RNA–Protein interactions for RNA: ENSMUST00000086430.4

Col5a2-201, Transcript of Collagen alpha-2(V) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a2, Length 6,625 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2-201ENSMUST00000086430 Hsp90ab1P11499 724 aaKnown RBP14.12□□□□□ -0.15
Col5a2-201ENSMUST00000086430 P3h3Q8CG70 732 aa14.12□□□□□ -0.15
Col5a2-201ENSMUST00000086430 Clip1Q922J3 1391 aa14.12□□□□□ -0.15
Col5a2-201ENSMUST00000086430 Fgd1P52734 960 aa14.1□□□□□ -0.15
Col5a2-201ENSMUST00000086430 Irx6Q9ER75 438 aa14.09□□□□□ -0.15
Col5a2-201ENSMUST00000086430 PtmaP26350 111 aa14.08□□□□□ -0.16
Col5a2-201ENSMUST00000086430 Trim30dE9PWL0 497 aa14.08□□□□□ -0.16
Col5a2-201ENSMUST00000086430 1700123L14RikQ3V2K7 440 aa14.07□□□□□ -0.16
Col5a2-201ENSMUST00000086430 Apbb1Q9QXJ1 710 aa14.03□□□□□ -0.16
Col5a2-201ENSMUST00000086430 Plcb2A3KGF7 1181 aa14.01□□□□□ -0.17
Col5a2-201ENSMUST00000086430 Spryd3E9Q9B3 442 aa14.01□□□□□ -0.17
Col5a2-201ENSMUST00000086430 Dbr1Q923B1 550 aa13.96□□□□□ -0.18
Col5a2-201ENSMUST00000086430 Aebp2Q9Z248 504 aaKnown RBP13.95□□□□□ -0.18
Col5a2-201ENSMUST00000086430 Hdac5Q9Z2V6 1113 aa13.94□□□□□ -0.18
Col5a2-201ENSMUST00000086430 Armcx1Q9CX83 456 aa13.94□□□□□ -0.18
Col5a2-201ENSMUST00000086430 Ccdc9Q8VC31 543 aaKnown RBP13.93□□□□□ -0.18
Col5a2-201ENSMUST00000086430 Znf316Q6PGE4 1016 aa13.91□□□□□ -0.18
Col5a2-201ENSMUST00000086430 Dcaf1Q80TR8 1506 aa13.91□□□□□ -0.18
Col5a2-201ENSMUST00000086430 Bcl11aQ9QYE3 773 aa13.91□□□□□ -0.18
Col5a2-201ENSMUST00000086430 Ofd1Q80Z25 1017 aa13.91□□□□□ -0.18
Col5a2-201ENSMUST00000086430 Rgl3Q3UYI5 709 aa13.89□□□□□ -0.19
Col5a2-201ENSMUST00000086430 Neurod2Q62414 383 aa13.89□□□□□ -0.19
Col5a2-201ENSMUST00000086430 Ubl4bQ9CQ84 188 aa13.89□□□□□ -0.19
Col5a2-201ENSMUST00000086430 SafbD3YXK2 937 aaKnown RBP13.87□□□□□ -0.19
Col5a2-201ENSMUST00000086430 Clstn1Q9EPL2 979 aa13.87□□□□□ -0.19
Col5a2-201ENSMUST00000086430 Ccer2J3QPU5 274 aa13.87□□□□□ -0.19
Col5a2-201ENSMUST00000086430 Ccdc27Q3V036 639 aa13.87□□□□□ -0.19
Col5a2-201ENSMUST00000086430 B4galnt3Q6L8S8 986 aa13.85□□□□□ -0.19
Col5a2-201ENSMUST00000086430 Safb2Q80YR5 991 aaKnown RBP13.85□□□□□ -0.19
Col5a2-201ENSMUST00000086430 Cep164Q5DU05 1446 aa13.84□□□□□ -0.19
Col5a2-201ENSMUST00000086430 Brd4Q9ESU6 1400 aaKnown RBP13.84□□□□□ -0.19
Col5a2-201ENSMUST00000086430 Abcc8B2RUS7 1588 aa13.84□□□□□ -0.19
Col5a2-201ENSMUST00000086430 BlmO88700 1416 aa13.84□□□□□ -0.19
Col5a2-201ENSMUST00000086430 Rtn4Q99P72 1162 aaKnown RBP13.84□□□□□ -0.19
Col5a2-201ENSMUST00000086430 Slc4a3P16283 1227 aa13.83□□□□□ -0.2
Col5a2-201ENSMUST00000086430 Znf326O88291 580 aa13.83□□□□□ -0.2
Col5a2-201ENSMUST00000086430 Grwd1Q810D6 446 aaKnown RBP13.79□□□□□ -0.2
Col5a2-201ENSMUST00000086430 Htatsf1Q8BGC0 757 aa13.79□□□□□ -0.2
Col5a2-201ENSMUST00000086430 Kdm2aP59997 1161 aa13.78□□□□□ -0.2
Col5a2-201ENSMUST00000086430 Rb1cc1Q9ESK9 1588 aa13.76□□□□□ -0.21
Col5a2-201ENSMUST00000086430 Gm6268A2A3U9 297 aa13.76□□□□□ -0.21
Col5a2-201ENSMUST00000086430 Erich6bQ9D4S6 220 aa13.74□□□□□ -0.21
Col5a2-201ENSMUST00000086430 Ecm2Q5FW85 670 aa13.74□□□□□ -0.21
Col5a2-201ENSMUST00000086430 Tnnt2P50752 301 aa13.72□□□□□ -0.21
Col5a2-201ENSMUST00000086430 Irx3P81067 507 aa13.72□□□□□ -0.21
Col5a2-201ENSMUST00000086430 Dnttip2Q8R2M2 758 aaKnown RBP13.72□□□□□ -0.21
Col5a2-201ENSMUST00000086430 PnnO35691 725 aaKnown RBP13.71□□□□□ -0.21
Col5a2-201ENSMUST00000086430 Casc1Q6TDU8 730 aa13.71□□□□□ -0.21
Col5a2-201ENSMUST00000086430 1700019A02RikA0A087WPV9 146 aa13.71□□□□□ -0.21
Col5a2-201ENSMUST00000086430 Taok2Q6ZQ29 1240 aa13.7□□□□□ -0.22
Col5a2-201ENSMUST00000086430 Ppm1gQ61074 542 aa13.69□□□□□ -0.22
Col5a2-201ENSMUST00000086430 NgefQ8CHT1 710 aa13.69□□□□□ -0.22
Col5a2-201ENSMUST00000086430 Pes1Q9EQ61 584 aaKnown RBP13.67□□□□□ -0.22
Col5a2-201ENSMUST00000086430 Card11Q8CIS0 1159 aa13.66□□□□□ -0.22
Col5a2-201ENSMUST00000086430 Pcmtd1P59913 357 aa13.66□□□□□ -0.22
Col5a2-201ENSMUST00000086430 Clstn2Q9ER65 966 aa13.65□□□□□ -0.22
Col5a2-201ENSMUST00000086430 Hsp90b1P08113 802 aaKnown RBP13.65□□□□□ -0.22
Col5a2-201ENSMUST00000086430 Mapk8ip3Q9ESN9 1337 aa13.65□□□□□ -0.22
Col5a2-201ENSMUST00000086430 Exosc9Q9JHI7 438 aaKnown RBP13.64□□□□□ -0.23
Col5a2-201ENSMUST00000086430 Cnga1P29974 684 aa13.63□□□□□ -0.23
Col5a2-201ENSMUST00000086430 IqubQ8CDK3 788 aa13.63□□□□□ -0.23
Col5a2-201ENSMUST00000086430 Setd5Q5XJV7 1441 aa13.62□□□□□ -0.23
Col5a2-201ENSMUST00000086430 Srpk2O54781 681 aaKnown RBP13.61□□□□□ -0.23
Col5a2-201ENSMUST00000086430 Map7O88735 730 aa13.61□□□□□ -0.23
Col5a2-201ENSMUST00000086430 Adam1bQ8R534 806 aa13.61□□□□□ -0.23
Col5a2-201ENSMUST00000086430 Gm20521D3Z5F7 333 aa13.6□□□□□ -0.23
Col5a2-201ENSMUST00000086430 Sh3bp5Q9Z131 463 aa13.59□□□□□ -0.23
Col5a2-201ENSMUST00000086430 Arhgap27A2AB59 869 aa13.59□□□□□ -0.23
Col5a2-201ENSMUST00000086430 Mak16Q8BGS0 296 aaKnown RBP13.58□□□□□ -0.23
Col5a2-201ENSMUST00000086430 MyclP10166 368 aa13.57□□□□□ -0.24
Col5a2-201ENSMUST00000086430 Mroh3A0A1D5RM54 893 aa13.57□□□□□ -0.24
Col5a2-201ENSMUST00000086430 Supt16hQ920B9 1047 aa13.57□□□□□ -0.24
Col5a2-201ENSMUST00000086430 AU015836B2RUM3 263 aa13.57□□□□□ -0.24
Col5a2-201ENSMUST00000086430 Wwc2Q6NXJ0 1187 aa13.56□□□□□ -0.24
Col5a2-201ENSMUST00000086430 Stk24Q99KH8 431 aa13.55□□□□□ -0.24
Col5a2-201ENSMUST00000086430 Stag3O70576 1240 aa13.54□□□□□ -0.24
Col5a2-201ENSMUST00000086430 MsnP26041 577 aaKnown RBP13.53□□□□□ -0.24
Col5a2-201ENSMUST00000086430 Plin1Q8CGN5 517 aa13.53□□□□□ -0.24
Col5a2-201ENSMUST00000086430 Anapc15P60007 132 aa13.52□□□□□ -0.24
Col5a2-201ENSMUST00000086430 Rassf8Q8CJ96 419 aa13.51□□□□□ -0.25
Col5a2-201ENSMUST00000086430 Senp3Q9EP97 568 aaKnown RBP13.51□□□□□ -0.25
Col5a2-201ENSMUST00000086430 Gpatch11Q3UFS4 262 aa13.5□□□□□ -0.25
Col5a2-201ENSMUST00000086430 MccE9PWI3 1003 aa13.49□□□□□ -0.25
Col5a2-201ENSMUST00000086430 KnstrnQ9D9Z1 312 aaKnown RBP13.49□□□□□ -0.25
Col5a2-201ENSMUST00000086430 Rwdd1Q9CQK7 243 aa13.48□□□□□ -0.25
Col5a2-201ENSMUST00000086430 CgnP59242 1191 aa13.48□□□□□ -0.25
Col5a2-201ENSMUST00000086430 U2surpQ6NV83 1029 aaKnown RBP13.48□□□□□ -0.25
Col5a2-201ENSMUST00000086430 Dnai1Q8C0M8 701 aa13.48□□□□□ -0.25
Col5a2-201ENSMUST00000086430 Mical1Q8VDP3 1048 aa13.47□□□□□ -0.25
Col5a2-201ENSMUST00000086430 Kiaa0754Q69ZZ9 979 aa13.46□□□□□ -0.25
Col5a2-201ENSMUST00000086430 Mfap1aC0HKD8 439 aaKnown RBP13.46□□□□□ -0.26
Col5a2-201ENSMUST00000086430 Mfap1bC0HKD9 439 aaKnown RBP13.46□□□□□ -0.26
Col5a2-201ENSMUST00000086430 Cluap1Q8R3P7 413 aa13.46□□□□□ -0.26
Col5a2-201ENSMUST00000086430 Rrp7aQ9D1C9 280 aaKnown RBP13.46□□□□□ -0.26
Col5a2-201ENSMUST00000086430 Cwc22Q8C5N3 908 aaKnown RBP13.45□□□□□ -0.26
Col5a2-201ENSMUST00000086430 Znf330Q922H9 316 aa13.45□□□□□ -0.26
Col5a2-201ENSMUST00000086430 NudcO35685 332 aaKnown RBP13.44□□□□□ -0.26
Col5a2-201ENSMUST00000086430 Ipo9Q91YE6 1041 aa13.44□□□□□ -0.26
Col5a2-201ENSMUST00000086430 Speer4f1Q9D5Q6 258 aa13.44□□□□□ -0.26
Col5a2-201ENSMUST00000086430 Tcerg1Q8CGF7 1100 aaKnown RBP13.43□□□□□ -0.26
Retrieved 100 of 22,080 RNA–protein pairs in 55.8 ms