RNA–Protein interactions for RNA: ENSMUST00000107938.7

Shank1-203, Transcript of SH3 and multiple ankyrin repeat domains protein 1, mousemouse

APPRIS P2 TSL 5 BASIC

Gene Shank1, Length 9,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1-203ENSMUST00000107938 Ccer2J3QPU5 274 aa20,48■□□□□ 0,87
Shank1-203ENSMUST00000107938 Gtf3c3Q3TMP1 882 aa20,47■□□□□ 0,87
Shank1-203ENSMUST00000107938 Casc1Q6TDU8 730 aa20,43■□□□□ 0,86
Shank1-203ENSMUST00000107938 Trim30dE9PWL0 497 aa20,43■□□□□ 0,86
Shank1-203ENSMUST00000107938 RdxP26043 583 aaKnown RBP20,42■□□□□ 0,86
Shank1-203ENSMUST00000107938 Dnttip2Q8R2M2 758 aaKnown RBP20,41■□□□□ 0,86
Shank1-203ENSMUST00000107938 Gm38655A0A286YDK6 273 aa20,4■□□□□ 0,86
Shank1-203ENSMUST00000107938 Plcb2A3KGF7 1181 aa20,4■□□□□ 0,86
Shank1-203ENSMUST00000107938 Podxl2Q8CAE9 603 aa20,39■□□□□ 0,86
Shank1-203ENSMUST00000107938 Mbd3Q9Z2D8 285 aaKnown RBP20,38■□□□□ 0,85
Shank1-203ENSMUST00000107938 Cald1E9QA15 768 aaKnown RBP20,38■□□□□ 0,85
Shank1-203ENSMUST00000107938 Map7O88735 730 aa20,38■□□□□ 0,85
Shank1-203ENSMUST00000107938 Fbxo2Q80UW2 297 aa20,37■□□□□ 0,85
Shank1-203ENSMUST00000107938 Chmp4bQ9D8B3 224 aaKnown RBP20,36■□□□□ 0,85
Shank1-203ENSMUST00000107938 VgfQ0VGU4 617 aa20,35■□□□□ 0,85
Shank1-203ENSMUST00000107938 PnnO35691 725 aaKnown RBP20,32■□□□□ 0,84
Shank1-203ENSMUST00000107938 Becn1O88597 448 aa20,32■□□□□ 0,84
Shank1-203ENSMUST00000107938 Erich6bQ9D4S6 220 aa20,31■□□□□ 0,84
Shank1-203ENSMUST00000107938 Ppargc1bQ8VHJ7 1014 aa20,3■□□□□ 0,84
Shank1-203ENSMUST00000107938 Pdcl3Q8BVF2 240 aa20,29■□□□□ 0,84
Shank1-203ENSMUST00000107938 Ush1cQ9ES64 910 aa20,28■□□□□ 0,84
Shank1-203ENSMUST00000107938 Sall2Q9QX96 1004 aa20,25■□□□□ 0,83
Shank1-203ENSMUST00000107938 Vsig10D3YX43 558 aa20,24■□□□□ 0,83
Shank1-203ENSMUST00000107938 Zrsr2Q62377 462 aaKnown RBP20,24■□□□□ 0,83
Shank1-203ENSMUST00000107938 Cwc15Q9JHS9 229 aaKnown RBP20,24■□□□□ 0,83
Shank1-203ENSMUST00000107938 Hsp90b1P08113 802 aaKnown RBP20,21■□□□□ 0,83
Shank1-203ENSMUST00000107938 Fam43aQ8BUP8 424 aa20,17■□□□□ 0,82
Shank1-203ENSMUST00000107938 Trim26Q99PN3 545 aa20,17■□□□□ 0,82
Shank1-203ENSMUST00000107938 Rrp9Q91WM3 475 aaKnown RBP20,16■□□□□ 0,82
Shank1-203ENSMUST00000107938 Trim30aP15533 496 aa20,16■□□□□ 0,82
Shank1-203ENSMUST00000107938 Taok2Q6ZQ29 1240 aa20,15■□□□□ 0,82
Shank1-203ENSMUST00000107938 Ftsj3Q9DBE9 838 aaKnown RBP20,15■□□□□ 0,82
Shank1-203ENSMUST00000107938 Hmgb1P63158 215 aaKnown RBP20,13■□□□□ 0,81
Shank1-203ENSMUST00000107938 AppP12023 770 aa20,11■□□□□ 0,81
Shank1-203ENSMUST00000107938 Kiaa0754Q69ZZ9 979 aa20,11■□□□□ 0,81
Shank1-203ENSMUST00000107938 Cspp1B2RX88 1205 aa20,11■□□□□ 0,81
Shank1-203ENSMUST00000107938 Wwc2Q6NXJ0 1187 aa20,1■□□□□ 0,81
Shank1-203ENSMUST00000107938 Tcerg1Q8CGF7 1100 aaKnown RBP20,1■□□□□ 0,81
Shank1-203ENSMUST00000107938 Ipo9Q91YE6 1041 aa20,09■□□□□ 0,81
Shank1-203ENSMUST00000107938 Dnai1Q8C0M8 701 aa20,09■□□□□ 0,81
Shank1-203ENSMUST00000107938 Mapk8ip2Q9ERE9 830 aa20,08■□□□□ 0,8
Shank1-203ENSMUST00000107938 Gtf3c5Q8R2T8 520 aa20,08■□□□□ 0,8
Shank1-203ENSMUST00000107938 KnstrnQ9D9Z1 312 aaKnown RBP20,07■□□□□ 0,8
Shank1-203ENSMUST00000107938 Cep164Q5DU05 1446 aa20,07■□□□□ 0,8
Shank1-203ENSMUST00000107938 Ccdc34Q3UI66 367 aa20,07■□□□□ 0,8
Shank1-203ENSMUST00000107938 Glipr1l2Q9CQ35 332 aa20,07■□□□□ 0,8
Shank1-203ENSMUST00000107938 Sycp1Q62209 993 aa20,06■□□□□ 0,8
Shank1-203ENSMUST00000107938 Taf3Q5HZG4 932 aa20,04■□□□□ 0,8
Shank1-203ENSMUST00000107938 Mrvi1Q9WUX5 899 aaKnown RBP20,04■□□□□ 0,8
Shank1-203ENSMUST00000107938 MccE9PWI3 1003 aa20,03■□□□□ 0,8
Shank1-203ENSMUST00000107938 Chaf1aQ9QWF0 911 aa20,03■□□□□ 0,8
Shank1-203ENSMUST00000107938 Anp32eP97822 260 aaKnown RBP20,03■□□□□ 0,8
Shank1-203ENSMUST00000107938 Mrs2Q5NCE8 434 aa20■□□□□ 0,79
Shank1-203ENSMUST00000107938 Fgd1P52734 960 aa20■□□□□ 0,79
Shank1-203ENSMUST00000107938 Tpm2P58774 284 aa19,98■□□□□ 0,79
Shank1-203ENSMUST00000107938 Tpm3-rs7D3Z2H9 248 aa19,94■□□□□ 0,78
Shank1-203ENSMUST00000107938 Pes1Q9EQ61 584 aaKnown RBP19,93■□□□□ 0,78
Shank1-203ENSMUST00000107938 Dctn1O08788 1281 aa19,92■□□□□ 0,78
Shank1-203ENSMUST00000107938 Mapk8ip3Q9ESN9 1337 aa19,91■□□□□ 0,78
Shank1-203ENSMUST00000107938 Gps2Q921N8 327 aa19,89■□□□□ 0,77
Shank1-203ENSMUST00000107938 Ap3b1Q9Z1T1 1105 aa19,89■□□□□ 0,77
Shank1-203ENSMUST00000107938 Znf771Q8BJ90 317 aa19,88■□□□□ 0,77
Shank1-203ENSMUST00000107938 Ralbp1Q62172 648 aa19,87■□□□□ 0,77
Shank1-203ENSMUST00000107938 Tpm3P21107 285 aaKnown RBP19,87■□□□□ 0,77
Shank1-203ENSMUST00000107938 Pde3bQ61409 1100 aa19,87■□□□□ 0,77
Shank1-203ENSMUST00000107938 Ofd1Q80Z25 1017 aa19,87■□□□□ 0,77
Shank1-203ENSMUST00000107938 Trim55G3X8Y1 545 aa19,84■□□□□ 0,77
Shank1-203ENSMUST00000107938 R3hcc1Q8BSI6 488 aa19,83■□□□□ 0,76
Shank1-203ENSMUST00000107938 Kif3aP28741 701 aa19,82■□□□□ 0,76
Shank1-203ENSMUST00000107938 Ppm1eQ80TL0 749 aa19,81■□□□□ 0,76
Shank1-203ENSMUST00000107938 Atp6v1dP57746 247 aa19,8■□□□□ 0,76
Shank1-203ENSMUST00000107938 Zbtb7cQ8VCZ7 619 aa19,8■□□□□ 0,76
Shank1-203ENSMUST00000107938 Smarce1O54941 411 aaKnown RBP19,78■□□□□ 0,76
Shank1-203ENSMUST00000107938 Zfp777B9EKF4 885 aa19,78■□□□□ 0,76
Shank1-203ENSMUST00000107938 Mre11Q61216 706 aa19,78■□□□□ 0,76
Shank1-203ENSMUST00000107938 Zcchc6Q5BLK4 1491 aaKnown RBP19,76■□□□□ 0,75
Shank1-203ENSMUST00000107938 Rtn4Q99P72 1162 aaKnown RBP19,76■□□□□ 0,75
Shank1-203ENSMUST00000107938 Def6Q8C2K1 630 aa19,76■□□□□ 0,75
Shank1-203ENSMUST00000107938 Supt16hQ920B9 1047 aa19,76■□□□□ 0,75
Shank1-203ENSMUST00000107938 EspnQ9ET47 871 aa19,75■□□□□ 0,75
Shank1-203ENSMUST00000107938 Hap1O35668 628 aa19,74■□□□□ 0,75
Shank1-203ENSMUST00000107938 Gtf2a1Q99PM3 378 aa19,74■□□□□ 0,75
Shank1-203ENSMUST00000107938 Rsph3aQ3UFY4 516 aa19,73■□□□□ 0,75
Shank1-203ENSMUST00000107938 Ccdc173A0JLY1 547 aa19,73■□□□□ 0,75
Shank1-203ENSMUST00000107938 Kif3cO35066 796 aa19,73■□□□□ 0,75
Shank1-203ENSMUST00000107938 Sparcl1P70663 650 aa19,73■□□□□ 0,75
Shank1-203ENSMUST00000107938 Rad21Q61550 635 aaKnown RBP19,73■□□□□ 0,75
Shank1-203ENSMUST00000107938 Ipo4Q8VI75 1082 aa19,72■□□□□ 0,75
Shank1-203ENSMUST00000107938 Arid4bA2CG63 1314 aaKnown RBP19,71■□□□□ 0,75
Shank1-203ENSMUST00000107938 Znhit6Q3UFB2 460 aaKnown RBP19,71■□□□□ 0,75
Shank1-203ENSMUST00000107938 HnrnpuQ8VEK3 800 aaKnown RBP19,7■□□□□ 0,74
Shank1-203ENSMUST00000107938 EzrP26040 586 aaKnown RBP19,68■□□□□ 0,74
Shank1-203ENSMUST00000107938 Dhx8A2A4P0 1244 aaKnown RBP19,68■□□□□ 0,74
Shank1-203ENSMUST00000107938 Tpm1P58771 284 aa19,68■□□□□ 0,74
Shank1-203ENSMUST00000107938 Isy1Q69ZQ2 285 aaKnown RBP19,67■□□□□ 0,74
Shank1-203ENSMUST00000107938 Cwc22Q8C5N3 908 aaKnown RBP19,66■□□□□ 0,74
Shank1-203ENSMUST00000107938 Trap1aP19473 224 aa19,65■□□□□ 0,74
Shank1-203ENSMUST00000107938 Clip1Q922J3 1391 aa19,65■□□□□ 0,74
Shank1-203ENSMUST00000107938 Rufy1Q8BIJ7 712 aa19,64■□□□□ 0,74
Shank1-203ENSMUST00000107938 Paf1Q8K2T8 535 aa19,64■□□□□ 0,73
Retrieved 100 of 22,080 RNA–protein pairs in 28 ms