RNA–Protein interactions for RNA: ENSMUST00000107938.7

Shank1-203, Transcript of SH3 and multiple ankyrin repeat domains protein 1, mousemouse

APPRIS P2 TSL 5 BASIC

Gene Shank1, Length 9,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1-203ENSMUST00000107938 Rpgrip1Q9EPQ2 1331 aa27,12■■□□□ 1,93
Shank1-203ENSMUST00000107938 Cngb1E1AZ71 1325 aa26,85■■□□□ 1,89
Shank1-203ENSMUST00000107938 Las1lA2BE28 776 aaKnown RBP26,78■■□□□ 1,88
Shank1-203ENSMUST00000107938 Pelp1Q9DBD5 1123 aaKnown RBP26,35■■□□□ 1,81
Shank1-203ENSMUST00000107938 Myt1Q8CFC2 1127 aa25,49■■□□□ 1,67
Shank1-203ENSMUST00000107938 Amer1Q7TS75 1132 aa25,19■■□□□ 1,62
Shank1-203ENSMUST00000107938 Wdr66E9Q743 1299 aa25,15■■□□□ 1,62
Shank1-203ENSMUST00000107938 Rhox8Q6VSS7 320 aa25,02■■□□□ 1,6
Shank1-203ENSMUST00000107938 4930567H17RikQ3V0K5 233 aa24,9■■□□□ 1,58
Shank1-203ENSMUST00000107938 CenpbP27790 599 aa24,87■■□□□ 1,57
Shank1-203ENSMUST00000107938 Rtl1Q7M732 1744 aa24,26■■□□□ 1,47
Shank1-203ENSMUST00000107938 Stra8P70278 393 aa24,13■■□□□ 1,45
Shank1-203ENSMUST00000107938 Rtl5Q5DTT4 599 aa23,88■■□□□ 1,41
Shank1-203ENSMUST00000107938 DiexfQ8BTT6 772 aaKnown RBP23,79■■□□□ 1,4
Shank1-203ENSMUST00000107938 Ccdc180J3QNE4 1664 aa23,48■■□□□ 1,35
Shank1-203ENSMUST00000107938 Ythdc1E9Q5K9 736 aaKnown RBP23,47■■□□□ 1,35
Shank1-203ENSMUST00000107938 Tnnt3Q9QZ47 272 aa23,44■■□□□ 1,34
Shank1-203ENSMUST00000107938 Acin1Q9JIX8 1338 aaKnown RBP23,43■■□□□ 1,34
Shank1-203ENSMUST00000107938 Zeb1Q64318 1117 aa23,42■■□□□ 1,34
Shank1-203ENSMUST00000107938 4933416C03RikQ3V063 378 aa23,38■■□□□ 1,33
Shank1-203ENSMUST00000107938 NefmP08553 848 aa23,36■■□□□ 1,33
Shank1-203ENSMUST00000107938 Ttbk1Q6PCN3 1308 aa23,33■■□□□ 1,33
Shank1-203ENSMUST00000107938 Ehmt2Q9Z148 1263 aaKnown RBP23,04■■□□□ 1,28
Shank1-203ENSMUST00000107938 Cdk11bP24788 784 aaKnown RBP22,94■■□□□ 1,26
Shank1-203ENSMUST00000107938 NeflP08551 543 aa22,9■■□□□ 1,26
Shank1-203ENSMUST00000107938 Ccdc9Q8VC31 543 aaKnown RBP22,84■■□□□ 1,25
Shank1-203ENSMUST00000107938 Ube2uB1AUC4 352 aa22,73■■□□□ 1,23
Shank1-203ENSMUST00000107938 Pcgf6Q99NA9 353 aa22,53■■□□□ 1,2
Shank1-203ENSMUST00000107938 Anp32bQ9EST5 272 aaKnown RBP22,49■■□□□ 1,19
Shank1-203ENSMUST00000107938 HrcG5E8J6 738 aa22,46■■□□□ 1,19
Shank1-203ENSMUST00000107938 Anp32aO35381 247 aa22,42■■□□□ 1,18
Shank1-203ENSMUST00000107938 Nop58Q6DFW4 536 aaKnown RBP22,4■■□□□ 1,18
Shank1-203ENSMUST00000107938 NrdcQ8BHG1 1161 aa22,36■■□□□ 1,17
Shank1-203ENSMUST00000107938 Neurod1Q60867 357 aa22,35■■□□□ 1,17
Shank1-203ENSMUST00000107938 Myt1lP97500 1187 aa22,27■■□□□ 1,16
Shank1-203ENSMUST00000107938 DaxxO35613 739 aa22,2■■□□□ 1,14
Shank1-203ENSMUST00000107938 CatipB9EKE5 520 aa22,12■■□□□ 1,13
Shank1-203ENSMUST00000107938 Slc24a1Q91WD8 1130 aa22,1■■□□□ 1,13
Shank1-203ENSMUST00000107938 Trim41Q5NCC3 630 aa22,05■■□□□ 1,12
Shank1-203ENSMUST00000107938 Aplp2Q06335 707 aa21,99■■□□□ 1,11
Shank1-203ENSMUST00000107938 Npm2Q80W85 207 aa21,85■■□□□ 1,09
Shank1-203ENSMUST00000107938 Esf1Q3V1V3 845 aaKnown RBP21,76■■□□□ 1,07
Shank1-203ENSMUST00000107938 Upf2A2AT37 1269 aaKnown RBP21,75■■□□□ 1,07
Shank1-203ENSMUST00000107938 Hsp90aa1P07901 733 aaKnown RBP21,69■■□□□ 1,06
Shank1-203ENSMUST00000107938 Polr3glQ8R0C0 218 aa21,68■■□□□ 1,06
Shank1-203ENSMUST00000107938 Anks4bQ8K3X6 423 aa21,67■■□□□ 1,06
Shank1-203ENSMUST00000107938 ClspnQ80YR7 1315 aa21,67■■□□□ 1,06
Shank1-203ENSMUST00000107938 Adam1bQ8R534 806 aa21,6■■□□□ 1,05
Shank1-203ENSMUST00000107938 Supt5hO55201 1082 aaKnown RBP21,59■■□□□ 1,05
Shank1-203ENSMUST00000107938 Eif5bQ05D44 1216 aaKnown RBP21,58■■□□□ 1,05
Shank1-203ENSMUST00000107938 NclP09405 707 aaKnown RBP21,58■■□□□ 1,05
Shank1-203ENSMUST00000107938 Tnnt2P50752 301 aa21,56■■□□□ 1,04
Shank1-203ENSMUST00000107938 Gab3Q8BSM5 595 aa21,56■■□□□ 1,04
Shank1-203ENSMUST00000107938 UbtfP25976 765 aaKnown RBP21,55■■□□□ 1,04
Shank1-203ENSMUST00000107938 TonslQ6NZL6 1363 aa21,53■■□□□ 1,04
Shank1-203ENSMUST00000107938 Ccdc136Q3TVA9 1136 aa21,53■■□□□ 1,04
Shank1-203ENSMUST00000107938 Trim44Q9QXA7 346 aa21,49■■□□□ 1,03
Shank1-203ENSMUST00000107938 Bcl11aQ9QYE3 773 aa21,47■■□□□ 1,03
Shank1-203ENSMUST00000107938 Irx3P81067 507 aa21,35■■□□□ 1,01
Shank1-203ENSMUST00000107938 Ccdc27Q3V036 639 aa21,35■■□□□ 1,01
Shank1-203ENSMUST00000107938 Lmod3E9QA62 571 aa21,32■■□□□ 1
Shank1-203ENSMUST00000107938 Znf326O88291 580 aa21,24■□□□□ 0,99
Shank1-203ENSMUST00000107938 Htatsf1Q8BGC0 757 aa21,21■□□□□ 0,99
Shank1-203ENSMUST00000107938 Rangap1P46061 589 aaKnown RBP21,17■□□□□ 0,98
Shank1-203ENSMUST00000107938 Map7d2A2AG50 781 aa21,15■□□□□ 0,98
Shank1-203ENSMUST00000107938 Csrnp3P59055 597 aa21,14■□□□□ 0,97
Shank1-203ENSMUST00000107938 Calcoco2A2A6M5 331 aa21,13■□□□□ 0,97
Shank1-203ENSMUST00000107938 AU015836B2RUM3 263 aa21,09■□□□□ 0,97
Shank1-203ENSMUST00000107938 Wdr43Q6ZQL4 677 aaKnown RBP21,06■□□□□ 0,96
Shank1-203ENSMUST00000107938 Calr4Q3TQS0 420 aa21,05■□□□□ 0,96
Shank1-203ENSMUST00000107938 NischQ80TM9 1593 aa21,04■□□□□ 0,96
Shank1-203ENSMUST00000107938 Q8BT18 775 aa20,98■□□□□ 0,95
Shank1-203ENSMUST00000107938 DekQ7TNV0 380 aaKnown RBP20,97■□□□□ 0,95
Shank1-203ENSMUST00000107938 Znf316Q6PGE4 1016 aa20,96■□□□□ 0,95
Shank1-203ENSMUST00000107938 Dcaf1Q80TR8 1506 aa20,95■□□□□ 0,94
Shank1-203ENSMUST00000107938 SetQ9EQU5 289 aaKnown RBP20,93■□□□□ 0,94
Shank1-203ENSMUST00000107938 Pknox2Q8BG99 474 aa20,91■□□□□ 0,94
Shank1-203ENSMUST00000107938 4933402E13RikQ9D4D2 429 aa20,88■□□□□ 0,93
Shank1-203ENSMUST00000107938 MsnP26041 577 aaKnown RBP20,86■□□□□ 0,93
Shank1-203ENSMUST00000107938 Fam50aQ9WV03 339 aaKnown RBP20,84■□□□□ 0,93
Shank1-203ENSMUST00000107938 Hdac5Q9Z2V6 1113 aa20,83■□□□□ 0,93
Shank1-203ENSMUST00000107938 Ppp4r2Q0VGB7 417 aa20,83■□□□□ 0,92
Shank1-203ENSMUST00000107938 BccipQ9CWI3 316 aa20,82■□□□□ 0,92
Shank1-203ENSMUST00000107938 PtmaP26350 111 aa20,82■□□□□ 0,92
Shank1-203ENSMUST00000107938 CalrP14211 416 aaKnown RBP20,82■□□□□ 0,92
Shank1-203ENSMUST00000107938 Os9Q8K2C7 672 aa20,79■□□□□ 0,92
Shank1-203ENSMUST00000107938 Ppm1gQ61074 542 aa20,76■□□□□ 0,91
Shank1-203ENSMUST00000107938 CanxP35564 591 aaKnown RBP20,76■□□□□ 0,91
Shank1-203ENSMUST00000107938 Mak16Q8BGS0 296 aaKnown RBP20,74■□□□□ 0,91
Shank1-203ENSMUST00000107938 Dusp9Q7TNL7 452 aa20,69■□□□□ 0,9
Shank1-203ENSMUST00000107938 1700123L14RikQ3V2K7 440 aa20,69■□□□□ 0,9
Shank1-203ENSMUST00000107938 PtmsQ9D0J8 101 aaKnown RBP20,67■□□□□ 0,9
Shank1-203ENSMUST00000107938 Nlrp6Q91WS2 869 aa20,67■□□□□ 0,9
Shank1-203ENSMUST00000107938 Rrp12Q6P5B0 1295 aaKnown RBP20,66■□□□□ 0,9
Shank1-203ENSMUST00000107938 Hsp90ab1P11499 724 aaKnown RBP20,66■□□□□ 0,9
Shank1-203ENSMUST00000107938 Gm973E9Q295 1059 aa20,64■□□□□ 0,9
Shank1-203ENSMUST00000107938 Mier1Q5UAK0 511 aa20,63■□□□□ 0,89
Shank1-203ENSMUST00000107938 Fam71e1A1L3C1 212 aa20,61■□□□□ 0,89
Shank1-203ENSMUST00000107938 ArxO35085 564 aa20,56■□□□□ 0,88
Shank1-203ENSMUST00000107938 Ddrgk1Q80WW9 315 aa20,54■□□□□ 0,88
Retrieved 100 of 22,080 RNA–protein pairs in 7,1 ms