RNA–Protein interactions for RNA: ENSMUST00000065005.4

Atg4d-201, Transcript of Cysteine protease ATG4D, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Atg4d, Length 5,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4d-201ENSMUST00000065005 Vsig10D3YX43 558 aa20.25■□□□□ 0.83
Atg4d-201ENSMUST00000065005 DekQ7TNV0 380 aaKnown RBP20.25■□□□□ 0.83
Atg4d-201ENSMUST00000065005 Abcc8B2RUS7 1588 aa20.23■□□□□ 0.83
Atg4d-201ENSMUST00000065005 Ythdc1E9Q5K9 736 aaKnown RBP20.2■□□□□ 0.82
Atg4d-201ENSMUST00000065005 Cep164Q5DU05 1446 aa20.2■□□□□ 0.82
Atg4d-201ENSMUST00000065005 Rgl3Q3UYI5 709 aa20.17■□□□□ 0.82
Atg4d-201ENSMUST00000065005 Anks4bQ8K3X6 423 aa20.1■□□□□ 0.81
Atg4d-201ENSMUST00000065005 Lmod3E9QA62 571 aa20.1■□□□□ 0.81
Atg4d-201ENSMUST00000065005 IqubQ8CDK3 788 aa20.1■□□□□ 0.81
Atg4d-201ENSMUST00000065005 Znf326O88291 580 aa20.1■□□□□ 0.81
Atg4d-201ENSMUST00000065005 Wdr43Q6ZQL4 677 aaKnown RBP20.09■□□□□ 0.81
Atg4d-201ENSMUST00000065005 Kdm2aP59997 1161 aa20.08■□□□□ 0.81
Atg4d-201ENSMUST00000065005 Setd5Q5XJV7 1441 aa20.05■□□□□ 0.8
Atg4d-201ENSMUST00000065005 Rb1cc1Q9ESK9 1588 aa20.02■□□□□ 0.8
Atg4d-201ENSMUST00000065005 Srpk2O54781 681 aaKnown RBP20.02■□□□□ 0.79
Atg4d-201ENSMUST00000065005 Hsp90ab1P11499 724 aaKnown RBP20■□□□□ 0.79
Atg4d-201ENSMUST00000065005 MyclP10166 368 aa20■□□□□ 0.79
Atg4d-201ENSMUST00000065005 Arhgap27A2AB59 869 aa19.99■□□□□ 0.79
Atg4d-201ENSMUST00000065005 Exosc9Q9JHI7 438 aaKnown RBP19.99■□□□□ 0.79
Atg4d-201ENSMUST00000065005 NgefQ8CHT1 710 aa19.99■□□□□ 0.79
Atg4d-201ENSMUST00000065005 Arid4bA2CG63 1314 aaKnown RBP19.99■□□□□ 0.79
Atg4d-201ENSMUST00000065005 Grwd1Q810D6 446 aaKnown RBP19.98■□□□□ 0.79
Atg4d-201ENSMUST00000065005 Rtn4Q99P72 1162 aaKnown RBP19.98■□□□□ 0.79
Atg4d-201ENSMUST00000065005 Trim30dE9PWL0 497 aa19.98■□□□□ 0.79
Atg4d-201ENSMUST00000065005 Dcaf1Q80TR8 1506 aa19.96■□□□□ 0.79
Atg4d-201ENSMUST00000065005 Gm20521D3Z5F7 333 aa19.94■□□□□ 0.78
Atg4d-201ENSMUST00000065005 Mroh3A0A1D5RM54 893 aa19.94■□□□□ 0.78
Atg4d-201ENSMUST00000065005 Apbb1Q9QXJ1 710 aa19.92■□□□□ 0.78
Atg4d-201ENSMUST00000065005 Aplp2Q06335 707 aa19.92■□□□□ 0.78
Atg4d-201ENSMUST00000065005 CanxP35564 591 aaKnown RBP19.9■□□□□ 0.78
Atg4d-201ENSMUST00000065005 Trim44Q9QXA7 346 aa19.9■□□□□ 0.78
Atg4d-201ENSMUST00000065005 Kif15Q6P9L6 1387 aa19.9■□□□□ 0.78
Atg4d-201ENSMUST00000065005 Ofd1Q80Z25 1017 aa19.88■□□□□ 0.77
Atg4d-201ENSMUST00000065005 Mapk8ip3Q9ESN9 1337 aa19.88■□□□□ 0.77
Atg4d-201ENSMUST00000065005 Neurod2Q62414 383 aa19.88■□□□□ 0.77
Atg4d-201ENSMUST00000065005 Clstn1Q9EPL2 979 aa19.88■□□□□ 0.77
Atg4d-201ENSMUST00000065005 Stk24Q99KH8 431 aa19.87■□□□□ 0.77
Atg4d-201ENSMUST00000065005 Card11Q8CIS0 1159 aa19.86■□□□□ 0.77
Atg4d-201ENSMUST00000065005 PtmaP26350 111 aa19.86■□□□□ 0.77
Atg4d-201ENSMUST00000065005 Rrp7aQ9D1C9 280 aaKnown RBP19.86■□□□□ 0.77
Atg4d-201ENSMUST00000065005 Stag3O70576 1240 aa19.84■□□□□ 0.77
Atg4d-201ENSMUST00000065005 Rsf1E9PWW9 1441 aaKnown RBP19.82■□□□□ 0.76
Atg4d-201ENSMUST00000065005 Gm6268A2A3U9 297 aa19.82■□□□□ 0.76
Atg4d-201ENSMUST00000065005 1700019A02RikA0A087WPV9 146 aa19.78■□□□□ 0.76
Atg4d-201ENSMUST00000065005 Ercc6F8VPZ5 1481 aa19.76■□□□□ 0.75
Atg4d-201ENSMUST00000065005 Plcb2A3KGF7 1181 aa19.76■□□□□ 0.75
Atg4d-201ENSMUST00000065005 Ccdc18Q640L5 1455 aa19.74■□□□□ 0.75
Atg4d-201ENSMUST00000065005 Iqcf3Q9D498 203 aa19.73■□□□□ 0.75
Atg4d-201ENSMUST00000065005 PnnO35691 725 aaKnown RBP19.72■□□□□ 0.75
Atg4d-201ENSMUST00000065005 Cnga1P29974 684 aa19.72■□□□□ 0.75
Atg4d-201ENSMUST00000065005 Pes1Q9EQ61 584 aaKnown RBP19.72■□□□□ 0.75
Atg4d-201ENSMUST00000065005 Armcx1Q9CX83 456 aa19.72■□□□□ 0.75
Atg4d-201ENSMUST00000065005 Mtus2Q3UHD3 1353 aa19.71■□□□□ 0.75
Atg4d-201ENSMUST00000065005 Cwc22Q8C5N3 908 aaKnown RBP19.68■□□□□ 0.74
Atg4d-201ENSMUST00000065005 Eea1Q8BL66 1411 aa19.66■□□□□ 0.74
Atg4d-201ENSMUST00000065005 Ppp1r18Q8BQ30 594 aa19.66■□□□□ 0.74
Atg4d-201ENSMUST00000065005 Dbr1Q923B1 550 aa19.66■□□□□ 0.74
Atg4d-201ENSMUST00000065005 NudcO35685 332 aaKnown RBP19.64■□□□□ 0.73
Atg4d-201ENSMUST00000065005 Chmp4bQ9D8B3 224 aaKnown RBP19.63■□□□□ 0.73
Atg4d-201ENSMUST00000065005 Aebp2Q9Z248 504 aaKnown RBP19.63■□□□□ 0.73
Atg4d-201ENSMUST00000065005 Hsp90b1P08113 802 aaKnown RBP19.61■□□□□ 0.73
Atg4d-201ENSMUST00000065005 Map7O88735 730 aa19.6■□□□□ 0.73
Atg4d-201ENSMUST00000065005 Zfp777B9EKF4 885 aa19.59■□□□□ 0.73
Atg4d-201ENSMUST00000065005 Ggt6Q6PDE7 497 aa19.59■□□□□ 0.73
Atg4d-201ENSMUST00000065005 Sh3bp5Q9Z131 463 aa19.58■□□□□ 0.73
Atg4d-201ENSMUST00000065005 Htatsf1Q8BGC0 757 aa19.58■□□□□ 0.73
Atg4d-201ENSMUST00000065005 NacadQ5SWP3 1504 aa19.57■□□□□ 0.72
Atg4d-201ENSMUST00000065005 Ccdc9Q8VC31 543 aaKnown RBP19.57■□□□□ 0.72
Atg4d-201ENSMUST00000065005 Golga3P55937 1487 aa19.57■□□□□ 0.72
Atg4d-201ENSMUST00000065005 Casc1Q6TDU8 730 aa19.54■□□□□ 0.72
Atg4d-201ENSMUST00000065005 B4galnt3Q6L8S8 986 aa19.52■□□□□ 0.71
Atg4d-201ENSMUST00000065005 Plin1Q8CGN5 517 aa19.5■□□□□ 0.71
Atg4d-201ENSMUST00000065005 Ecm2Q5FW85 670 aa19.5■□□□□ 0.71
Atg4d-201ENSMUST00000065005 Ppm1gQ61074 542 aa19.5■□□□□ 0.71
Atg4d-201ENSMUST00000065005 Rtf1A2AQ19 715 aaKnown RBP19.49■□□□□ 0.71
Atg4d-201ENSMUST00000065005 Q8BT18 775 aa19.49■□□□□ 0.71
Atg4d-201ENSMUST00000065005 Eif4g2Q62448 906 aaKnown RBP19.48■□□□□ 0.71
Atg4d-201ENSMUST00000065005 Stk26Q99JT2 416 aa19.48■□□□□ 0.71
Atg4d-201ENSMUST00000065005 U2surpQ6NV83 1029 aaKnown RBP19.47■□□□□ 0.71
Atg4d-201ENSMUST00000065005 Fam71e1A1L3C1 212 aa19.47■□□□□ 0.71
Atg4d-201ENSMUST00000065005 Spryd3E9Q9B3 442 aa19.47■□□□□ 0.71
Atg4d-201ENSMUST00000065005 Rassf8Q8CJ96 419 aa19.46■□□□□ 0.71
Atg4d-201ENSMUST00000065005 MccE9PWI3 1003 aa19.45■□□□□ 0.7
Atg4d-201ENSMUST00000065005 KnstrnQ9D9Z1 312 aaKnown RBP19.43■□□□□ 0.7
Atg4d-201ENSMUST00000065005 Arid3cA6PWV5 409 aa19.43■□□□□ 0.7
Atg4d-201ENSMUST00000065005 Anapc15P60007 132 aa19.43■□□□□ 0.7
Atg4d-201ENSMUST00000065005 Mia2Q91ZV0 1396 aa19.42■□□□□ 0.7
Atg4d-201ENSMUST00000065005 Map4P27546 1125 aaKnown RBP19.41■□□□□ 0.7
Atg4d-201ENSMUST00000065005 HnrnpuQ8VEK3 800 aaKnown RBP19.39■□□□□ 0.69
Atg4d-201ENSMUST00000065005 Rwdd1Q9CQK7 243 aa19.39■□□□□ 0.69
Atg4d-201ENSMUST00000065005 Tnnt1O88346 262 aa19.38■□□□□ 0.69
Atg4d-201ENSMUST00000065005 Psme1P97371 249 aa19.38■□□□□ 0.69
Atg4d-201ENSMUST00000065005 Sox12Q04890 314 aa19.37■□□□□ 0.69
Atg4d-201ENSMUST00000065005 Fhad1A6PWD2 1420 aa19.37■□□□□ 0.69
Atg4d-201ENSMUST00000065005 Wwc2Q6NXJ0 1187 aa19.36■□□□□ 0.69
Atg4d-201ENSMUST00000065005 Gtf2e1Q9D0D5 440 aa19.36■□□□□ 0.69
Atg4d-201ENSMUST00000065005 Ifit1bl1D3Z6F0 470 aa19.36■□□□□ 0.69
Atg4d-201ENSMUST00000065005 Hspa5P20029 655 aaKnown RBP19.36■□□□□ 0.69
Atg4d-201ENSMUST00000065005 Rundc1Q0VDN7 615 aa19.36■□□□□ 0.69
Atg4d-201ENSMUST00000065005 AknaQ80VW7 1404 aa19.36■□□□□ 0.69
Retrieved 100 of 22,080 RNA–protein pairs in 63.5 ms