RNA–Protein interactions for RNA: ENSMUST00000086430.4

Col5a2-201, Transcript of Collagen alpha-2(V) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a2, Length 6,625 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2-201ENSMUST00000086430 Rhox8Q6VSS7 320 aa18.59■□□□□ 0.57
Col5a2-201ENSMUST00000086430 Ehmt2Q9Z148 1263 aaKnown RBP17.44■□□□□ 0.38
Col5a2-201ENSMUST00000086430 Rpgrip1Q9EPQ2 1331 aa17.12■□□□□ 0.33
Col5a2-201ENSMUST00000086430 Wdr66E9Q743 1299 aa16.9■□□□□ 0.3
Col5a2-201ENSMUST00000086430 Cngb1E1AZ71 1325 aa16.88■□□□□ 0.29
Col5a2-201ENSMUST00000086430 Las1lA2BE28 776 aaKnown RBP16.88■□□□□ 0.29
Col5a2-201ENSMUST00000086430 Zeb1Q64318 1117 aa16.71■□□□□ 0.27
Col5a2-201ENSMUST00000086430 Pelp1Q9DBD5 1123 aaKnown RBP16.61■□□□□ 0.25
Col5a2-201ENSMUST00000086430 Ube2uB1AUC4 352 aa16.54■□□□□ 0.24
Col5a2-201ENSMUST00000086430 Amer1Q7TS75 1132 aa16.5■□□□□ 0.23
Col5a2-201ENSMUST00000086430 Ccdc136Q3TVA9 1136 aa16.43■□□□□ 0.22
Col5a2-201ENSMUST00000086430 Gab3Q8BSM5 595 aa16.36■□□□□ 0.21
Col5a2-201ENSMUST00000086430 Esf1Q3V1V3 845 aaKnown RBP16.29■□□□□ 0.2
Col5a2-201ENSMUST00000086430 CenpbP27790 599 aa16.13■□□□□ 0.17
Col5a2-201ENSMUST00000086430 Npm2Q80W85 207 aa16.09■□□□□ 0.17
Col5a2-201ENSMUST00000086430 Myt1lP97500 1187 aa16.09■□□□□ 0.17
Col5a2-201ENSMUST00000086430 Slc24a1Q91WD8 1130 aa16.07■□□□□ 0.16
Col5a2-201ENSMUST00000086430 Ttbk1Q6PCN3 1308 aa16.04■□□□□ 0.16
Col5a2-201ENSMUST00000086430 Trim41Q5NCC3 630 aa15.87■□□□□ 0.13
Col5a2-201ENSMUST00000086430 UbtfP25976 765 aaKnown RBP15.85■□□□□ 0.13
Col5a2-201ENSMUST00000086430 Acin1Q9JIX8 1338 aaKnown RBP15.82■□□□□ 0.12
Col5a2-201ENSMUST00000086430 4933416C03RikQ3V063 378 aa15.69■□□□□ 0.1
Col5a2-201ENSMUST00000086430 Stra8P70278 393 aa15.64■□□□□ 0.09
Col5a2-201ENSMUST00000086430 4930567H17RikQ3V0K5 233 aa15.64■□□□□ 0.09
Col5a2-201ENSMUST00000086430 Ppargc1bQ8VHJ7 1014 aa15.62■□□□□ 0.09
Col5a2-201ENSMUST00000086430 NefmP08553 848 aa15.61■□□□□ 0.09
Col5a2-201ENSMUST00000086430 Cdk11bP24788 784 aaKnown RBP15.56■□□□□ 0.08
Col5a2-201ENSMUST00000086430 Eif5bQ05D44 1216 aaKnown RBP15.54■□□□□ 0.08
Col5a2-201ENSMUST00000086430 Pcgf6Q99NA9 353 aa15.5■□□□□ 0.07
Col5a2-201ENSMUST00000086430 NischQ80TM9 1593 aa15.48■□□□□ 0.07
Col5a2-201ENSMUST00000086430 Neurod1Q60867 357 aa15.44■□□□□ 0.06
Col5a2-201ENSMUST00000086430 Nop58Q6DFW4 536 aaKnown RBP15.36■□□□□ 0.05
Col5a2-201ENSMUST00000086430 NrdcQ8BHG1 1161 aa15.34■□□□□ 0.05
Col5a2-201ENSMUST00000086430 Ap3b1Q9Z1T1 1105 aa15.34■□□□□ 0.05
Col5a2-201ENSMUST00000086430 Il27Q8K3I6 234 aa15.34■□□□□ 0.05
Col5a2-201ENSMUST00000086430 NeflP08551 543 aa15.3■□□□□ 0.04
Col5a2-201ENSMUST00000086430 HrcG5E8J6 738 aa15.28■□□□□ 0.04
Col5a2-201ENSMUST00000086430 Supt5hO55201 1082 aaKnown RBP15.28■□□□□ 0.04
Col5a2-201ENSMUST00000086430 NclP09405 707 aaKnown RBP15.28■□□□□ 0.04
Col5a2-201ENSMUST00000086430 Fam50aQ9WV03 339 aaKnown RBP15.27■□□□□ 0.03
Col5a2-201ENSMUST00000086430 Myt1Q8CFC2 1127 aa15.25■□□□□ 0.03
Col5a2-201ENSMUST00000086430 Tnnt3Q9QZ47 272 aa15.24■□□□□ 0.03
Col5a2-201ENSMUST00000086430 Os9Q8K2C7 672 aa15.19■□□□□ 0.02
Col5a2-201ENSMUST00000086430 Anp32bQ9EST5 272 aaKnown RBP15.14■□□□□ 0.01
Col5a2-201ENSMUST00000086430 Ccdc180J3QNE4 1664 aa15.11■□□□□ 0.01
Col5a2-201ENSMUST00000086430 Gm38655A0A286YDK6 273 aa15.05■□□□□ -0
Col5a2-201ENSMUST00000086430 Gm35339A0A140LHH9 1649 aa15.04■□□□□ -0
Col5a2-201ENSMUST00000086430 DiexfQ8BTT6 772 aaKnown RBP15.03■□□□□ -0
Col5a2-201ENSMUST00000086430 TonslQ6NZL6 1363 aa15.02■□□□□ -0
Col5a2-201ENSMUST00000086430 DaxxO35613 739 aa14.99□□□□□ -0.01
Col5a2-201ENSMUST00000086430 Zbtb7cQ8VCZ7 619 aa14.95□□□□□ -0.02
Col5a2-201ENSMUST00000086430 ArxO35085 564 aa14.93□□□□□ -0.02
Col5a2-201ENSMUST00000086430 Rtl5Q5DTT4 599 aa14.91□□□□□ -0.02
Col5a2-201ENSMUST00000086430 Chic1Q8CBW7 227 aa14.91□□□□□ -0.02
Col5a2-201ENSMUST00000086430 Rtl1Q7M732 1744 aa14.9□□□□□ -0.02
Col5a2-201ENSMUST00000086430 Mier1Q5UAK0 511 aa14.89□□□□□ -0.03
Col5a2-201ENSMUST00000086430 Mapk8ip2Q9ERE9 830 aa14.89□□□□□ -0.03
Col5a2-201ENSMUST00000086430 Zbtb4Q5F293 982 aa14.88□□□□□ -0.03
Col5a2-201ENSMUST00000086430 Abcc9P70170 1546 aa14.87□□□□□ -0.03
Col5a2-201ENSMUST00000086430 Anp32aO35381 247 aa14.81□□□□□ -0.04
Col5a2-201ENSMUST00000086430 Zcchc6Q5BLK4 1491 aaKnown RBP14.8□□□□□ -0.04
Col5a2-201ENSMUST00000086430 Ifnlr1Q8CGK5 535 aa14.79□□□□□ -0.04
Col5a2-201ENSMUST00000086430 Prdm10Q3UTQ7 1184 aa14.78□□□□□ -0.04
Col5a2-201ENSMUST00000086430 Polr3glQ8R0C0 218 aa14.76□□□□□ -0.05
Col5a2-201ENSMUST00000086430 Csrnp3P59055 597 aa14.76□□□□□ -0.05
Col5a2-201ENSMUST00000086430 Lmod2Q3UHZ5 550 aa14.72□□□□□ -0.05
Col5a2-201ENSMUST00000086430 Hnrnpul2Q00PI9 745 aaKnown RBP14.68□□□□□ -0.06
Col5a2-201ENSMUST00000086430 Ythdc1E9Q5K9 736 aaKnown RBP14.68□□□□□ -0.06
Col5a2-201ENSMUST00000086430 Plekhg3Q4VAC9 1341 aa14.67□□□□□ -0.06
Col5a2-201ENSMUST00000086430 ClspnQ80YR7 1315 aa14.66□□□□□ -0.06
Col5a2-201ENSMUST00000086430 Nlrp6Q91WS2 869 aa14.65□□□□□ -0.06
Col5a2-201ENSMUST00000086430 Rangap1P46061 589 aaKnown RBP14.62□□□□□ -0.07
Col5a2-201ENSMUST00000086430 CatipB9EKE5 520 aa14.61□□□□□ -0.07
Col5a2-201ENSMUST00000086430 Erich6D3Z6S9 713 aa14.6□□□□□ -0.07
Col5a2-201ENSMUST00000086430 Lmod3E9QA62 571 aa14.59□□□□□ -0.07
Col5a2-201ENSMUST00000086430 Plppr3Q7TPB0 716 aa14.58□□□□□ -0.08
Col5a2-201ENSMUST00000086430 Atp1b4Q99ME6 356 aa14.57□□□□□ -0.08
Col5a2-201ENSMUST00000086430 Gm13697A2AK42 830 aa14.56□□□□□ -0.08
Col5a2-201ENSMUST00000086430 Eid3Q3V124 375 aa14.55□□□□□ -0.08
Col5a2-201ENSMUST00000086430 Ppp4r2Q0VGB7 417 aa14.51□□□□□ -0.09
Col5a2-201ENSMUST00000086430 Sall2Q9QX96 1004 aa14.5□□□□□ -0.09
Col5a2-201ENSMUST00000086430 Vsig10D3YX43 558 aa14.49□□□□□ -0.09
Col5a2-201ENSMUST00000086430 Upf2A2AT37 1269 aaKnown RBP14.43□□□□□ -0.1
Col5a2-201ENSMUST00000086430 Fkbp15Q6P9Q6 1216 aaKnown RBP14.41□□□□□ -0.1
Col5a2-201ENSMUST00000086430 Rad21Q61550 635 aaKnown RBP14.41□□□□□ -0.1
Col5a2-201ENSMUST00000086430 Calr4Q3TQS0 420 aa14.41□□□□□ -0.1
Col5a2-201ENSMUST00000086430 Anks4bQ8K3X6 423 aa14.41□□□□□ -0.1
Col5a2-201ENSMUST00000086430 DekQ7TNV0 380 aaKnown RBP14.38□□□□□ -0.11
Col5a2-201ENSMUST00000086430 Aplp2Q06335 707 aa14.33□□□□□ -0.12
Col5a2-201ENSMUST00000086430 Gm13695A2AK44 830 aa14.32□□□□□ -0.12
Col5a2-201ENSMUST00000086430 Npm1Q61937 292 aaKnown RBP14.32□□□□□ -0.12
Col5a2-201ENSMUST00000086430 Hsp90aa1P07901 733 aaKnown RBP14.3□□□□□ -0.12
Col5a2-201ENSMUST00000086430 Arid4bA2CG63 1314 aaKnown RBP14.26□□□□□ -0.13
Col5a2-201ENSMUST00000086430 Wdr43Q6ZQL4 677 aaKnown RBP14.24□□□□□ -0.13
Col5a2-201ENSMUST00000086430 Trim26Q99PN3 545 aa14.24□□□□□ -0.13
Col5a2-201ENSMUST00000086430 Fam71e1A1L3C1 212 aa14.18□□□□□ -0.14
Col5a2-201ENSMUST00000086430 Trim44Q9QXA7 346 aa14.16□□□□□ -0.14
Col5a2-201ENSMUST00000086430 Mrs2Q5NCE8 434 aa14.15□□□□□ -0.14
Col5a2-201ENSMUST00000086430 Chic2Q9D9G3 165 aa14.14□□□□□ -0.15
Col5a2-201ENSMUST00000086430 CanxP35564 591 aaKnown RBP14.13□□□□□ -0.15
Retrieved 100 of 22,080 RNA–protein pairs in 122.1 ms