RNA–Protein interactions for RNA: ENSMUST00000089520.2

Shroom4-201, Transcript of Protein Shroom4, mousemouse

TSL 1 (best) BASIC

Gene Shroom4, Length 8,201 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom4-201ENSMUST00000089520 Rhox8Q6VSS7 320 aa11.46□□□□□ -0.58
Shroom4-201ENSMUST00000089520 Esf1Q3V1V3 845 aaKnown RBP10.4□□□□□ -0.74
Shroom4-201ENSMUST00000089520 Zeb1Q64318 1117 aa10.25□□□□□ -0.77
Shroom4-201ENSMUST00000089520 Cngb1E1AZ71 1325 aa10.18□□□□□ -0.78
Shroom4-201ENSMUST00000089520 Ube2uB1AUC4 352 aa10.18□□□□□ -0.78
Shroom4-201ENSMUST00000089520 Trim41Q5NCC3 630 aa10.12□□□□□ -0.79
Shroom4-201ENSMUST00000089520 Npm2Q80W85 207 aa10.11□□□□□ -0.79
Shroom4-201ENSMUST00000089520 Rpgrip1Q9EPQ2 1331 aa10.09□□□□□ -0.79
Shroom4-201ENSMUST00000089520 NischQ80TM9 1593 aa10.04□□□□□ -0.8
Shroom4-201ENSMUST00000089520 Ccdc136Q3TVA9 1136 aa10.01□□□□□ -0.81
Shroom4-201ENSMUST00000089520 Las1lA2BE28 776 aaKnown RBP10□□□□□ -0.81
Shroom4-201ENSMUST00000089520 Pelp1Q9DBD5 1123 aaKnown RBP9.95□□□□□ -0.82
Shroom4-201ENSMUST00000089520 Myt1lP97500 1187 aa9.81□□□□□ -0.84
Shroom4-201ENSMUST00000089520 Gab3Q8BSM5 595 aa9.76□□□□□ -0.85
Shroom4-201ENSMUST00000089520 Wdr66E9Q743 1299 aa9.75□□□□□ -0.85
Shroom4-201ENSMUST00000089520 Rtl1Q7M732 1744 aa9.71□□□□□ -0.85
Shroom4-201ENSMUST00000089520 Stra8P70278 393 aa9.61□□□□□ -0.87
Shroom4-201ENSMUST00000089520 Il27Q8K3I6 234 aa9.61□□□□□ -0.87
Shroom4-201ENSMUST00000089520 Ehmt2Q9Z148 1263 aaKnown RBP9.58□□□□□ -0.88
Shroom4-201ENSMUST00000089520 Abcc9P70170 1546 aa9.57□□□□□ -0.88
Shroom4-201ENSMUST00000089520 Anp32bQ9EST5 272 aaKnown RBP9.56□□□□□ -0.88
Shroom4-201ENSMUST00000089520 Ccdc180J3QNE4 1664 aa9.54□□□□□ -0.88
Shroom4-201ENSMUST00000089520 NclP09405 707 aaKnown RBP9.51□□□□□ -0.89
Shroom4-201ENSMUST00000089520 Os9Q8K2C7 672 aa9.5□□□□□ -0.89
Shroom4-201ENSMUST00000089520 Zcchc6Q5BLK4 1491 aaKnown RBP9.47□□□□□ -0.89
Shroom4-201ENSMUST00000089520 Gm35339A0A140LHH9 1649 aa9.46□□□□□ -0.9
Shroom4-201ENSMUST00000089520 Npm1Q61937 292 aaKnown RBP9.45□□□□□ -0.9
Shroom4-201ENSMUST00000089520 Gm13697A2AK42 830 aa9.45□□□□□ -0.9
Shroom4-201ENSMUST00000089520 Hdac5Q9Z2V6 1113 aa9.42□□□□□ -0.9
Shroom4-201ENSMUST00000089520 NefmP08553 848 aa9.42□□□□□ -0.9
Shroom4-201ENSMUST00000089520 UbtfP25976 765 aaKnown RBP9.39□□□□□ -0.91
Shroom4-201ENSMUST00000089520 Ttbk1Q6PCN3 1308 aa9.36□□□□□ -0.91
Shroom4-201ENSMUST00000089520 Fam50aQ9WV03 339 aaKnown RBP9.3□□□□□ -0.92
Shroom4-201ENSMUST00000089520 NrdcQ8BHG1 1161 aa9.29□□□□□ -0.92
Shroom4-201ENSMUST00000089520 Slc24a1Q91WD8 1130 aa9.28□□□□□ -0.92
Shroom4-201ENSMUST00000089520 NeflP08551 543 aa9.28□□□□□ -0.92
Shroom4-201ENSMUST00000089520 HrcG5E8J6 738 aa9.27□□□□□ -0.93
Shroom4-201ENSMUST00000089520 Gm13695A2AK44 830 aa9.25□□□□□ -0.93
Shroom4-201ENSMUST00000089520 Ap3b1Q9Z1T1 1105 aa9.23□□□□□ -0.93
Shroom4-201ENSMUST00000089520 DiexfQ8BTT6 772 aaKnown RBP9.22□□□□□ -0.93
Shroom4-201ENSMUST00000089520 Hnrnpul2Q00PI9 745 aaKnown RBP9.18□□□□□ -0.94
Shroom4-201ENSMUST00000089520 Neurod1Q60867 357 aa9.18□□□□□ -0.94
Shroom4-201ENSMUST00000089520 Ifnlr1Q8CGK5 535 aa9.18□□□□□ -0.94
Shroom4-201ENSMUST00000089520 Atp1b4Q99ME6 356 aa9.17□□□□□ -0.94
Shroom4-201ENSMUST00000089520 4930567H17RikQ3V0K5 233 aa9.16□□□□□ -0.94
Shroom4-201ENSMUST00000089520 Safb2Q80YR5 991 aaKnown RBP9.14□□□□□ -0.95
Shroom4-201ENSMUST00000089520 Ubl4bQ9CQ84 188 aa9.1□□□□□ -0.95
Shroom4-201ENSMUST00000089520 CenpbP27790 599 aa9.1□□□□□ -0.95
Shroom4-201ENSMUST00000089520 Brd4Q9ESU6 1400 aaKnown RBP9.1□□□□□ -0.95
Shroom4-201ENSMUST00000089520 Amer1Q7TS75 1132 aa9.09□□□□□ -0.96
Shroom4-201ENSMUST00000089520 Erich6D3Z6S9 713 aa9.06□□□□□ -0.96
Shroom4-201ENSMUST00000089520 Cdk11bP24788 784 aaKnown RBP9.06□□□□□ -0.96
Shroom4-201ENSMUST00000089520 Plppr3Q7TPB0 716 aa9.06□□□□□ -0.96
Shroom4-201ENSMUST00000089520 Zbtb7cQ8VCZ7 619 aa9.06□□□□□ -0.96
Shroom4-201ENSMUST00000089520 Tnnt3Q9QZ47 272 aa9.05□□□□□ -0.96
Shroom4-201ENSMUST00000089520 Ercc6F8VPZ5 1481 aa9.02□□□□□ -0.97
Shroom4-201ENSMUST00000089520 Nlrp6Q91WS2 869 aa9.01□□□□□ -0.97
Shroom4-201ENSMUST00000089520 Acin1Q9JIX8 1338 aaKnown RBP9.01□□□□□ -0.97
Shroom4-201ENSMUST00000089520 Abcc8B2RUS7 1588 aa9□□□□□ -0.97
Shroom4-201ENSMUST00000089520 Chic1Q8CBW7 227 aa9□□□□□ -0.97
Shroom4-201ENSMUST00000089520 Clstn2Q9ER65 966 aa8.99□□□□□ -0.97
Shroom4-201ENSMUST00000089520 Rb1cc1Q9ESK9 1588 aa8.98□□□□□ -0.97
Shroom4-201ENSMUST00000089520 TonslQ6NZL6 1363 aa8.96□□□□□ -0.97
Shroom4-201ENSMUST00000089520 Lmod2Q3UHZ5 550 aa8.96□□□□□ -0.98
Shroom4-201ENSMUST00000089520 Fkbp15Q6P9Q6 1216 aaKnown RBP8.96□□□□□ -0.98
Shroom4-201ENSMUST00000089520 Ccer2J3QPU5 274 aa8.92□□□□□ -0.98
Shroom4-201ENSMUST00000089520 Eif5bQ05D44 1216 aaKnown RBP8.89□□□□□ -0.99
Shroom4-201ENSMUST00000089520 NacadQ5SWP3 1504 aa8.88□□□□□ -0.99
Shroom4-201ENSMUST00000089520 4933416C03RikQ3V063 378 aa8.86□□□□□ -0.99
Shroom4-201ENSMUST00000089520 Ccdc18Q640L5 1455 aa8.86□□□□□ -0.99
Shroom4-201ENSMUST00000089520 Zfp777B9EKF4 885 aa8.83□□□□□ -1
Shroom4-201ENSMUST00000089520 Rsf1E9PWW9 1441 aaKnown RBP8.83□□□□□ -1
Shroom4-201ENSMUST00000089520 P3h3Q8CG70 732 aa8.8□□□□□ -1
Shroom4-201ENSMUST00000089520 Cep164Q5DU05 1446 aa8.8□□□□□ -1
Shroom4-201ENSMUST00000089520 Plekhg3Q4VAC9 1341 aa8.79□□□□□ -1
Shroom4-201ENSMUST00000089520 Clip1Q922J3 1391 aa8.79□□□□□ -1
Shroom4-201ENSMUST00000089520 MyclP10166 368 aa8.78□□□□□ -1
Shroom4-201ENSMUST00000089520 Nop58Q6DFW4 536 aaKnown RBP8.77□□□□□ -1
Shroom4-201ENSMUST00000089520 IqubQ8CDK3 788 aa8.76□□□□□ -1.01
Shroom4-201ENSMUST00000089520 Polr3glQ8R0C0 218 aa8.76□□□□□ -1.01
Shroom4-201ENSMUST00000089520 Rtl5Q5DTT4 599 aa8.76□□□□□ -1.01
Shroom4-201ENSMUST00000089520 Znf326O88291 580 aa8.75□□□□□ -1.01
Shroom4-201ENSMUST00000089520 Zbtb4Q5F293 982 aa8.74□□□□□ -1.01
Shroom4-201ENSMUST00000089520 Kif15Q6P9L6 1387 aa8.74□□□□□ -1.01
Shroom4-201ENSMUST00000089520 Upf2A2AT37 1269 aaKnown RBP8.72□□□□□ -1.01
Shroom4-201ENSMUST00000089520 Prdm10Q3UTQ7 1184 aa8.72□□□□□ -1.01
Shroom4-201ENSMUST00000089520 Hsp90aa1P07901 733 aaKnown RBP8.72□□□□□ -1.01
Shroom4-201ENSMUST00000089520 Ppp1r18Q8BQ30 594 aa8.71□□□□□ -1.02
Shroom4-201ENSMUST00000089520 Eif4g2Q62448 906 aaKnown RBP8.7□□□□□ -1.02
Shroom4-201ENSMUST00000089520 Pds5bQ4VA53 1446 aaKnown RBP8.69□□□□□ -1.02
Shroom4-201ENSMUST00000089520 Rsph4aQ8BYM7 716 aa8.68□□□□□ -1.02
Shroom4-201ENSMUST00000089520 Fgd1P52734 960 aa8.67□□□□□ -1.02
Shroom4-201ENSMUST00000089520 Arhgap27A2AB59 869 aa8.67□□□□□ -1.02
Shroom4-201ENSMUST00000089520 BlmO88700 1416 aa8.66□□□□□ -1.02
Shroom4-201ENSMUST00000089520 HdgfP51859 237 aaKnown RBP8.65□□□□□ -1.02
Shroom4-201ENSMUST00000089520 Baz1aO88379 1555 aa8.64□□□□□ -1.03
Shroom4-201ENSMUST00000089520 Mier1Q5UAK0 511 aa8.64□□□□□ -1.03
Shroom4-201ENSMUST00000089520 Srpk2O54781 681 aaKnown RBP8.63□□□□□ -1.03
Shroom4-201ENSMUST00000089520 Ggt6Q6PDE7 497 aa8.63□□□□□ -1.03
Shroom4-201ENSMUST00000089520 Iqcf3Q9D498 203 aa8.63□□□□□ -1.03
Retrieved 100 of 22,080 RNA–protein pairs in 59 ms