RNA–Protein interactions for RNA: ENSMUST00000088716.11

Smarcc1-201, Transcript of SWI/SNF complex subunit SMARCC1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Smarcc1, Length 5,717 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1-201ENSMUST00000088716 Aplp2Q06335 707 aa28.75■■■□□ 2.19
Smarcc1-201ENSMUST00000088716 P3h3Q8CG70 732 aa28.7■■■□□ 2.19
Smarcc1-201ENSMUST00000088716 Wdr43Q6ZQL4 677 aaKnown RBP28.7■■■□□ 2.18
Smarcc1-201ENSMUST00000088716 Rgl3Q3UYI5 709 aa28.67■■■□□ 2.18
Smarcc1-201ENSMUST00000088716 Fgd1P52734 960 aa28.67■■■□□ 2.18
Smarcc1-201ENSMUST00000088716 NacadQ5SWP3 1504 aa28.64■■■□□ 2.18
Smarcc1-201ENSMUST00000088716 Kif15Q6P9L6 1387 aa28.6■■■□□ 2.17
Smarcc1-201ENSMUST00000088716 Rsf1E9PWW9 1441 aaKnown RBP28.59■■■□□ 2.17
Smarcc1-201ENSMUST00000088716 Hsp90aa1P07901 733 aaKnown RBP28.57■■■□□ 2.16
Smarcc1-201ENSMUST00000088716 Trim26Q99PN3 545 aa28.56■■■□□ 2.16
Smarcc1-201ENSMUST00000088716 Golga3P55937 1487 aa28.51■■■□□ 2.16
Smarcc1-201ENSMUST00000088716 DekQ7TNV0 380 aaKnown RBP28.47■■■□□ 2.15
Smarcc1-201ENSMUST00000088716 IqubQ8CDK3 788 aa28.47■■■□□ 2.15
Smarcc1-201ENSMUST00000088716 Ccdc18Q640L5 1455 aa28.44■■■□□ 2.14
Smarcc1-201ENSMUST00000088716 Ercc6F8VPZ5 1481 aa28.42■■■□□ 2.14
Smarcc1-201ENSMUST00000088716 Arhgap27A2AB59 869 aa28.42■■■□□ 2.14
Smarcc1-201ENSMUST00000088716 Eea1Q8BL66 1411 aa28.41■■■□□ 2.14
Smarcc1-201ENSMUST00000088716 Kdm2aP59997 1161 aa28.41■■■□□ 2.14
Smarcc1-201ENSMUST00000088716 Baz1aO88379 1555 aa28.4■■■□□ 2.14
Smarcc1-201ENSMUST00000088716 CatipB9EKE5 520 aa28.39■■■□□ 2.14
Smarcc1-201ENSMUST00000088716 Srpk2O54781 681 aaKnown RBP28.38■■■□□ 2.13
Smarcc1-201ENSMUST00000088716 Grwd1Q810D6 446 aaKnown RBP28.38■■■□□ 2.13
Smarcc1-201ENSMUST00000088716 Ofd1Q80Z25 1017 aa28.36■■■□□ 2.13
Smarcc1-201ENSMUST00000088716 Vsig10D3YX43 558 aa28.35■■■□□ 2.13
Smarcc1-201ENSMUST00000088716 Mroh3A0A1D5RM54 893 aa28.34■■■□□ 2.13
Smarcc1-201ENSMUST00000088716 Hsp90ab1P11499 724 aaKnown RBP28.33■■■□□ 2.13
Smarcc1-201ENSMUST00000088716 Card11Q8CIS0 1159 aa28.32■■■□□ 2.12
Smarcc1-201ENSMUST00000088716 Irx6Q9ER75 438 aa28.32■■■□□ 2.12
Smarcc1-201ENSMUST00000088716 Trim30dE9PWL0 497 aa28.31■■■□□ 2.12
Smarcc1-201ENSMUST00000088716 Gm20521D3Z5F7 333 aa28.28■■■□□ 2.12
Smarcc1-201ENSMUST00000088716 Exosc9Q9JHI7 438 aaKnown RBP28.27■■■□□ 2.12
Smarcc1-201ENSMUST00000088716 CanxP35564 591 aaKnown RBP28.27■■■□□ 2.12
Smarcc1-201ENSMUST00000088716 Aebp2Q9Z248 504 aaKnown RBP28.26■■■□□ 2.11
Smarcc1-201ENSMUST00000088716 Cwc22Q8C5N3 908 aaKnown RBP28.24■■■□□ 2.11
Smarcc1-201ENSMUST00000088716 Mtus2Q3UHD3 1353 aa28.22■■■□□ 2.11
Smarcc1-201ENSMUST00000088716 Rrp7aQ9D1C9 280 aaKnown RBP28.22■■■□□ 2.11
Smarcc1-201ENSMUST00000088716 Mapk8ip3Q9ESN9 1337 aa28.17■■■□□ 2.1
Smarcc1-201ENSMUST00000088716 Trim44Q9QXA7 346 aa28.14■■■□□ 2.1
Smarcc1-201ENSMUST00000088716 Apbb1Q9QXJ1 710 aa28.14■■■□□ 2.09
Smarcc1-201ENSMUST00000088716 Ythdc1E9Q5K9 736 aaKnown RBP28.13■■■□□ 2.09
Smarcc1-201ENSMUST00000088716 Ccdc9Q8VC31 543 aaKnown RBP28.11■■■□□ 2.09
Smarcc1-201ENSMUST00000088716 Neurod2Q62414 383 aa28.11■■■□□ 2.09
Smarcc1-201ENSMUST00000088716 Stk24Q99KH8 431 aa28.09■■■□□ 2.09
Smarcc1-201ENSMUST00000088716 Stag3O70576 1240 aa28.07■■■□□ 2.08
Smarcc1-201ENSMUST00000088716 Mia2Q91ZV0 1396 aa28.06■■■□□ 2.08
Smarcc1-201ENSMUST00000088716 Arid4bA2CG63 1314 aaKnown RBP28.06■■■□□ 2.08
Smarcc1-201ENSMUST00000088716 Lmod3E9QA62 571 aa28.06■■■□□ 2.08
Smarcc1-201ENSMUST00000088716 Znf326O88291 580 aa28.01■■■□□ 2.07
Smarcc1-201ENSMUST00000088716 NgefQ8CHT1 710 aa28.01■■■□□ 2.07
Smarcc1-201ENSMUST00000088716 PtmaP26350 111 aa27.99■■■□□ 2.07
Smarcc1-201ENSMUST00000088716 Gm6268A2A3U9 297 aa27.97■■■□□ 2.07
Smarcc1-201ENSMUST00000088716 Iqcf3Q9D498 203 aa27.97■■■□□ 2.07
Smarcc1-201ENSMUST00000088716 Chmp4bQ9D8B3 224 aaKnown RBP27.96■■■□□ 2.07
Smarcc1-201ENSMUST00000088716 Plcb2A3KGF7 1181 aa27.92■■■□□ 2.06
Smarcc1-201ENSMUST00000088716 NudcO35685 332 aaKnown RBP27.92■■■□□ 2.06
Smarcc1-201ENSMUST00000088716 Zfp777B9EKF4 885 aa27.91■■■□□ 2.06
Smarcc1-201ENSMUST00000088716 MyclP10166 368 aa27.91■■■□□ 2.06
Smarcc1-201ENSMUST00000088716 Htatsf1Q8BGC0 757 aa27.91■■■□□ 2.06
Smarcc1-201ENSMUST00000088716 Map7O88735 730 aa27.87■■■□□ 2.05
Smarcc1-201ENSMUST00000088716 Fam71e1A1L3C1 212 aa27.87■■■□□ 2.05
Smarcc1-201ENSMUST00000088716 Cnga1P29974 684 aa27.85■■■□□ 2.05
Smarcc1-201ENSMUST00000088716 Ppm1gQ61074 542 aa27.85■■■□□ 2.05
Smarcc1-201ENSMUST00000088716 Rtn4Q99P72 1162 aaKnown RBP27.85■■■□□ 2.05
Smarcc1-201ENSMUST00000088716 1700019A02RikA0A087WPV9 146 aa27.82■■■□□ 2.04
Smarcc1-201ENSMUST00000088716 Dbr1Q923B1 550 aa27.81■■■□□ 2.04
Smarcc1-201ENSMUST00000088716 Armcx1Q9CX83 456 aa27.8■■■□□ 2.04
Smarcc1-201ENSMUST00000088716 Kif27Q7M6Z4 1394 aa27.79■■■□□ 2.04
Smarcc1-201ENSMUST00000088716 Hspa5P20029 655 aaKnown RBP27.79■■■□□ 2.04
Smarcc1-201ENSMUST00000088716 Kdm5dQ62240 1548 aa27.79■■■□□ 2.04
Smarcc1-201ENSMUST00000088716 1700123L14RikQ3V2K7 440 aa27.76■■■□□ 2.03
Smarcc1-201ENSMUST00000088716 Map4P27546 1125 aaKnown RBP27.76■■■□□ 2.03
Smarcc1-201ENSMUST00000088716 Pes1Q9EQ61 584 aaKnown RBP27.72■■■□□ 2.03
Smarcc1-201ENSMUST00000088716 Ccdc27Q3V036 639 aa27.71■■■□□ 2.03
Smarcc1-201ENSMUST00000088716 Fhad1A6PWD2 1420 aa27.69■■■□□ 2.02
Smarcc1-201ENSMUST00000088716 PnnO35691 725 aaKnown RBP27.69■■■□□ 2.02
Smarcc1-201ENSMUST00000088716 Mbd3Q9Z2D8 285 aaKnown RBP27.69■■■□□ 2.02
Smarcc1-201ENSMUST00000088716 Pkd2O35245 966 aa27.69■■■□□ 2.02
Smarcc1-201ENSMUST00000088716 Hsp90b1P08113 802 aaKnown RBP27.68■■■□□ 2.02
Smarcc1-201ENSMUST00000088716 B4galnt3Q6L8S8 986 aa27.68■■■□□ 2.02
Smarcc1-201ENSMUST00000088716 Wwc2Q6NXJ0 1187 aa27.68■■■□□ 2.02
Smarcc1-201ENSMUST00000088716 Rundc1Q0VDN7 615 aa27.67■■■□□ 2.02
Smarcc1-201ENSMUST00000088716 Rwdd1Q9CQK7 243 aa27.67■■■□□ 2.02
Smarcc1-201ENSMUST00000088716 Ppp1r18Q8BQ30 594 aa27.66■■■□□ 2.02
Smarcc1-201ENSMUST00000088716 KnstrnQ9D9Z1 312 aaKnown RBP27.64■■■□□ 2.02
Smarcc1-201ENSMUST00000088716 Clstn1Q9EPL2 979 aa27.63■■■□□ 2.01
Smarcc1-201ENSMUST00000088716 Pds5bQ4VA53 1446 aaKnown RBP27.62■■■□□ 2.01
Smarcc1-201ENSMUST00000088716 Casc1Q6TDU8 730 aa27.61■■■□□ 2.01
Smarcc1-201ENSMUST00000088716 Cep162Q6ZQ06 1403 aa27.6■■■□□ 2.01
Smarcc1-201ENSMUST00000088716 Aebp1Q640N1 1128 aa27.59■■■□□ 2.01
Smarcc1-201ENSMUST00000088716 Gtf2e1Q9D0D5 440 aa27.59■■■□□ 2.01
Smarcc1-201ENSMUST00000088716 Fmn1Q05860 1466 aa27.58■■■□□ 2.01
Smarcc1-201ENSMUST00000088716 Ifit1bl1D3Z6F0 470 aa27.58■■■□□ 2.01
Smarcc1-201ENSMUST00000088716 HnrnpuQ8VEK3 800 aaKnown RBP27.57■■■□□ 2
Smarcc1-201ENSMUST00000088716 MccE9PWI3 1003 aa27.56■■■□□ 2
Smarcc1-201ENSMUST00000088716 Rtf1A2AQ19 715 aaKnown RBP27.56■■■□□ 2
Smarcc1-201ENSMUST00000088716 AknaQ80VW7 1404 aa27.55■■■□□ 2
Smarcc1-201ENSMUST00000088716 Tmf1B9EKI3 1091 aa27.54■■■□□ 2
Smarcc1-201ENSMUST00000088716 Fyco1Q8VDC1 1437 aa27.54■■■□□ 2
Smarcc1-201ENSMUST00000088716 Rpap1Q80TE0 1409 aa27.53■■■□□ 2
Smarcc1-201ENSMUST00000088716 Speer4f1Q9D5Q6 258 aa27.53■■■□□ 2
Retrieved 100 of 22,080 RNA–protein pairs in 13.9 ms