RNA–Protein interactions for RNA: ENSMUST00000107938.7

Shank1-203, Transcript of SH3 and multiple ankyrin repeat domains protein 1, mousemouse

APPRIS P2 TSL 5 BASIC

Gene Shank1, Length 9,826 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1-203ENSMUST00000107938 Rpgrip1Q9EPQ2 1331 aa27.12■■□□□ 1.93
Shank1-203ENSMUST00000107938 Cngb1E1AZ71 1325 aa26.85■■□□□ 1.89
Shank1-203ENSMUST00000107938 Las1lA2BE28 776 aaKnown RBP26.78■■□□□ 1.88
Shank1-203ENSMUST00000107938 Pelp1Q9DBD5 1123 aaKnown RBP26.35■■□□□ 1.81
Shank1-203ENSMUST00000107938 Myt1Q8CFC2 1127 aa25.49■■□□□ 1.67
Shank1-203ENSMUST00000107938 Amer1Q7TS75 1132 aa25.19■■□□□ 1.62
Shank1-203ENSMUST00000107938 Wdr66E9Q743 1299 aa25.15■■□□□ 1.62
Shank1-203ENSMUST00000107938 Rhox8Q6VSS7 320 aa25.02■■□□□ 1.6
Shank1-203ENSMUST00000107938 4930567H17RikQ3V0K5 233 aa24.9■■□□□ 1.58
Shank1-203ENSMUST00000107938 CenpbP27790 599 aa24.87■■□□□ 1.57
Shank1-203ENSMUST00000107938 Rtl1Q7M732 1744 aa24.26■■□□□ 1.47
Shank1-203ENSMUST00000107938 Stra8P70278 393 aa24.13■■□□□ 1.45
Shank1-203ENSMUST00000107938 Rtl5Q5DTT4 599 aa23.88■■□□□ 1.41
Shank1-203ENSMUST00000107938 DiexfQ8BTT6 772 aaKnown RBP23.79■■□□□ 1.4
Shank1-203ENSMUST00000107938 Ccdc180J3QNE4 1664 aa23.48■■□□□ 1.35
Shank1-203ENSMUST00000107938 Ythdc1E9Q5K9 736 aaKnown RBP23.47■■□□□ 1.35
Shank1-203ENSMUST00000107938 Tnnt3Q9QZ47 272 aa23.44■■□□□ 1.34
Shank1-203ENSMUST00000107938 Acin1Q9JIX8 1338 aaKnown RBP23.43■■□□□ 1.34
Shank1-203ENSMUST00000107938 Zeb1Q64318 1117 aa23.42■■□□□ 1.34
Shank1-203ENSMUST00000107938 4933416C03RikQ3V063 378 aa23.38■■□□□ 1.33
Shank1-203ENSMUST00000107938 NefmP08553 848 aa23.36■■□□□ 1.33
Shank1-203ENSMUST00000107938 Ttbk1Q6PCN3 1308 aa23.33■■□□□ 1.33
Shank1-203ENSMUST00000107938 Ehmt2Q9Z148 1263 aaKnown RBP23.04■■□□□ 1.28
Shank1-203ENSMUST00000107938 Cdk11bP24788 784 aaKnown RBP22.94■■□□□ 1.26
Shank1-203ENSMUST00000107938 NeflP08551 543 aa22.9■■□□□ 1.26
Shank1-203ENSMUST00000107938 Ccdc9Q8VC31 543 aaKnown RBP22.84■■□□□ 1.25
Shank1-203ENSMUST00000107938 Ube2uB1AUC4 352 aa22.73■■□□□ 1.23
Shank1-203ENSMUST00000107938 Pcgf6Q99NA9 353 aa22.53■■□□□ 1.2
Shank1-203ENSMUST00000107938 Anp32bQ9EST5 272 aaKnown RBP22.49■■□□□ 1.19
Shank1-203ENSMUST00000107938 HrcG5E8J6 738 aa22.46■■□□□ 1.19
Shank1-203ENSMUST00000107938 Anp32aO35381 247 aa22.42■■□□□ 1.18
Shank1-203ENSMUST00000107938 Nop58Q6DFW4 536 aaKnown RBP22.4■■□□□ 1.18
Shank1-203ENSMUST00000107938 NrdcQ8BHG1 1161 aa22.36■■□□□ 1.17
Shank1-203ENSMUST00000107938 Neurod1Q60867 357 aa22.35■■□□□ 1.17
Shank1-203ENSMUST00000107938 Myt1lP97500 1187 aa22.27■■□□□ 1.16
Shank1-203ENSMUST00000107938 DaxxO35613 739 aa22.2■■□□□ 1.14
Shank1-203ENSMUST00000107938 CatipB9EKE5 520 aa22.12■■□□□ 1.13
Shank1-203ENSMUST00000107938 Slc24a1Q91WD8 1130 aa22.1■■□□□ 1.13
Shank1-203ENSMUST00000107938 Trim41Q5NCC3 630 aa22.05■■□□□ 1.12
Shank1-203ENSMUST00000107938 Aplp2Q06335 707 aa21.99■■□□□ 1.11
Shank1-203ENSMUST00000107938 Npm2Q80W85 207 aa21.85■■□□□ 1.09
Shank1-203ENSMUST00000107938 Esf1Q3V1V3 845 aaKnown RBP21.76■■□□□ 1.07
Shank1-203ENSMUST00000107938 Upf2A2AT37 1269 aaKnown RBP21.75■■□□□ 1.07
Shank1-203ENSMUST00000107938 Hsp90aa1P07901 733 aaKnown RBP21.69■■□□□ 1.06
Shank1-203ENSMUST00000107938 Polr3glQ8R0C0 218 aa21.68■■□□□ 1.06
Shank1-203ENSMUST00000107938 Anks4bQ8K3X6 423 aa21.67■■□□□ 1.06
Shank1-203ENSMUST00000107938 ClspnQ80YR7 1315 aa21.67■■□□□ 1.06
Shank1-203ENSMUST00000107938 Adam1bQ8R534 806 aa21.6■■□□□ 1.05
Shank1-203ENSMUST00000107938 Supt5hO55201 1082 aaKnown RBP21.59■■□□□ 1.05
Shank1-203ENSMUST00000107938 Eif5bQ05D44 1216 aaKnown RBP21.58■■□□□ 1.05
Shank1-203ENSMUST00000107938 NclP09405 707 aaKnown RBP21.58■■□□□ 1.05
Shank1-203ENSMUST00000107938 Tnnt2P50752 301 aa21.56■■□□□ 1.04
Shank1-203ENSMUST00000107938 Gab3Q8BSM5 595 aa21.56■■□□□ 1.04
Shank1-203ENSMUST00000107938 UbtfP25976 765 aaKnown RBP21.55■■□□□ 1.04
Shank1-203ENSMUST00000107938 TonslQ6NZL6 1363 aa21.53■■□□□ 1.04
Shank1-203ENSMUST00000107938 Ccdc136Q3TVA9 1136 aa21.53■■□□□ 1.04
Shank1-203ENSMUST00000107938 Trim44Q9QXA7 346 aa21.49■■□□□ 1.03
Shank1-203ENSMUST00000107938 Bcl11aQ9QYE3 773 aa21.47■■□□□ 1.03
Shank1-203ENSMUST00000107938 Irx3P81067 507 aa21.35■■□□□ 1.01
Shank1-203ENSMUST00000107938 Ccdc27Q3V036 639 aa21.35■■□□□ 1.01
Shank1-203ENSMUST00000107938 Lmod3E9QA62 571 aa21.32■■□□□ 1
Shank1-203ENSMUST00000107938 Znf326O88291 580 aa21.24■□□□□ 0.99
Shank1-203ENSMUST00000107938 Htatsf1Q8BGC0 757 aa21.21■□□□□ 0.99
Shank1-203ENSMUST00000107938 Rangap1P46061 589 aaKnown RBP21.17■□□□□ 0.98
Shank1-203ENSMUST00000107938 Map7d2A2AG50 781 aa21.15■□□□□ 0.98
Shank1-203ENSMUST00000107938 Csrnp3P59055 597 aa21.14■□□□□ 0.97
Shank1-203ENSMUST00000107938 Calcoco2A2A6M5 331 aa21.13■□□□□ 0.97
Shank1-203ENSMUST00000107938 AU015836B2RUM3 263 aa21.09■□□□□ 0.97
Shank1-203ENSMUST00000107938 Wdr43Q6ZQL4 677 aaKnown RBP21.06■□□□□ 0.96
Shank1-203ENSMUST00000107938 Calr4Q3TQS0 420 aa21.05■□□□□ 0.96
Shank1-203ENSMUST00000107938 NischQ80TM9 1593 aa21.04■□□□□ 0.96
Shank1-203ENSMUST00000107938 Q8BT18 775 aa20.98■□□□□ 0.95
Shank1-203ENSMUST00000107938 DekQ7TNV0 380 aaKnown RBP20.97■□□□□ 0.95
Shank1-203ENSMUST00000107938 Znf316Q6PGE4 1016 aa20.96■□□□□ 0.95
Shank1-203ENSMUST00000107938 Dcaf1Q80TR8 1506 aa20.95■□□□□ 0.94
Shank1-203ENSMUST00000107938 SetQ9EQU5 289 aaKnown RBP20.93■□□□□ 0.94
Shank1-203ENSMUST00000107938 Pknox2Q8BG99 474 aa20.91■□□□□ 0.94
Shank1-203ENSMUST00000107938 4933402E13RikQ9D4D2 429 aa20.88■□□□□ 0.93
Shank1-203ENSMUST00000107938 MsnP26041 577 aaKnown RBP20.86■□□□□ 0.93
Shank1-203ENSMUST00000107938 Fam50aQ9WV03 339 aaKnown RBP20.84■□□□□ 0.93
Shank1-203ENSMUST00000107938 Hdac5Q9Z2V6 1113 aa20.83■□□□□ 0.93
Shank1-203ENSMUST00000107938 Ppp4r2Q0VGB7 417 aa20.83■□□□□ 0.92
Shank1-203ENSMUST00000107938 BccipQ9CWI3 316 aa20.82■□□□□ 0.92
Shank1-203ENSMUST00000107938 PtmaP26350 111 aa20.82■□□□□ 0.92
Shank1-203ENSMUST00000107938 CalrP14211 416 aaKnown RBP20.82■□□□□ 0.92
Shank1-203ENSMUST00000107938 Os9Q8K2C7 672 aa20.79■□□□□ 0.92
Shank1-203ENSMUST00000107938 Ppm1gQ61074 542 aa20.76■□□□□ 0.91
Shank1-203ENSMUST00000107938 CanxP35564 591 aaKnown RBP20.76■□□□□ 0.91
Shank1-203ENSMUST00000107938 Mak16Q8BGS0 296 aaKnown RBP20.74■□□□□ 0.91
Shank1-203ENSMUST00000107938 Dusp9Q7TNL7 452 aa20.69■□□□□ 0.9
Shank1-203ENSMUST00000107938 1700123L14RikQ3V2K7 440 aa20.69■□□□□ 0.9
Shank1-203ENSMUST00000107938 PtmsQ9D0J8 101 aaKnown RBP20.67■□□□□ 0.9
Shank1-203ENSMUST00000107938 Nlrp6Q91WS2 869 aa20.67■□□□□ 0.9
Shank1-203ENSMUST00000107938 Rrp12Q6P5B0 1295 aaKnown RBP20.66■□□□□ 0.9
Shank1-203ENSMUST00000107938 Hsp90ab1P11499 724 aaKnown RBP20.66■□□□□ 0.9
Shank1-203ENSMUST00000107938 Gm973E9Q295 1059 aa20.64■□□□□ 0.9
Shank1-203ENSMUST00000107938 Mier1Q5UAK0 511 aa20.63■□□□□ 0.89
Shank1-203ENSMUST00000107938 Fam71e1A1L3C1 212 aa20.61■□□□□ 0.89
Shank1-203ENSMUST00000107938 ArxO35085 564 aa20.56■□□□□ 0.88
Shank1-203ENSMUST00000107938 Ddrgk1Q80WW9 315 aa20.54■□□□□ 0.88
Retrieved 100 of 22,080 RNA–protein pairs in 35 ms