8VBW5 907 aa15.61■□□□□ 0.09
Bdnf-205ENSMUST00000111045 Dusp27Q148W8 1138 aa15.61■□□□□ 0.09
Bdnf-205ENSMUST00000111045 Tshz2Q68FE9 1030 aa15.61■□□□□ 0.09
Bdnf-205ENSMUST00000111045 Trim30dE9PWL0 497 aa15.6■□□□□ 0.09
Bdnf-205ENSMUST00000111045 Plcb2A3KGF7 1181 aa15.6■□□□□ 0.09
Bdnf-205ENSMUST00000111045 B4galnt3Q6L8S8 986 aa15.59■□□□□ 0.09
Bdnf-205ENSMUST00000111045 Kiaa1211Q5PR69 1207 aa15.58■□□□□ 0.09
Bdnf-205ENSMUST00000111045 Sart3Q9JLI8 962 aaKnown RBP15.58■□□□□ 0.08
Bdnf-205ENSMUST00000111045 Top2bQ64511 1612 aa15.57■□□□□ 0.08
Retrieved 100 of 22,080 RNA–protein pairs in 84.9 ms