RNA–Protein interactions for RNA: ENSMUST00000089520.2

Shroom4-201, Transcript of Protein Shroom4, mousemouse

TSL 1 (best) BASIC

Gene Shroom4, Length 8,201 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom4-201ENSMUST00000089520 Rhox8Q6VSS7 320 aa11.46□□□□□ -0.58
Shroom4-201ENSMUST00000089520 Esf1Q3V1V3 845 aaKnown RBP10.4□□□□□ -0.74
Shroom4-201ENSMUST00000089520 Zeb1Q64318 1117 aa10.25□□□□□ -0.77
Shroom4-201ENSMUST00000089520 Cngb1E1AZ71 1325 aa10.18□□□□□ -0.78
Shroom4-201ENSMUST00000089520 Ube2uB1AUC4 352 aa10.18□□□□□ -0.78
Shroom4-201ENSMUST00000089520 Trim41Q5NCC3 630 aa10.12□□□□□ -0.79
Shroom4-201ENSMUST00000089520 Npm2Q80W85 207 aa10.11□□□□□ -0.79
Shroom4-201ENSMUST00000089520 Rpgrip1Q9EPQ2 1331 aa10.09□□□□□ -0.79
Shroom4-201ENSMUST00000089520 NischQ80TM9 1593 aa10.04□□□□□ -0.8
Shroom4-201ENSMUST00000089520 Ccdc136Q3TVA9 1136 aa10.01□□□□□ -0.81
Shroom4-201ENSMUST00000089520 Las1lA2BE28 776 aaKnown RBP10□□□□□ -0.81
Shroom4-201ENSMUST00000089520 Pelp1Q9DBD5 1123 aaKnown RBP9.95□□□□□ -0.82
Shroom4-201ENSMUST00000089520 Myt1lP97500 1187 aa9.81□□□□□ -0.84
Shroom4-201ENSMUST00000089520 Gab3Q8BSM5 595 aa9.76□□□□□ -0.85
Shroom4-201ENSMUST00000089520 Wdr66E9Q743 1299 aa9.75□□□□□ -0.85
Shroom4-201ENSMUST00000089520 Rtl1Q7M732 1744 aa9.71□□□□□ -0.85
Shroom4-201ENSMUST00000089520 Stra8P70278 393 aa9.61□□□□□ -0.87
Shroom4-201ENSMUST00000089520 Il27Q8K3I6 234 aa9.61□□□□□ -0.87
Shroom4-201ENSMUST00000089520 Ehmt2Q9Z148 1263 aaKnown RBP9.58□□□□□ -0.88
Shroom4-201ENSMUST00000089520 Abcc9P70170 1546 aa9.57□□□□□ -0.88
Shroom4-201ENSMUST00000089520 Anp32bQ9EST5 272 aaKnown RBP9.56□□□□□ -0.88
Shroom4-201ENSMUST00000089520 Ccdc180J3QNE4 1664 aa9.54□□□□□ -0.88
Shroom4-201ENSMUST00000089520 NclP09405 707 aaKnown RBP9.51□□□□□ -0.89
Shroom4-201ENSMUST00000089520 Os9Q8K2C7 672 aa9.5□□□□□ -0.89
Shroom4-201ENSMUST00000089520 Zcchc6Q5BLK4 1491 aaKnown RBP9.47□□□□□ -0.89
Shroom4-201ENSMUST00000089520 Gm35339A0A140LHH9 1649 aa9.46□□□□□ -0.9
Shroom4-201ENSMUST00000089520 Npm1Q61937 292 aaKnown RBP9.45□□□□□ -0.9
Shroom4-201ENSMUST00000089520 Gm13697A2AK42 830 aa9.45□□□□□ -0.9
Shroom4-201ENSMUST00000089520 Hdac5Q9Z2V6 1113 aa9.42□□□□□ -0.9
Shroom4-201ENSMUST00000089520 NefmP08553 848 aa9.42□□□□□ -0.9
Shroom4-201ENSMUST00000089520 UbtfP25976 765 aaKnown RBP9.39□□□□□ -0.91
Shroom4-201ENSMUST00000089520 Ttbk1Q6PCN3 1308 aa9.36□□□□□ -0.91
Shroom4-201ENSMUST00000089520 Fam50aQ9WV03 339 aaKnown RBP9.3□□□□□ -0.92
Shroom4-201ENSMUST00000089520 NrdcQ8BHG1 1161 aa9.29□□□□□ -0.92
Shroom4-201ENSMUST00000089520 Slc24a1Q91WD8 1130 aa9.28□□□□□ -0.92
Shroom4-201ENSMUST00000089520 NeflP08551 543 aa9.28□□□□□ -0.92
Shroom4-201ENSMUST00000089520 HrcG5E8J6 738 aa9.27□□□□□ -0.93
Shroom4-201ENSMUST00000089520 Gm13695A2AK44 830 aa9.25□□□□□ -0.93
Shroom4-201ENSMUST00000089520 Ap3b1Q9Z1T1 1105 aa9.23□□□□□ -0.93
Shroom4-201ENSMUST00000089520 DiexfQ8BTT6 772 aaKnown RBP9.22□□□□□ -0.93
Shroom4-201ENSMUST00000089520 Hnrnpul2Q00PI9 745 aaKnown RBP9.18□□□□□ -0.94
Shroom4-201ENSMUST00000089520 Neurod1Q60867 357 aa9.18□□□□□ -0.94
Shroom4-201ENSMUST00000089520 Ifnlr1Q8CGK5 535 aa9.18□□□□□ -0.94
Shroom4-201ENSMUST00000089520 Atp1b4Q99ME6 356 aa9.17□□□□□ -0.94
Shroom4-201ENSMUST00000089520 4930567H17RikQ3V0K5 233 aa9.16□□□□□ -0.94
Shroom4-201ENSMUST00000089520 Safb2Q80YR5 991 aaKnown RBP9.14□□□□□ -0.95
Shroom4-201ENSMUST00000089520 Ubl4bQ9CQ84 188 aa9.1□□□□□ -0.95
Shroom4-201ENSMUST00000089520 CenpbP27790 599 aa9.1□□□□□ -0.95
Shroom4-201ENSMUST00000089520 Brd4Q9ESU6 1400 aaKnown RBP9.1□□□□□ -0.95
Shroom4-201ENSMUST00000089520 Amer1Q7TS75 1132 aa9.09□□□□□ -0.96
Shroom4-201ENSMUST00000089520 Erich6D3Z6S9 713 aa9.06□□□□□ -0.96
Shroom4-201ENSMUST00000089520 Cdk11bP24788 784 aaKnown RBP9.06□□□□□ -0.96
Shroom4-201ENSMUST00000089520 Plppr3Q7TPB0 716 aa9.06□□□□□ -0.96
Shroom4-201ENSMUST00000089520 Zbtb7cQ8VCZ7 619 aa9.06□□□□□ -0.96
Shroom4-201ENSMUST00000089520 Tnnt3Q9QZ47 272 aa9.05□□□□□ -0.96
Shroom4-201ENSMUST00000089520 Ercc6F8VPZ5 1481 aa9.02□□□□□ -0.97
Shroom4-201ENSMUST00000089520 Nlrp6Q91WS2 869 aa9.01□□□□□ -0.97
Shroom4-201ENSMUST00000089520 Acin1Q9JIX8 1338 aaKnown RBP9.01□□□□□ -0.97
Shroom4-201ENSMUST00000089520 Abcc8B2RUS7 1588 aa9□□□□□ -0.97
Shroom4-201ENSMUST00000089520 Chic1Q8CBW7 227 aa9□□□□□ -0.97
Shroom4-201ENSMUST00000089520 Clstn2Q9ER65 966 aa8.99□□□□□ -0.97
Shroom4-201ENSMUST00000089520 Rb1cc1Q9ESK9 1588 aa8.98□□□□□ -0.97
Shroom4-201ENSMUST00000089520 TonslQ6NZL6 1363 aa8.96□□□□□ -0.97
Shroom4-201ENSMUST00000089520 Lmod2Q3UHZ5 550 aa8.96□□□□□ -0.98
Shroom4-201ENSMUST00000089520 Fkbp15Q6P9Q6 1216 aaKnown RBP8.96□□□□□ -0.98
Shroom4-201ENSMUST00000089520 Ccer2J3QPU5 274 aa8.92□□□□□ -0.98
Shroom4-201ENSMUST00000089520 Eif5bQ05D44 1216 aaKnown RBP8.89□□□□□ -0.99
Shroom4-201ENSMUST00000089520 NacadQ5SWP3 1504 aa8.88□□□□□ -0.99
Shroom4-201ENSMUST00000089520 4933416C03RikQ3V063 378 aa8.86□□□□□ -0.99
Shroom4-201ENSMUST00000089520 Ccdc18Q640L5 1455 aa8.86□□□□□ -0.99
Shroom4-201ENSMUST00000089520 Zfp777B9EKF4 885 aa8.83□□□□□ -1
Shroom4-201ENSMUST00000089520 Rsf1E9PWW9 1441 aaKnown RBP8.83□□□□□ -1
Shroom4-201ENSMUST00000089520 P3h3Q8CG70 732 aa8.8□□□□□ -1
Shroom4-201ENSMUST00000089520 Cep164Q5DU05 1446 aa8.8□□□□□ -1
Shroom4-201ENSMUST00000089520 Plekhg3Q4VAC9 1341 aa8.79□□□□□ -1
Shroom4-201ENSMUST00000089520 Clip1Q922J3 1391 aa8.79□□□□□ -1
Shroom4-201ENSMUST00000089520 MyclP10166 368 aa8.78□□□□□ -1
Shroom4-201ENSMUST00000089520 Nop58Q6DFW4 536 aaKnown RBP8.77□□□□□ -1
Shroom4-201ENSMUST00000089520 IqubQ8CDK3 788 aa8.76□□□□□ -1.01
Shroom4-201ENSMUST00000089520 Polr3glQ8R0C0 218 aa8.76□□□□□ -1.01
Shroom4-201ENSMUST00000089520 Rtl5Q5DTT4 599 aa8.76□□□□□ -1.01
Shroom4-201ENSMUST00000089520 Znf326O88291 580 aa8.75□□□□□ -1.01
Shroom4-201ENSMUST00000089520 Zbtb4Q5F293 982 aa8.74□□□□□ -1.01
Shroom4-201ENSMUST00000089520 Kif15Q6P9L6 1387 aa8.74□□□□□ -1.01
Shroom4-201ENSMUST00000089520 Upf2A2AT37 1269 aaKnown RBP8.72□□□□□ -1.01
Shroom4-201ENSMUST00000089520 Prdm10Q3UTQ7 1184 aa8.72□□□□□ -1.01
Shroom4-201ENSMUST00000089520 Hsp90aa1P07901 733 aaKnown RBP8.72□□□□□ -1.01
Shroom4-201ENSMUST00000089520 Ppp1r18Q8BQ30 594 aa8.71□□□□□ -1.02
Shroom4-201ENSMUST00000089520 Eif4g2Q62448 906 aaKnown RBP8.7□□□□□ -1.02
Shroom4-201ENSMUST00000089520 Pds5bQ4VA53 1446 aaKnown RBP8.69□□□□□ -1.02
Shroom4-201ENSMUST00000089520 Rsph4aQ8BYM7 716 aa8.68□□□□□ -1.02
Shroom4-201ENSMUST00000089520 Fgd1P52734 960 aa8.67□□□□□ -1.02
Shroom4-201ENSMUST00000089520 Arhgap27A2AB59 869 aa8.67□□□□□ -1.02
Shroom4-201ENSMUST00000089520 BlmO88700 1416 aa8.66□□□□□ -1.02
Shroom4-201ENSMUST00000089520 HdgfP51859 237 aaKnown RBP8.65□□□□□ -1.02
Shroom4-201ENSMUST00000089520 Baz1aO88379 1555 aa8.64□□□□□ -1.03
Shroom4-201ENSMUST00000089520 Mier1Q5UAK0 511 aa8.64□□□□□ -1.03
Shroom4-201ENSMUST00000089520 Srpk2O54781 681 aaKnown RBP8.63□□□□□ -1.03
Shroom4-201ENSMUST00000089520 Ggt6Q6PDE7 497 aa8.63□□□□□ -1.03
Shroom4-201ENSMUST00000089520 Iqcf3Q9D498 203 aa8.63□□□□□ -1.03
Retrieved 100 of 22,080 RNA–protein pairs in 13.9 ms