RNA–Protein interactions for RNA: ENSMUST00000059462.11

Chmp3-201, Transcript of Charged multivesicular body protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Chmp3, Length 2,654 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp3-201ENSMUST00000059462 Ncbp3Q8BZR9 615 aaKnown RBP16.58■□□□□ 0.24
Chmp3-201ENSMUST00000059462 NclP09405 707 aaKnown RBP16.57■□□□□ 0.24
Chmp3-201ENSMUST00000059462 Slc24a1Q91WD8 1130 aa16.56■□□□□ 0.24
Chmp3-201ENSMUST00000059462 Kdm5bQ80Y84 1544 aa16.56■□□□□ 0.24
Chmp3-201ENSMUST00000059462 Top2aQ01320 1528 aaKnown RBP16.55■□□□□ 0.24
Chmp3-201ENSMUST00000059462 Fgd1P52734 960 aa16.54■□□□□ 0.24
Chmp3-201ENSMUST00000059462 Eif5bQ05D44 1216 aaKnown RBP16.54■□□□□ 0.24
Chmp3-201ENSMUST00000059462 NrdcQ8BHG1 1161 aa16.53■□□□□ 0.24
Chmp3-201ENSMUST00000059462 Wdr43Q6ZQL4 677 aaKnown RBP16.52■□□□□ 0.24
Chmp3-201ENSMUST00000059462 Pak3Q61036 559 aa16.49■□□□□ 0.23
Chmp3-201ENSMUST00000059462 Slc4a1apE9PX68 744 aa16.47■□□□□ 0.23
Chmp3-201ENSMUST00000059462 Fmn1Q05860 1466 aa16.46■□□□□ 0.23
Chmp3-201ENSMUST00000059462 Upf2A2AT37 1269 aaKnown RBP16.46■□□□□ 0.23
Chmp3-201ENSMUST00000059462 Washc2Q6PGL7 1334 aa16.45■□□□□ 0.22
Chmp3-201ENSMUST00000059462 Il27Q8K3I6 234 aa16.43■□□□□ 0.22
Chmp3-201ENSMUST00000059462 BicraF8VPZ9 1578 aa16.42■□□□□ 0.22
Chmp3-201ENSMUST00000059462 Q8BT18 775 aa16.42■□□□□ 0.22
Chmp3-201ENSMUST00000059462 Baz1bQ9Z277 1479 aa16.41■□□□□ 0.22
Chmp3-201ENSMUST00000059462 Cttnbp2B9EJA2 1648 aa16.4■□□□□ 0.22
Chmp3-201ENSMUST00000059462 Ccdc27Q3V036 639 aa16.4■□□□□ 0.22
Chmp3-201ENSMUST00000059462 Eif4g1Q6NZJ6 1600 aaKnown RBP16.38■□□□□ 0.21
Chmp3-201ENSMUST00000059462 Liat1Q810M6 228 aa16.38■□□□□ 0.21
Chmp3-201ENSMUST00000059462 Znf316Q6PGE4 1016 aa16.37■□□□□ 0.21
Chmp3-201ENSMUST00000059462 Arap1Q4LDD4 1452 aa16.36■□□□□ 0.21
Chmp3-201ENSMUST00000059462 Gtf3c3Q3TMP1 882 aa16.36■□□□□ 0.21
Chmp3-201ENSMUST00000059462 Gm13697A2AK42 830 aa16.36■□□□□ 0.21
Chmp3-201ENSMUST00000059462 Smg6P61406 1418 aaKnown RBP16.33■□□□□ 0.21
Chmp3-201ENSMUST00000059462 Egfem1Q8C088 590 aa16.33■□□□□ 0.2
Chmp3-201ENSMUST00000059462 4930567H17RikQ3V0K5 233 aa16.32■□□□□ 0.2
Chmp3-201ENSMUST00000059462 Fam50aQ9WV03 339 aaKnown RBP16.32■□□□□ 0.2
Chmp3-201ENSMUST00000059462 Eea1Q8BL66 1411 aa16.31■□□□□ 0.2
Chmp3-201ENSMUST00000059462 Hspa5P20029 655 aaKnown RBP16.31■□□□□ 0.2
Chmp3-201ENSMUST00000059462 Sin3aQ60520 1274 aaKnown RBP16.31■□□□□ 0.2
Chmp3-201ENSMUST00000059462 P3h3Q8CG70 732 aa16.31■□□□□ 0.2
Chmp3-201ENSMUST00000059462 Plcd4Q8K3R3 807 aa16.31■□□□□ 0.2
Chmp3-201ENSMUST00000059462 UacaQ8CGB3 1411 aa16.29■□□□□ 0.2
Chmp3-201ENSMUST00000059462 Ccdc18Q640L5 1455 aa16.28■□□□□ 0.2
Chmp3-201ENSMUST00000059462 TchhA0A0B4J1F9 1599 aa16.27■□□□□ 0.19
Chmp3-201ENSMUST00000059462 Slc4a3P16283 1227 aa16.26■□□□□ 0.19
Chmp3-201ENSMUST00000059462 Scaf1Q5U4C3 1256 aaKnown RBP16.26■□□□□ 0.19
Chmp3-201ENSMUST00000059462 Arhgef5E9Q7D5 1581 aa16.26■□□□□ 0.19
Chmp3-201ENSMUST00000059462 Irx3P81067 507 aa16.25■□□□□ 0.19
Chmp3-201ENSMUST00000059462 Arhgap35Q91YM2 1499 aa16.23■□□□□ 0.19
Chmp3-201ENSMUST00000059462 Setd5Q5XJV7 1441 aa16.23■□□□□ 0.19
Chmp3-201ENSMUST00000059462 Hsp90aa1P07901 733 aaKnown RBP16.2■□□□□ 0.18
Chmp3-201ENSMUST00000059462 Ccdc9Q8VC31 543 aaKnown RBP16.2■□□□□ 0.18
Chmp3-201ENSMUST00000059462 Ipo9Q91YE6 1041 aa16.19■□□□□ 0.18
Chmp3-201ENSMUST00000059462 Mrs2Q5NCE8 434 aa16.17■□□□□ 0.18
Chmp3-201ENSMUST00000059462 Ccer2J3QPU5 274 aa16.17■□□□□ 0.18
Chmp3-201ENSMUST00000059462 BlmO88700 1416 aa16.16■□□□□ 0.18
Chmp3-201ENSMUST00000059462 Smarca4Q3TKT4 1613 aaKnown RBP16.16■□□□□ 0.18
Chmp3-201ENSMUST00000059462 Arid3aQ62431 601 aa16.15■□□□□ 0.18
Chmp3-201ENSMUST00000059462 Ube2q2Q8K2Z8 378 aa16.14■□□□□ 0.17
Chmp3-201ENSMUST00000059462 Tiam1Q60610 1591 aa16.14■□□□□ 0.17
Chmp3-201ENSMUST00000059462 Vsig10D3YX43 558 aa16.12■□□□□ 0.17
Chmp3-201ENSMUST00000059462 Ncoa2Q61026 1462 aa16.11■□□□□ 0.17
Chmp3-201ENSMUST00000059462 Slc4a2P13808 1237 aaKnown RBP16.11■□□□□ 0.17
Chmp3-201ENSMUST00000059462 Kcna4Q61423 654 aa16.1■□□□□ 0.17
Chmp3-201ENSMUST00000059462 PtprkP35822 1457 aa16.1■□□□□ 0.17
Chmp3-201ENSMUST00000059462 Ankrd36D3Z4K0 1415 aa16.09■□□□□ 0.17
Chmp3-201ENSMUST00000059462 AqrQ8CFQ3 1481 aaKnown RBP16.09■□□□□ 0.17
Chmp3-201ENSMUST00000059462 4933416C03RikQ3V063 378 aa16.09■□□□□ 0.17
Chmp3-201ENSMUST00000059462 Naip1Q9QWK5 1403 aa16.08■□□□□ 0.17
Chmp3-201ENSMUST00000059462 Wwc2Q6NXJ0 1187 aa16.08■□□□□ 0.16
Chmp3-201ENSMUST00000059462 Dhx29Q6PGC1 1365 aaKnown RBP16.07■□□□□ 0.16
Chmp3-201ENSMUST00000059462 Arhgap27A2AB59 869 aa16.07■□□□□ 0.16
Chmp3-201ENSMUST00000059462 Kcnh8P59111 1102 aa16.07■□□□□ 0.16
Chmp3-201ENSMUST00000059462 Lmod2Q3UHZ5 550 aa16.06■□□□□ 0.16
Chmp3-201ENSMUST00000059462 Iqcf3Q9D498 203 aa16.05■□□□□ 0.16
Chmp3-201ENSMUST00000059462 DaxxO35613 739 aa16.04■□□□□ 0.16
Chmp3-201ENSMUST00000059462 Tcerg1Q8CGF7 1100 aaKnown RBP16.03■□□□□ 0.16
Chmp3-201ENSMUST00000059462 Exoc6Q8R313 802 aa16.02■□□□□ 0.15
Chmp3-201ENSMUST00000059462 Camsap2Q8C1B1 1461 aa16.01■□□□□ 0.15
Chmp3-201ENSMUST00000059462 NrkQ9R0G8 1455 aa16.01■□□□□ 0.15
Chmp3-201ENSMUST00000059462 Znf326O88291 580 aa16.01■□□□□ 0.15
Chmp3-201ENSMUST00000059462 Ipo4Q8VI75 1082 aa16.01■□□□□ 0.15
Chmp3-201ENSMUST00000059462 Slx4Q6P1D7 1565 aa16■□□□□ 0.15
Chmp3-201ENSMUST00000059462 Fhad1A6PWD2 1420 aa16■□□□□ 0.15
Chmp3-201ENSMUST00000059462 3425401B19RikD3Z1D3 1412 aa16■□□□□ 0.15
Chmp3-201ENSMUST00000059462 ChgaP26339 463 aaKnown RBP16■□□□□ 0.15
Chmp3-201ENSMUST00000059462 Naip5Q9R016 1403 aa15.98■□□□□ 0.15
Chmp3-201ENSMUST00000059462 Mia2Q91ZV0 1396 aa15.96■□□□□ 0.15
Chmp3-201ENSMUST00000059462 Gm13695A2AK44 830 aa15.95■□□□□ 0.14
Chmp3-201ENSMUST00000059462 Taok2Q6ZQ29 1240 aa15.93■□□□□ 0.14
Chmp3-201ENSMUST00000059462 Vps8Q0P5W1 1427 aa15.93■□□□□ 0.14
Chmp3-201ENSMUST00000059462 Ofd1Q80Z25 1017 aa15.93■□□□□ 0.14
Chmp3-201ENSMUST00000059462 Pcf11G3X9Z4 1553 aa15.92■□□□□ 0.14
Chmp3-201ENSMUST00000059462 L3mbtl2P59178 703 aa15.91■□□□□ 0.14
Chmp3-201ENSMUST00000059462 Pprc1Q6NZN1 1644 aa15.9■□□□□ 0.14
Chmp3-201ENSMUST00000059462 Fbxo3Q9DC63 480 aa15.9■□□□□ 0.14
Chmp3-201ENSMUST00000059462 PnisrA2AJT4 805 aaKnown RBP15.89■□□□□ 0.13
Chmp3-201ENSMUST00000059462 Fyco1Q8VDC1 1437 aa15.89■□□□□ 0.13
Chmp3-201ENSMUST00000059462 Pds5bQ4VA53 1446 aaKnown RBP15.88■□□□□ 0.13
Chmp3-201ENSMUST00000059462 Ankrd26Q811D2 1581 aa15.88■□□□□ 0.13
Chmp3-201ENSMUST00000059462 Map3k1P53349 1493 aa15.88■□□□□ 0.13
Chmp3-201ENSMUST00000059462 Erich3F6QRE9 1637 aa15.88■□□□□ 0.13
Chmp3-201ENSMUST00000059462 TnnQ80Z71 1560 aa15.87■□□□□ 0.13
Chmp3-201ENSMUST00000059462 Prdm16A2A935 1275 aa15.86■□□□□ 0.13
Chmp3-201ENSMUST00000059462 Ncoa1P70365 1447 aa15.85■□□□□ 0.13
Chmp3-201ENSMUST00000059462 Shroom4Q1W617 1475 aa15.85■□□□□ 0.13
Retrieved 100 of 22,080 RNA–protein pairs in 10.7 ms