RNA–Protein interactions for RNA: ENSMUST00000089520.2

Shroom4-201, Transcript of Protein Shroom4, mousemouse

TSL 1 (best) BASIC

Gene Shroom4, Length 8,201 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom4-201ENSMUST00000089520 Myt1Q8CFC2 1127 aa8.62□□□□□ -1.03
Shroom4-201ENSMUST00000089520 Exosc9Q9JHI7 438 aaKnown RBP8.62□□□□□ -1.03
Shroom4-201ENSMUST00000089520 Dcaf1Q80TR8 1506 aa8.6□□□□□ -1.03
Shroom4-201ENSMUST00000089520 ClspnQ80YR7 1315 aa8.6□□□□□ -1.03
Shroom4-201ENSMUST00000089520 Setd5Q5XJV7 1441 aa8.6□□□□□ -1.03
Shroom4-201ENSMUST00000089520 Mtus2Q3UHD3 1353 aa8.57□□□□□ -1.04
Shroom4-201ENSMUST00000089520 Chmp4bQ9D8B3 224 aaKnown RBP8.57□□□□□ -1.04
Shroom4-201ENSMUST00000089520 Chic2Q9D9G3 165 aa8.57□□□□□ -1.04
Shroom4-201ENSMUST00000089520 Mroh3A0A1D5RM54 893 aa8.56□□□□□ -1.04
Shroom4-201ENSMUST00000089520 Gm20521D3Z5F7 333 aa8.54□□□□□ -1.04
Shroom4-201ENSMUST00000089520 MlecQ6ZQI3 291 aaKnown RBP8.54□□□□□ -1.04
Shroom4-201ENSMUST00000089520 Eea1Q8BL66 1411 aa8.53□□□□□ -1.04
Shroom4-201ENSMUST00000089520 Aplp2Q06335 707 aa8.52□□□□□ -1.04
Shroom4-201ENSMUST00000089520 AknaQ80VW7 1404 aa8.52□□□□□ -1.05
Shroom4-201ENSMUST00000089520 Mapk8ip3Q9ESN9 1337 aa8.52□□□□□ -1.05
Shroom4-201ENSMUST00000089520 Rrp7aQ9D1C9 280 aaKnown RBP8.51□□□□□ -1.05
Shroom4-201ENSMUST00000089520 Golga3P55937 1487 aa8.51□□□□□ -1.05
Shroom4-201ENSMUST00000089520 Stag3O70576 1240 aa8.51□□□□□ -1.05
Shroom4-201ENSMUST00000089520 Gm6268A2A3U9 297 aa8.5□□□□□ -1.05
Shroom4-201ENSMUST00000089520 Dnai2A2AC93 623 aa8.5□□□□□ -1.05
Shroom4-201ENSMUST00000089520 NgefQ8CHT1 710 aa8.49□□□□□ -1.05
Shroom4-201ENSMUST00000089520 Grwd1Q810D6 446 aaKnown RBP8.48□□□□□ -1.05
Shroom4-201ENSMUST00000089520 Lemd3Q9WU40 921 aa8.48□□□□□ -1.05
Shroom4-201ENSMUST00000089520 Kdm2aP59997 1161 aa8.48□□□□□ -1.05
Shroom4-201ENSMUST00000089520 Anp32aO35381 247 aa8.48□□□□□ -1.05
Shroom4-201ENSMUST00000089520 Cwc22Q8C5N3 908 aaKnown RBP8.48□□□□□ -1.05
Shroom4-201ENSMUST00000089520 Arid4bA2CG63 1314 aaKnown RBP8.48□□□□□ -1.05
Shroom4-201ENSMUST00000089520 NudcO35685 332 aaKnown RBP8.47□□□□□ -1.05
Shroom4-201ENSMUST00000089520 Dhx57Q6P5D3 1388 aaKnown RBP8.47□□□□□ -1.05
Shroom4-201ENSMUST00000089520 Kdm5dQ62240 1548 aa8.47□□□□□ -1.05
Shroom4-201ENSMUST00000089520 Rangap1P46061 589 aaKnown RBP8.47□□□□□ -1.05
Shroom4-201ENSMUST00000089520 Rgl3Q3UYI5 709 aa8.46□□□□□ -1.06
Shroom4-201ENSMUST00000089520 Irx6Q9ER75 438 aa8.46□□□□□ -1.06
Shroom4-201ENSMUST00000089520 Psme1P97371 249 aa8.45□□□□□ -1.06
Shroom4-201ENSMUST00000089520 Mia2Q91ZV0 1396 aa8.45□□□□□ -1.06
Shroom4-201ENSMUST00000089520 Stk24Q99KH8 431 aa8.45□□□□□ -1.06
Shroom4-201ENSMUST00000089520 PnnO35691 725 aaKnown RBP8.45□□□□□ -1.06
Shroom4-201ENSMUST00000089520 Eid3Q3V124 375 aa8.44□□□□□ -1.06
Shroom4-201ENSMUST00000089520 Ppargc1bQ8VHJ7 1014 aa8.44□□□□□ -1.06
Shroom4-201ENSMUST00000089520 DaxxO35613 739 aa8.44□□□□□ -1.06
Shroom4-201ENSMUST00000089520 Pde3bQ61409 1100 aa8.43□□□□□ -1.06
Shroom4-201ENSMUST00000089520 Nol10Q5RJG1 687 aaKnown RBP8.43□□□□□ -1.06
Shroom4-201ENSMUST00000089520 Pabpn1Q8CCS6 302 aaKnown RBP8.43□□□□□ -1.06
Shroom4-201ENSMUST00000089520 Kif27Q7M6Z4 1394 aa8.41□□□□□ -1.06
Shroom4-201ENSMUST00000089520 Rtf1A2AQ19 715 aaKnown RBP8.41□□□□□ -1.06
Shroom4-201ENSMUST00000089520 CatipB9EKE5 520 aa8.41□□□□□ -1.06
Shroom4-201ENSMUST00000089520 Rad21Q61550 635 aaKnown RBP8.41□□□□□ -1.06
Shroom4-201ENSMUST00000089520 Phldb1Q6PDH0 1371 aaKnown RBP8.4□□□□□ -1.06
Shroom4-201ENSMUST00000089520 Card11Q8CIS0 1159 aa8.4□□□□□ -1.06
Shroom4-201ENSMUST00000089520 Rtn4Q99P72 1162 aaKnown RBP8.4□□□□□ -1.06
Shroom4-201ENSMUST00000089520 Pes1Q9EQ61 584 aaKnown RBP8.4□□□□□ -1.06
Shroom4-201ENSMUST00000089520 Txndc2Q6P902 515 aa8.4□□□□□ -1.06
Shroom4-201ENSMUST00000089520 Ythdc1E9Q5K9 736 aaKnown RBP8.38□□□□□ -1.07
Shroom4-201ENSMUST00000089520 Arid3cA6PWV5 409 aa8.38□□□□□ -1.07
Shroom4-201ENSMUST00000089520 Fhad1A6PWD2 1420 aa8.38□□□□□ -1.07
Shroom4-201ENSMUST00000089520 Pcgf6Q99NA9 353 aa8.38□□□□□ -1.07
Shroom4-201ENSMUST00000089520 Q8BT18 775 aa8.37□□□□□ -1.07
Shroom4-201ENSMUST00000089520 Ppm1fQ8CGA0 452 aa8.37□□□□□ -1.07
Shroom4-201ENSMUST00000089520 ArxO35085 564 aa8.36□□□□□ -1.07
Shroom4-201ENSMUST00000089520 Fmn1Q05860 1466 aa8.36□□□□□ -1.07
Shroom4-201ENSMUST00000089520 Trim26Q99PN3 545 aa8.36□□□□□ -1.07
Shroom4-201ENSMUST00000089520 Map7O88735 730 aa8.36□□□□□ -1.07
Shroom4-201ENSMUST00000089520 WrnO09053 1401 aa8.36□□□□□ -1.07
Shroom4-201ENSMUST00000089520 Rpap1Q80TE0 1409 aa8.35□□□□□ -1.07
Shroom4-201ENSMUST00000089520 Hmgb2P30681 210 aaKnown RBP8.35□□□□□ -1.07
Shroom4-201ENSMUST00000089520 Ap3b2Q9JME5 1082 aa8.35□□□□□ -1.07
Shroom4-201ENSMUST00000089520 Spag9Q58A65 1321 aaKnown RBP8.34□□□□□ -1.07
Shroom4-201ENSMUST00000089520 HnrnpuQ8VEK3 800 aaKnown RBP8.34□□□□□ -1.07
Shroom4-201ENSMUST00000089520 Mrs2Q5NCE8 434 aa8.34□□□□□ -1.07
Shroom4-201ENSMUST00000089520 Supt5hO55201 1082 aaKnown RBP8.34□□□□□ -1.08
Shroom4-201ENSMUST00000089520 Stard8Q8K031 1019 aa8.33□□□□□ -1.08
Shroom4-201ENSMUST00000089520 Clstn1Q9EPL2 979 aa8.33□□□□□ -1.08
Shroom4-201ENSMUST00000089520 Sart3Q9JLI8 962 aaKnown RBP8.33□□□□□ -1.08
Shroom4-201ENSMUST00000089520 MccE9PWI3 1003 aa8.33□□□□□ -1.08
Shroom4-201ENSMUST00000089520 Rab11fip3Q8CHD8 1047 aa8.32□□□□□ -1.08
Shroom4-201ENSMUST00000089520 Cux2P70298 1426 aa8.32□□□□□ -1.08
Shroom4-201ENSMUST00000089520 Sh3bp5Q9Z131 463 aa8.31□□□□□ -1.08
Shroom4-201ENSMUST00000089520 DekQ7TNV0 380 aaKnown RBP8.31□□□□□ -1.08
Shroom4-201ENSMUST00000089520 Map4P27546 1125 aaKnown RBP8.31□□□□□ -1.08
Shroom4-201ENSMUST00000089520 Baz1bQ9Z277 1479 aa8.31□□□□□ -1.08
Shroom4-201ENSMUST00000089520 Sycp2Q9CUU3 1500 aa8.3□□□□□ -1.08
Shroom4-201ENSMUST00000089520 Gtf2e1Q9D0D5 440 aa8.3□□□□□ -1.08
Shroom4-201ENSMUST00000089520 Fyco1Q8VDC1 1437 aa8.3□□□□□ -1.08
Shroom4-201ENSMUST00000089520 Fbln2P37889 1221 aa8.3□□□□□ -1.08
Shroom4-201ENSMUST00000089520 Smarca2Q6DIC0 1577 aa8.29□□□□□ -1.08
Shroom4-201ENSMUST00000089520 Ccnb3Q810T2 1396 aa8.29□□□□□ -1.08
Shroom4-201ENSMUST00000089520 Ncoa2Q61026 1462 aa8.29□□□□□ -1.08
Shroom4-201ENSMUST00000089520 Polr1aO35134 1717 aaKnown RBP8.29□□□□□ -1.08
Shroom4-201ENSMUST00000089520 Atad2bE9Q166 1460 aaKnown RBP8.29□□□□□ -1.08
Shroom4-201ENSMUST00000089520 Ddx11Q6AXC6 880 aa8.28□□□□□ -1.08
Shroom4-201ENSMUST00000089520 Ciz1Q8VEH2 845 aa8.27□□□□□ -1.09
Shroom4-201ENSMUST00000089520 Crybg2B7ZCC2 1516 aa8.27□□□□□ -1.09
Shroom4-201ENSMUST00000089520 1700019A02RikA0A087WPV9 146 aa8.27□□□□□ -1.09
Shroom4-201ENSMUST00000089520 Mapk8ip2Q9ERE9 830 aa8.27□□□□□ -1.09
Shroom4-201ENSMUST00000089520 Smarca4Q3TKT4 1613 aaKnown RBP8.27□□□□□ -1.09
Shroom4-201ENSMUST00000089520 Csrnp3P59055 597 aa8.27□□□□□ -1.09
Shroom4-201ENSMUST00000089520 KnstrnQ9D9Z1 312 aaKnown RBP8.27□□□□□ -1.09
Shroom4-201ENSMUST00000089520 Bcl11bQ99PV8 884 aa8.26□□□□□ -1.09
Shroom4-201ENSMUST00000089520 Plekhh2Q8C115 1491 aa8.26□□□□□ -1.09
Shroom4-201ENSMUST00000089520 Hsp90ab1P11499 724 aaKnown RBP8.26□□□□□ -1.09
Retrieved 100 of 22,080 RNA–protein pairs in 82.3 ms