RNA–Protein interactions for RNA: ENSMUST00000095476.5

Lig4-201, Transcript of DNA ligase 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lig4, Length 5,028 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig4-201ENSMUST00000095476 Nlrp6Q91WS2 869 aa13.57□□□□□ -0.24
Lig4-201ENSMUST00000095476 Brd4Q9ESU6 1400 aaKnown RBP13.57□□□□□ -0.24
Lig4-201ENSMUST00000095476 Hsp90ab1P11499 724 aaKnown RBP13.56□□□□□ -0.24
Lig4-201ENSMUST00000095476 Pknox2Q8BG99 474 aa13.56□□□□□ -0.24
Lig4-201ENSMUST00000095476 Hdac5Q9Z2V6 1113 aa13.55□□□□□ -0.24
Lig4-201ENSMUST00000095476 Ppm1gQ61074 542 aa13.55□□□□□ -0.24
Lig4-201ENSMUST00000095476 Ofd1Q80Z25 1017 aa13.55□□□□□ -0.24
Lig4-201ENSMUST00000095476 Rad21Q61550 635 aaKnown RBP13.55□□□□□ -0.24
Lig4-201ENSMUST00000095476 Polr3glQ8R0C0 218 aa13.54□□□□□ -0.24
Lig4-201ENSMUST00000095476 DekQ7TNV0 380 aaKnown RBP13.54□□□□□ -0.24
Lig4-201ENSMUST00000095476 Ipo9Q91YE6 1041 aa13.52□□□□□ -0.24
Lig4-201ENSMUST00000095476 CatipB9EKE5 520 aa13.52□□□□□ -0.24
Lig4-201ENSMUST00000095476 Trim30dE9PWL0 497 aa13.52□□□□□ -0.25
Lig4-201ENSMUST00000095476 Zbtb4Q5F293 982 aa13.51□□□□□ -0.25
Lig4-201ENSMUST00000095476 Tcerg1Q8CGF7 1100 aaKnown RBP13.51□□□□□ -0.25
Lig4-201ENSMUST00000095476 Rb1cc1Q9ESK9 1588 aa13.49□□□□□ -0.25
Lig4-201ENSMUST00000095476 Nolc1E9Q5C9 702 aaKnown RBP13.47□□□□□ -0.25
Lig4-201ENSMUST00000095476 Zbtb7cQ8VCZ7 619 aa13.46□□□□□ -0.25
Lig4-201ENSMUST00000095476 Vsig10D3YX43 558 aa13.44□□□□□ -0.26
Lig4-201ENSMUST00000095476 Slc4a3P16283 1227 aa13.44□□□□□ -0.26
Lig4-201ENSMUST00000095476 Tnnt2P50752 301 aa13.43□□□□□ -0.26
Lig4-201ENSMUST00000095476 Dnttip2Q8R2M2 758 aaKnown RBP13.41□□□□□ -0.26
Lig4-201ENSMUST00000095476 Plcb2A3KGF7 1181 aa13.4□□□□□ -0.26
Lig4-201ENSMUST00000095476 Gm13697A2AK42 830 aa13.4□□□□□ -0.26
Lig4-201ENSMUST00000095476 PtmaP26350 111 aa13.39□□□□□ -0.27
Lig4-201ENSMUST00000095476 Ubl4bQ9CQ84 188 aa13.39□□□□□ -0.27
Lig4-201ENSMUST00000095476 BlmO88700 1416 aa13.39□□□□□ -0.27
Lig4-201ENSMUST00000095476 Taok2Q6ZQ29 1240 aa13.38□□□□□ -0.27
Lig4-201ENSMUST00000095476 Ifnlr1Q8CGK5 535 aa13.38□□□□□ -0.27
Lig4-201ENSMUST00000095476 Spryd3E9Q9B3 442 aa13.35□□□□□ -0.27
Lig4-201ENSMUST00000095476 Dnai1Q8C0M8 701 aa13.35□□□□□ -0.27
Lig4-201ENSMUST00000095476 Sycp2Q9CUU3 1500 aa13.33□□□□□ -0.27
Lig4-201ENSMUST00000095476 Chic2Q9D9G3 165 aa13.32□□□□□ -0.28
Lig4-201ENSMUST00000095476 Prdm10Q3UTQ7 1184 aa13.31□□□□□ -0.28
Lig4-201ENSMUST00000095476 B4galnt3Q6L8S8 986 aa13.31□□□□□ -0.28
Lig4-201ENSMUST00000095476 Dbr1Q923B1 550 aa13.31□□□□□ -0.28
Lig4-201ENSMUST00000095476 Rrp12Q6P5B0 1295 aaKnown RBP13.31□□□□□ -0.28
Lig4-201ENSMUST00000095476 Mbd3Q9Z2D8 285 aaKnown RBP13.31□□□□□ -0.28
Lig4-201ENSMUST00000095476 Rsf1E9PWW9 1441 aaKnown RBP13.3□□□□□ -0.28
Lig4-201ENSMUST00000095476 Plcd4Q8K3R3 807 aa13.3□□□□□ -0.28
Lig4-201ENSMUST00000095476 Setd5Q5XJV7 1441 aa13.29□□□□□ -0.28
Lig4-201ENSMUST00000095476 Npm1Q61937 292 aaKnown RBP13.27□□□□□ -0.28
Lig4-201ENSMUST00000095476 Golga3P55937 1487 aa13.27□□□□□ -0.29
Lig4-201ENSMUST00000095476 Arid4bA2CG63 1314 aaKnown RBP13.27□□□□□ -0.29
Lig4-201ENSMUST00000095476 Wwc2Q6NXJ0 1187 aa13.26□□□□□ -0.29
Lig4-201ENSMUST00000095476 Cwc22Q8C5N3 908 aaKnown RBP13.25□□□□□ -0.29
Lig4-201ENSMUST00000095476 4933402E13RikQ9D4D2 429 aa13.24□□□□□ -0.29
Lig4-201ENSMUST00000095476 Rangap1P46061 589 aaKnown RBP13.22□□□□□ -0.29
Lig4-201ENSMUST00000095476 Chmp5Q9D7S9 219 aa13.22□□□□□ -0.29
Lig4-201ENSMUST00000095476 Ercc6F8VPZ5 1481 aa13.22□□□□□ -0.29
Lig4-201ENSMUST00000095476 Adam1bQ8R534 806 aa13.22□□□□□ -0.29
Lig4-201ENSMUST00000095476 Apbb1Q9QXJ1 710 aa13.22□□□□□ -0.29
Lig4-201ENSMUST00000095476 Pds5bQ4VA53 1446 aaKnown RBP13.22□□□□□ -0.29
Lig4-201ENSMUST00000095476 Erich6D3Z6S9 713 aa13.22□□□□□ -0.29
Lig4-201ENSMUST00000095476 EspnQ9ET47 871 aa13.22□□□□□ -0.29
Lig4-201ENSMUST00000095476 ChgaP26339 463 aaKnown RBP13.21□□□□□ -0.29
Lig4-201ENSMUST00000095476 Pdcl3Q8BVF2 240 aa13.21□□□□□ -0.3
Lig4-201ENSMUST00000095476 Erich6bQ9D4S6 220 aa13.21□□□□□ -0.3
Lig4-201ENSMUST00000095476 Eea1Q8BL66 1411 aa13.2□□□□□ -0.3
Lig4-201ENSMUST00000095476 Ddrgk1Q80WW9 315 aa13.19□□□□□ -0.3
Lig4-201ENSMUST00000095476 Hspa5P20029 655 aaKnown RBP13.18□□□□□ -0.3
Lig4-201ENSMUST00000095476 MsnP26041 577 aaKnown RBP13.18□□□□□ -0.3
Lig4-201ENSMUST00000095476 Rgl3Q3UYI5 709 aa13.18□□□□□ -0.3
Lig4-201ENSMUST00000095476 Rtn4Q99P72 1162 aaKnown RBP13.18□□□□□ -0.3
Lig4-201ENSMUST00000095476 Baz1aO88379 1555 aa13.17□□□□□ -0.3
Lig4-201ENSMUST00000095476 Exoc6Q8R313 802 aa13.17□□□□□ -0.3
Lig4-201ENSMUST00000095476 Map7O88735 730 aa13.16□□□□□ -0.3
Lig4-201ENSMUST00000095476 Rwdd1Q9CQK7 243 aa13.16□□□□□ -0.3
Lig4-201ENSMUST00000095476 Ipo4Q8VI75 1082 aa13.16□□□□□ -0.3
Lig4-201ENSMUST00000095476 Trim26Q99PN3 545 aa13.15□□□□□ -0.3
Lig4-201ENSMUST00000095476 Mia2Q91ZV0 1396 aa13.15□□□□□ -0.3
Lig4-201ENSMUST00000095476 Ipo8Q7TMY7 1010 aa13.15□□□□□ -0.31
Lig4-201ENSMUST00000095476 Card11Q8CIS0 1159 aa13.14□□□□□ -0.31
Lig4-201ENSMUST00000095476 Gm13695A2AK44 830 aa13.13□□□□□ -0.31
Lig4-201ENSMUST00000095476 Mre11Q61216 706 aa13.13□□□□□ -0.31
Lig4-201ENSMUST00000095476 Sin3aQ60520 1274 aaKnown RBP13.11□□□□□ -0.31
Lig4-201ENSMUST00000095476 VgfQ0VGU4 617 aa13.11□□□□□ -0.31
Lig4-201ENSMUST00000095476 Znf316Q6PGE4 1016 aa13.1□□□□□ -0.31
Lig4-201ENSMUST00000095476 Casc1Q6TDU8 730 aa13.1□□□□□ -0.31
Lig4-201ENSMUST00000095476 Neurod2Q62414 383 aa13.1□□□□□ -0.31
Lig4-201ENSMUST00000095476 Znf710Q3U288 666 aa13.09□□□□□ -0.31
Lig4-201ENSMUST00000095476 Fgd1P52734 960 aa13.08□□□□□ -0.32
Lig4-201ENSMUST00000095476 Mapk8ip3Q9ESN9 1337 aa13.08□□□□□ -0.32
Lig4-201ENSMUST00000095476 Dnajc5bQ9CQ94 199 aa13.08□□□□□ -0.32
Lig4-201ENSMUST00000095476 Armcx1Q9CX83 456 aa13.07□□□□□ -0.32
Lig4-201ENSMUST00000095476 Clstn2Q9ER65 966 aa13.07□□□□□ -0.32
Lig4-201ENSMUST00000095476 Smg6P61406 1418 aaKnown RBP13.07□□□□□ -0.32
Lig4-201ENSMUST00000095476 Rrp9Q91WM3 475 aaKnown RBP13.07□□□□□ -0.32
Lig4-201ENSMUST00000095476 SlkO54988 1233 aa13.05□□□□□ -0.32
Lig4-201ENSMUST00000095476 KnstrnQ9D9Z1 312 aaKnown RBP13.05□□□□□ -0.32
Lig4-201ENSMUST00000095476 CntlnA2AM05 1397 aa13.05□□□□□ -0.32
Lig4-201ENSMUST00000095476 Grwd1Q810D6 446 aaKnown RBP13.04□□□□□ -0.32
Lig4-201ENSMUST00000095476 Mak16Q8BGS0 296 aaKnown RBP13.04□□□□□ -0.32
Lig4-201ENSMUST00000095476 Becn1O88597 448 aa13.04□□□□□ -0.32
Lig4-201ENSMUST00000095476 Sart3Q9JLI8 962 aaKnown RBP13.04□□□□□ -0.32
Lig4-201ENSMUST00000095476 Fhad1A6PWD2 1420 aa13.04□□□□□ -0.32
Lig4-201ENSMUST00000095476 PtmsQ9D0J8 101 aaKnown RBP13.04□□□□□ -0.32
Lig4-201ENSMUST00000095476 Fbxo2Q80UW2 297 aa13.03□□□□□ -0.32
Lig4-201ENSMUST00000095476 Zscan21Q07231 555 aa13.02□□□□□ -0.32
Lig4-201ENSMUST00000095476 Ccdc88bQ4QRL3 1481 aa13.02□□□□□ -0.32
Retrieved 100 of 22,080 RNA–protein pairs in 15 ms