RNA–Protein interactions for RNA: ENSMUST00000110647.7

Trp53bp1-201, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trp53bp1, Length 9,405 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trp53bp1-201ENSMUST00000110647 Mier1Q5UAK0 511 aa8.41□□□□□ -1.06
Trp53bp1-201ENSMUST00000110647 Zbtb4Q5F293 982 aa8.4□□□□□ -1.06
Trp53bp1-201ENSMUST00000110647 Gm973E9Q295 1059 aa8.4□□□□□ -1.06
Trp53bp1-201ENSMUST00000110647 Cep164Q5DU05 1446 aa8.4□□□□□ -1.06
Trp53bp1-201ENSMUST00000110647 Gm6268A2A3U9 297 aa8.4□□□□□ -1.07
Trp53bp1-201ENSMUST00000110647 Exosc9Q9JHI7 438 aaKnown RBP8.4□□□□□ -1.07
Trp53bp1-201ENSMUST00000110647 Rsf1E9PWW9 1441 aaKnown RBP8.4□□□□□ -1.07
Trp53bp1-201ENSMUST00000110647 Map7O88735 730 aa8.4□□□□□ -1.07
Trp53bp1-201ENSMUST00000110647 DekQ7TNV0 380 aaKnown RBP8.39□□□□□ -1.07
Trp53bp1-201ENSMUST00000110647 PtmsQ9D0J8 101 aaKnown RBP8.39□□□□□ -1.07
Trp53bp1-201ENSMUST00000110647 Mapk8ip3Q9ESN9 1337 aa8.39□□□□□ -1.07
Trp53bp1-201ENSMUST00000110647 NudcO35685 332 aaKnown RBP8.38□□□□□ -1.07
Trp53bp1-201ENSMUST00000110647 Arid4bA2CG63 1314 aaKnown RBP8.37□□□□□ -1.07
Trp53bp1-201ENSMUST00000110647 Pes1Q9EQ61 584 aaKnown RBP8.37□□□□□ -1.07
Trp53bp1-201ENSMUST00000110647 Srpk2O54781 681 aaKnown RBP8.37□□□□□ -1.07
Trp53bp1-201ENSMUST00000110647 Htatsf1Q8BGC0 757 aa8.37□□□□□ -1.07
Trp53bp1-201ENSMUST00000110647 Calcoco2A2A6M5 331 aa8.35□□□□□ -1.07
Trp53bp1-201ENSMUST00000110647 Abcc8B2RUS7 1588 aa8.35□□□□□ -1.07
Trp53bp1-201ENSMUST00000110647 Cwc22Q8C5N3 908 aaKnown RBP8.35□□□□□ -1.07
Trp53bp1-201ENSMUST00000110647 BlmO88700 1416 aa8.34□□□□□ -1.07
Trp53bp1-201ENSMUST00000110647 MccE9PWI3 1003 aa8.34□□□□□ -1.07
Trp53bp1-201ENSMUST00000110647 Calr4Q3TQS0 420 aa8.33□□□□□ -1.08
Trp53bp1-201ENSMUST00000110647 Wwc2Q6NXJ0 1187 aa8.32□□□□□ -1.08
Trp53bp1-201ENSMUST00000110647 Tpm3-rs7D3Z2H9 248 aa8.32□□□□□ -1.08
Trp53bp1-201ENSMUST00000110647 Nol10Q5RJG1 687 aaKnown RBP8.32□□□□□ -1.08
Trp53bp1-201ENSMUST00000110647 Mtus2Q3UHD3 1353 aa8.31□□□□□ -1.08
Trp53bp1-201ENSMUST00000110647 HnrnpuQ8VEK3 800 aaKnown RBP8.31□□□□□ -1.08
Trp53bp1-201ENSMUST00000110647 ArxO35085 564 aa8.31□□□□□ -1.08
Trp53bp1-201ENSMUST00000110647 PtmaP26350 111 aa8.3□□□□□ -1.08
Trp53bp1-201ENSMUST00000110647 MyclP10166 368 aa8.3□□□□□ -1.08
Trp53bp1-201ENSMUST00000110647 NacadQ5SWP3 1504 aa8.3□□□□□ -1.08
Trp53bp1-201ENSMUST00000110647 Mbd3Q9Z2D8 285 aaKnown RBP8.29□□□□□ -1.08
Trp53bp1-201ENSMUST00000110647 Casc1Q6TDU8 730 aa8.29□□□□□ -1.08
Trp53bp1-201ENSMUST00000110647 Hsp90ab1P11499 724 aaKnown RBP8.29□□□□□ -1.08
Trp53bp1-201ENSMUST00000110647 KnstrnQ9D9Z1 312 aaKnown RBP8.29□□□□□ -1.08
Trp53bp1-201ENSMUST00000110647 Mroh3A0A1D5RM54 893 aa8.28□□□□□ -1.08
Trp53bp1-201ENSMUST00000110647 Mia2Q91ZV0 1396 aa8.28□□□□□ -1.08
Trp53bp1-201ENSMUST00000110647 Setd5Q5XJV7 1441 aa8.28□□□□□ -1.08
Trp53bp1-201ENSMUST00000110647 Ggt6Q6PDE7 497 aa8.27□□□□□ -1.09
Trp53bp1-201ENSMUST00000110647 Sart3Q9JLI8 962 aaKnown RBP8.27□□□□□ -1.09
Trp53bp1-201ENSMUST00000110647 Fhad1A6PWD2 1420 aa8.27□□□□□ -1.09
Trp53bp1-201ENSMUST00000110647 Wdr43Q6ZQL4 677 aaKnown RBP8.26□□□□□ -1.09
Trp53bp1-201ENSMUST00000110647 Trim30dE9PWL0 497 aa8.26□□□□□ -1.09
Trp53bp1-201ENSMUST00000110647 Aplp2Q06335 707 aa8.25□□□□□ -1.09
Trp53bp1-201ENSMUST00000110647 Sh3bp5Q9Z131 463 aa8.25□□□□□ -1.09
Trp53bp1-201ENSMUST00000110647 Ppm1gQ61074 542 aa8.25□□□□□ -1.09
Trp53bp1-201ENSMUST00000110647 Eea1Q8BL66 1411 aa8.25□□□□□ -1.09
Trp53bp1-201ENSMUST00000110647 Kif15Q6P9L6 1387 aa8.24□□□□□ -1.09
Trp53bp1-201ENSMUST00000110647 Rad21Q61550 635 aaKnown RBP8.23□□□□□ -1.09
Trp53bp1-201ENSMUST00000110647 Dcaf1Q80TR8 1506 aa8.23□□□□□ -1.09
Trp53bp1-201ENSMUST00000110647 Rtf1A2AQ19 715 aaKnown RBP8.23□□□□□ -1.09
Trp53bp1-201ENSMUST00000110647 Stag3O70576 1240 aa8.23□□□□□ -1.09
Trp53bp1-201ENSMUST00000110647 Gm20521D3Z5F7 333 aa8.23□□□□□ -1.09
Trp53bp1-201ENSMUST00000110647 Anapc15P60007 132 aa8.23□□□□□ -1.09
Trp53bp1-201ENSMUST00000110647 Mrs2Q5NCE8 434 aa8.23□□□□□ -1.09
Trp53bp1-201ENSMUST00000110647 Noc3lQ8VI84 807 aaKnown RBP8.22□□□□□ -1.09
Trp53bp1-201ENSMUST00000110647 Ddx11Q6AXC6 880 aa8.22□□□□□ -1.09
Trp53bp1-201ENSMUST00000110647 R3hcc1Q8BSI6 488 aa8.22□□□□□ -1.09
Trp53bp1-201ENSMUST00000110647 Map7d2A2AG50 781 aa8.22□□□□□ -1.09
Trp53bp1-201ENSMUST00000110647 Lmod3E9QA62 571 aa8.22□□□□□ -1.09
Trp53bp1-201ENSMUST00000110647 Rangap1P46061 589 aaKnown RBP8.22□□□□□ -1.09
Trp53bp1-201ENSMUST00000110647 Spag9Q58A65 1321 aaKnown RBP8.21□□□□□ -1.09
Trp53bp1-201ENSMUST00000110647 Hmgb2P30681 210 aaKnown RBP8.21□□□□□ -1.1
Trp53bp1-201ENSMUST00000110647 Mak16Q8BGS0 296 aaKnown RBP8.2□□□□□ -1.1
Trp53bp1-201ENSMUST00000110647 SetQ9EQU5 289 aaKnown RBP8.2□□□□□ -1.1
Trp53bp1-201ENSMUST00000110647 Ccdc47Q9D024 483 aaKnown RBP8.2□□□□□ -1.1
Trp53bp1-201ENSMUST00000110647 Chic2Q9D9G3 165 aa8.2□□□□□ -1.1
Trp53bp1-201ENSMUST00000110647 Clstn1Q9EPL2 979 aa8.2□□□□□ -1.1
Trp53bp1-201ENSMUST00000110647 Rgl3Q3UYI5 709 aa8.19□□□□□ -1.1
Trp53bp1-201ENSMUST00000110647 Hsp90b1P08113 802 aaKnown RBP8.19□□□□□ -1.1
Trp53bp1-201ENSMUST00000110647 CanxP35564 591 aaKnown RBP8.18□□□□□ -1.1
Trp53bp1-201ENSMUST00000110647 Ppp4r2Q0VGB7 417 aa8.18□□□□□ -1.1
Trp53bp1-201ENSMUST00000110647 Cald1E9QA15 768 aaKnown RBP8.18□□□□□ -1.1
Trp53bp1-201ENSMUST00000110647 Smarce1O54941 411 aaKnown RBP8.18□□□□□ -1.1
Trp53bp1-201ENSMUST00000110647 Rab11fip3Q8CHD8 1047 aa8.18□□□□□ -1.1
Trp53bp1-201ENSMUST00000110647 Ppargc1bQ8VHJ7 1014 aa8.18□□□□□ -1.1
Trp53bp1-201ENSMUST00000110647 Rassf8Q8CJ96 419 aa8.18□□□□□ -1.1
Trp53bp1-201ENSMUST00000110647 Baz1aO88379 1555 aa8.17□□□□□ -1.1
Trp53bp1-201ENSMUST00000110647 Eid3Q3V124 375 aa8.17□□□□□ -1.1
Trp53bp1-201ENSMUST00000110647 Ppp1r18Q8BQ30 594 aa8.17□□□□□ -1.1
Trp53bp1-201ENSMUST00000110647 Kdm2aP59997 1161 aa8.17□□□□□ -1.1
Trp53bp1-201ENSMUST00000110647 Irx6Q9ER75 438 aa8.17□□□□□ -1.1
Trp53bp1-201ENSMUST00000110647 Card11Q8CIS0 1159 aa8.17□□□□□ -1.1
Trp53bp1-201ENSMUST00000110647 Stard8Q8K031 1019 aa8.17□□□□□ -1.1
Trp53bp1-201ENSMUST00000110647 Rtn4Q99P72 1162 aaKnown RBP8.17□□□□□ -1.1
Trp53bp1-201ENSMUST00000110647 Grwd1Q810D6 446 aaKnown RBP8.17□□□□□ -1.1
Trp53bp1-201ENSMUST00000110647 Tpm4Q6IRU2 248 aa8.16□□□□□ -1.1
Trp53bp1-201ENSMUST00000110647 Trim26Q99PN3 545 aa8.16□□□□□ -1.1
Trp53bp1-201ENSMUST00000110647 Dhx57Q6P5D3 1388 aaKnown RBP8.15□□□□□ -1.1
Trp53bp1-201ENSMUST00000110647 NgefQ8CHT1 710 aa8.14□□□□□ -1.11
Trp53bp1-201ENSMUST00000110647 Plcb2A3KGF7 1181 aa8.13□□□□□ -1.11
Trp53bp1-201ENSMUST00000110647 Ofd1Q80Z25 1017 aa8.13□□□□□ -1.11
Trp53bp1-201ENSMUST00000110647 A0A1L1SQF0 893 aa8.13□□□□□ -1.11
Trp53bp1-201ENSMUST00000110647 Arhgap27A2AB59 869 aa8.13□□□□□ -1.11
Trp53bp1-201ENSMUST00000110647 Odf2A3KGV1 830 aaKnown RBP8.13□□□□□ -1.11
Trp53bp1-201ENSMUST00000110647 Atp6v1dP57746 247 aa8.13□□□□□ -1.11
Trp53bp1-201ENSMUST00000110647 Pds5bQ4VA53 1446 aaKnown RBP8.13□□□□□ -1.11
Trp53bp1-201ENSMUST00000110647 Slc4a1apE9PX68 744 aa8.12□□□□□ -1.11
Trp53bp1-201ENSMUST00000110647 Iffo2Q8R2V2 512 aa8.12□□□□□ -1.11
Trp53bp1-201ENSMUST00000110647 Tpm2P58774 284 aa8.12□□□□□ -1.11
Retrieved 100 of 22,080 RNA–protein pairs in 27.9 ms