RNA–Protein interactions for RNA: ENSMUST00000089520.2

Shroom4-201, Transcript of Protein Shroom4, mousemouse

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Gene Shroom4, Length 8,201 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom4-201ENSMUST00000089520 Myt1Q8CFC2 1127 aa8.62□□□□□ -1.03
Shroom4-201ENSMUST00000089520 Exosc9Q9JHI7 438 aaKnown RBP8.62□□□□□ -1.03
Shroom4-201ENSMUST00000089520 Dcaf1Q80TR8 1506 aa8.6□□□□□ -1.03
Shroom4-201ENSMUST00000089520 ClspnQ80YR7 1315 aa8.6□□□□□ -1.03
Shroom4-201ENSMUST00000089520 Setd5Q5XJV7 1441 aa8.6□□□□□ -1.03
Shroom4-201ENSMUST00000089520 Mtus2Q3UHD3 1353 aa8.57□□□□□ -1.04
Shroom4-201ENSMUST00000089520 Chmp4bQ9D8B3 224 aaKnown RBP8.57□□□□□ -1.04
Shroom4-201ENSMUST00000089520 Chic2Q9D9G3 165 aa8.57□□□□□ -1.04
Shroom4-201ENSMUST00000089520 Mroh3A0A1D5RM54 893 aa8.56□□□□□ -1.04
Shroom4-201ENSMUST00000089520 Gm20521D3Z5F7 333 aa8.54□□□□□ -1.04
Shroom4-201ENSMUST00000089520 MlecQ6ZQI3 291 aaKnown RBP8.54□□□□□ -1.04
Shroom4-201ENSMUST00000089520 Eea1Q8BL66 1411 aa8.53□□□□□ -1.04
Shroom4-201ENSMUST00000089520 Aplp2Q06335 707 aa8.52□□□□□ -1.04
Shroom4-201ENSMUST00000089520 AknaQ80VW7 1404 aa8.52□□□□□ -1.05
Shroom4-201ENSMUST00000089520 Mapk8ip3Q9ESN9 1337 aa8.52□□□□□ -1.05
Shroom4-201ENSMUST00000089520 Rrp7aQ9D1C9 280 aaKnown RBP8.51□□□□□ -1.05
Shroom4-201ENSMUST00000089520 Golga3P55937 1487 aa8.51□□□□□ -1.05
Shroom4-201ENSMUST00000089520 Stag3O70576 1240 aa8.51□□□□□ -1.05
Shroom4-201ENSMUST00000089520 Gm6268A2A3U9 297 aa8.5□□□□□ -1.05
Shroom4-201ENSMUST00000089520 Dnai2A2AC93 623 aa8.5□□□□□ -1.05
Shroom4-201ENSMUST00000089520 NgefQ8CHT1 710 aa8.49□□□□□ -1.05
Shroom4-201ENSMUST00000089520 Grwd1Q810D6 446 aaKnown RBP8.48□□□□□ -1.05
Shroom4-201ENSMUST00000089520 Lemd3Q9WU40 921 aa8.48□□□□□ -1.05
Shroom4-201ENSMUST00000089520 Kdm2aP59997 1161 aa8.48□□□□□ -1.05
Shroom4-201ENSMUST00000089520 Anp32aO35381 247 aa8.48□□□□□ -1.05
Shroom4-201ENSMUST00000089520 Cwc22Q8C5N3 908 aaKnown RBP8.48□□□□□ -1.05
Shroom4-201ENSMUST00000089520 Arid4bA2CG63 1314 aaKnown RBP8.48□□□□□ -1.05
Shroom4-201ENSMUST00000089520 NudcO35685 332 aaKnown RBP8.47□□□□□ -1.05
Shroom4-201ENSMUST00000089520 Dhx57Q6P5D3 1388 aaKnown RBP8.47□□□□□ -1.05
Shroom4-201ENSMUST00000089520 Kdm5dQ62240 1548 aa8.47□□□□□ -1.05
Shroom4-201ENSMUST00000089520 Rangap1P46061 589 aaKnown RBP8.47□□□□□ -1.05
Shroom4-201ENSMUST00000089520 Rgl3Q3UYI5 709 aa8.46□□□□□ -1.06
Shroom4-201ENSMUST00000089520 Irx6Q9ER75 438 aa8.46□□□□□ -1.06
Shroom4-201ENSMUST00000089520 Psme1P97371 249 aa8.45□□□□□ -1.06
Shroom4-201ENSMUST00000089520 Mia2Q91ZV0 1396 aa8.45□□□□□ -1.06
Shroom4-201ENSMUST00000089520 Stk24Q99KH8 431 aa8.45□□□□□ -1.06
Shroom4-201ENSMUST00000089520 PnnO35691 725 aaKnown RBP8.45□□□□□ -1.06
Shroom4-201ENSMUST00000089520 Eid3Q3V124 375 aa8.44□□□□□ -1.06
Shroom4-201ENSMUST00000089520 Ppargc1bQ8VHJ7 1014 aa8.44□□□□□ -1.06
Shroom4-201ENSMUST00000089520 DaxxO35613 739 aa8.44□□□□□ -1.06
Shroom4-201ENSMUST00000089520 Pde3bQ61409 1100 aa8.43□□□□□ -1.06
Shroom4-201ENSMUST00000089520 Nol10Q5RJG1 687 aaKnown RBP8.43□□□□□ -1.06
Shroom4-201ENSMUST00000089520 Pabpn1Q8CCS6 302 aaKnown RBP8.43□□□□□ -1.06
Shroom4-201ENSMUST00000089520 Kif27Q7M6Z4 1394 aa8.41□□□□□ -1.06
Shroom4-201ENSMUST00000089520 Rtf1A2AQ19 715 aaKnown RBP8.41□□□□□ -1.06
Shroom4-201ENSMUST00000089520 CatipB9EKE5 520 aa8.41□□□□□ -1.06
Shroom4-201ENSMUST00000089520 Rad21Q61550 635 aaKnown RBP8.41□□□□□ -1.06
Shroom4-201ENSMUST00000089520 Phldb1Q6PDH0 1371 aaKnown RBP8.4□□□□□ -1.06
Shroom4-201ENSMUST00000089520 Card11Q8CIS0 1159 aa8.4□□□□□ -1.06
Shroom4-201ENSMUST00000089520 Rtn4Q99P72 1162 aaKnown RBP8.4□□□□□ -1.06
Shroom4-201ENSMUST00000089520 Pes1Q9EQ61 584 aaKnown RBP8.4□□□□□ -1.06
Shroom4-201ENSMUST00000089520 Txndc2Q6P902 515 aa8.4□□□□□ -1.06
Shroom4-201ENSMUST00000089520 Ythdc1E9Q5K9 736 aaKnown RBP8.38□□□□□ -1.07
Shroom4-201ENSMUST00000089520 Arid3cA6PWV5 409 aa8.38□□□□□ -1.07
Shroom4-201ENSMUST00000089520 Fhad1A6PWD2 1420 aa8.38□□□□□ -1.07
Shroom4-201ENSMUST00000089520 Pcgf6Q99NA9 353 aa8.38□□□□□ -1.07
Shroom4-201ENSMUST00000089520 Q8BT18 775 aa8.37□□□□□ -1.07
Shroom4-201ENSMUST00000089520 Ppm1fQ8CGA0 452 aa8.37□□□□□ -1.07
Shroom4-201ENSMUST00000089520 ArxO35085 564 aa8.36□□□□□ -1.07
Shroom4-201ENSMUST00000089520 Fmn1Q05860 1466 aa8.36□□□□□ -1.07
Shroom4-201ENSMUST00000089520 Trim26Q99PN3 545 aa8.36□□□□□ -1.07
Shroom4-201ENSMUST00000089520 Map7O88735 730 aa8.36□□□□□ -1.07
Shroom4-201ENSMUST00000089520 WrnO09053 1401 aa8.36□□□□□ -1.07
Shroom4-201ENSMUST00000089520 Rpap1Q80TE0 1409 aa8.35□□□□□ -1.07
Shroom4-201ENSMUST00000089520 Hmgb2P30681 210 aaKnown RBP8.35□□□□□ -1.07
Shroom4-201ENSMUST00000089520 Ap3b2Q9JME5 1082 aa8.35□□□□□ -1.07
Shroom4-201ENSMUST00000089520 Spag9Q58A65 1321 aaKnown RBP8.34□□□□□ -1.07
Shroom4-201ENSMUST00000089520 HnrnpuQ8VEK3 800 aaKnown RBP8.34□□□□□ -1.07
Shroom4-201ENSMUST00000089520 Mrs2Q5NCE8 434 aa8.34□□□□□ -1.07
Shroom4-201ENSMUST00000089520 Supt5hO55201 1082 aaKnown RBP8.34□□□□□ -1.08
Shroom4-201ENSMUST00000089520 Stard8Q8K031 1019 aa8.33□□□□□ -1.08
Shroom4-201ENSMUST00000089520 Clstn1Q9EPL2 979 aa8.33□□□□□ -1.08
Shroom4-201ENSMUST00000089520 Sart3Q9JLI8 962 aaKnown RBP8.33□□□□□ -1.08
Shroom4-201ENSMUST00000089520 MccE9PWI3 1003 aa8.33□□□□□ -1.08
Shroom4-201ENSMUST00000089520 Rab11fip3Q8CHD8 1047 aa8.32□□□□□ -1.08
Shroom4-201ENSMUST00000089520 Cux2P70298 1426 aa8.32□□□□□ -1.08
Shroom4-201ENSMUST00000089520 Sh3bp5Q9Z131 463 aa8.31□□□□□ -1.08
Shroom4-201ENSMUST00000089520 DekQ7TNV0 380 aaKnown RBP8.31□□□□□ -1.08
Shroom4-201ENSMUST00000089520 Map4P27546 1125 aaKnown RBP8.31□□□□□ -1.08
Shroom4-201ENSMUST00000089520 Baz1bQ9Z277 1479 aa8.31□□□□□ -1.08
Shroom4-201ENSMUST00000089520 Sycp2Q9CUU3 1500 aa8.3□□□□□ -1.08
Shroom4-201ENSMUST00000089520 Gtf2e1Q9D0D5 440 aa8.3□□□□□ -1.08
Shroom4-201ENSMUST00000089520 Fyco1Q8VDC1 1437 aa8.3□□□□□ -1.08
Shroom4-201ENSMUST00000089520 Fbln2P37889 1221 aa8.3□□□□□ -1.08
Shroom4-201ENSMUST00000089520 Smarca2Q6DIC0 1577 aa8.29□□□□□ -1.08
Shroom4-201ENSMUST00000089520 Ccnb3Q810T2 1396 aa8.29□□□□□ -1.08
Shroom4-201ENSMUST00000089520 Ncoa2Q61026 1462 aa8.29□□□□□ -1.08
Shroom4-201ENSMUST00000089520 Polr1aO35134 1717 aaKnown RBP8.29□□□□□ -1.08
Shroom4-201ENSMUST00000089520 Atad2bE9Q166 1460 aaKnown RBP8.29□□□□□ -1.08
Shroom4-201ENSMUST00000089520 Ddx11Q6AXC6 880 aa8.28□□□□□ -1.08
Shroom4-201ENSMUST00000089520 Ciz1Q8VEH2 845 aa8.27□□□□□ -1.09
Shroom4-201ENSMUST00000089520 Crybg2B7ZCC2 1516 aa8.27□□□□□ -1.09
Shroom4-201ENSMUST00000089520 1700019A02RikA0A087WPV9 146 aa8.27□□□□□ -1.09
Shroom4-201ENSMUST00000089520 Mapk8ip2Q9ERE9 830 aa8.27□□□□□ -1.09
Shroom4-201ENSMUST00000089520 Smarca4Q3TKT4 1613 aaKnown RBP8.27□□□□□ -1.09
Shroom4-201ENSMUST00000089520 Csrnp3P59055 597 aa8.27□□□□□ -1.09
Shroom4-201ENSMUST00000089520 KnstrnQ9D9Z1 312 aaKnown RBP8.27□□□□□ -1.09
Shroom4-201ENSMUST00000089520 Bcl11bQ99PV8 884 aa8.26□□□□□ -1.09
Shroom4-201ENSMUST00000089520 Plekhh2Q8C115 1491 aa8.26□□□□□ -1.09
Shroom4-201ENSMUST00000089520 Hsp90ab1P11499 724 aaKnown RBP8.26□□□□□ -1.09
Retrieved 100 of 22,080 RNA–protein pairs in 12.4 ms