RNA–Protein interactions for RNA: ENSMUST00000056907.6

Smcr8-201, Transcript of Guanine nucleotide exchange protein SMCR8, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Smcr8, Length 7,391 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smcr8-201ENSMUST00000056907 Upf2A2AT37 1269 aaKnown RBP12.6□□□□□ -0.39
Smcr8-201ENSMUST00000056907 Hdac5Q9Z2V6 1113 aa12.58□□□□□ -0.4
Smcr8-201ENSMUST00000056907 Ecm2Q5FW85 670 aa12.54□□□□□ -0.4
Smcr8-201ENSMUST00000056907 Sall2Q9QX96 1004 aa12.53□□□□□ -0.4
Smcr8-201ENSMUST00000056907 Kdm2aP59997 1161 aa12.53□□□□□ -0.4
Smcr8-201ENSMUST00000056907 Znf326O88291 580 aa12.52□□□□□ -0.41
Smcr8-201ENSMUST00000056907 Rgl3Q3UYI5 709 aa12.51□□□□□ -0.41
Smcr8-201ENSMUST00000056907 Apbb1Q9QXJ1 710 aa12.5□□□□□ -0.41
Smcr8-201ENSMUST00000056907 Calr4Q3TQS0 420 aa12.49□□□□□ -0.41
Smcr8-201ENSMUST00000056907 BlmO88700 1416 aa12.47□□□□□ -0.41
Smcr8-201ENSMUST00000056907 Mrs2Q5NCE8 434 aa12.47□□□□□ -0.41
Smcr8-201ENSMUST00000056907 Grwd1Q810D6 446 aaKnown RBP12.45□□□□□ -0.42
Smcr8-201ENSMUST00000056907 Arhgap27A2AB59 869 aa12.44□□□□□ -0.42
Smcr8-201ENSMUST00000056907 Neurod2Q62414 383 aa12.42□□□□□ -0.42
Smcr8-201ENSMUST00000056907 Armcx1Q9CX83 456 aa12.41□□□□□ -0.42
Smcr8-201ENSMUST00000056907 Aplp2Q06335 707 aa12.41□□□□□ -0.42
Smcr8-201ENSMUST00000056907 Stk24Q99KH8 431 aa12.41□□□□□ -0.42
Smcr8-201ENSMUST00000056907 1700019A02RikA0A087WPV9 146 aa12.4□□□□□ -0.42
Smcr8-201ENSMUST00000056907 IqubQ8CDK3 788 aa12.39□□□□□ -0.43
Smcr8-201ENSMUST00000056907 Exosc9Q9JHI7 438 aaKnown RBP12.39□□□□□ -0.43
Smcr8-201ENSMUST00000056907 Cnga1P29974 684 aa12.38□□□□□ -0.43
Smcr8-201ENSMUST00000056907 Hsp90ab1P11499 724 aaKnown RBP12.38□□□□□ -0.43
Smcr8-201ENSMUST00000056907 Brd4Q9ESU6 1400 aaKnown RBP12.37□□□□□ -0.43
Smcr8-201ENSMUST00000056907 Trim30dE9PWL0 497 aa12.36□□□□□ -0.43
Smcr8-201ENSMUST00000056907 Srpk2O54781 681 aaKnown RBP12.36□□□□□ -0.43
Smcr8-201ENSMUST00000056907 Gm6268A2A3U9 297 aa12.36□□□□□ -0.43
Smcr8-201ENSMUST00000056907 Q8BT18 775 aa12.35□□□□□ -0.43
Smcr8-201ENSMUST00000056907 Clstn2Q9ER65 966 aa12.35□□□□□ -0.43
Smcr8-201ENSMUST00000056907 Gm20521D3Z5F7 333 aa12.35□□□□□ -0.43
Smcr8-201ENSMUST00000056907 Ggt6Q6PDE7 497 aa12.33□□□□□ -0.44
Smcr8-201ENSMUST00000056907 Dbr1Q923B1 550 aa12.32□□□□□ -0.44
Smcr8-201ENSMUST00000056907 Stag3O70576 1240 aa12.32□□□□□ -0.44
Smcr8-201ENSMUST00000056907 PtmaP26350 111 aa12.32□□□□□ -0.44
Smcr8-201ENSMUST00000056907 Wdr43Q6ZQL4 677 aaKnown RBP12.32□□□□□ -0.44
Smcr8-201ENSMUST00000056907 Plin1Q8CGN5 517 aa12.32□□□□□ -0.44
Smcr8-201ENSMUST00000056907 Ubap1lG3UW59 384 aa12.31□□□□□ -0.44
Smcr8-201ENSMUST00000056907 Rrp7aQ9D1C9 280 aaKnown RBP12.31□□□□□ -0.44
Smcr8-201ENSMUST00000056907 Mroh3A0A1D5RM54 893 aa12.3□□□□□ -0.44
Smcr8-201ENSMUST00000056907 Ppp1r18Q8BQ30 594 aa12.3□□□□□ -0.44
Smcr8-201ENSMUST00000056907 Ccer2J3QPU5 274 aa12.3□□□□□ -0.44
Smcr8-201ENSMUST00000056907 CanxP35564 591 aaKnown RBP12.28□□□□□ -0.44
Smcr8-201ENSMUST00000056907 Senp3Q9EP97 568 aaKnown RBP12.26□□□□□ -0.45
Smcr8-201ENSMUST00000056907 Plcb2A3KGF7 1181 aa12.26□□□□□ -0.45
Smcr8-201ENSMUST00000056907 Trim44Q9QXA7 346 aa12.25□□□□□ -0.45
Smcr8-201ENSMUST00000056907 Setd5Q5XJV7 1441 aa12.25□□□□□ -0.45
Smcr8-201ENSMUST00000056907 Ofd1Q80Z25 1017 aa12.24□□□□□ -0.45
Smcr8-201ENSMUST00000056907 Mapk8ip3Q9ESN9 1337 aa12.24□□□□□ -0.45
Smcr8-201ENSMUST00000056907 Spryd3E9Q9B3 442 aa12.24□□□□□ -0.45
Smcr8-201ENSMUST00000056907 Card11Q8CIS0 1159 aa12.23□□□□□ -0.45
Smcr8-201ENSMUST00000056907 Pes1Q9EQ61 584 aaKnown RBP12.22□□□□□ -0.45
Smcr8-201ENSMUST00000056907 Anks4bQ8K3X6 423 aa12.22□□□□□ -0.45
Smcr8-201ENSMUST00000056907 MlecQ6ZQI3 291 aaKnown RBP12.21□□□□□ -0.46
Smcr8-201ENSMUST00000056907 Rb1cc1Q9ESK9 1588 aa12.21□□□□□ -0.46
Smcr8-201ENSMUST00000056907 Kif15Q6P9L6 1387 aa12.2□□□□□ -0.46
Smcr8-201ENSMUST00000056907 Stk26Q99JT2 416 aa12.2□□□□□ -0.46
Smcr8-201ENSMUST00000056907 Sh3bp5Q9Z131 463 aa12.19□□□□□ -0.46
Smcr8-201ENSMUST00000056907 PnnO35691 725 aaKnown RBP12.19□□□□□ -0.46
Smcr8-201ENSMUST00000056907 Tnnt1O88346 262 aa12.19□□□□□ -0.46
Smcr8-201ENSMUST00000056907 Sox12Q04890 314 aa12.19□□□□□ -0.46
Smcr8-201ENSMUST00000056907 B4galnt3Q6L8S8 986 aa12.19□□□□□ -0.46
Smcr8-201ENSMUST00000056907 Cep164Q5DU05 1446 aa12.17□□□□□ -0.46
Smcr8-201ENSMUST00000056907 Abcc8B2RUS7 1588 aa12.16□□□□□ -0.46
Smcr8-201ENSMUST00000056907 U2surpQ6NV83 1029 aaKnown RBP12.16□□□□□ -0.46
Smcr8-201ENSMUST00000056907 Aebp2Q9Z248 504 aaKnown RBP12.16□□□□□ -0.46
Smcr8-201ENSMUST00000056907 Hsp90b1P08113 802 aaKnown RBP12.15□□□□□ -0.46
Smcr8-201ENSMUST00000056907 Arid3cA6PWV5 409 aa12.13□□□□□ -0.47
Smcr8-201ENSMUST00000056907 Znf316Q6PGE4 1016 aa12.12□□□□□ -0.47
Smcr8-201ENSMUST00000056907 Rassf8Q8CJ96 419 aa12.1□□□□□ -0.47
Smcr8-201ENSMUST00000056907 Slc4a3P16283 1227 aa12.1□□□□□ -0.47
Smcr8-201ENSMUST00000056907 Ppm1fQ8CGA0 452 aa12.09□□□□□ -0.47
Smcr8-201ENSMUST00000056907 Dcaf1Q80TR8 1506 aa12.08□□□□□ -0.48
Smcr8-201ENSMUST00000056907 Fam71e1A1L3C1 212 aa12.08□□□□□ -0.48
Smcr8-201ENSMUST00000056907 Iqcf3Q9D498 203 aa12.07□□□□□ -0.48
Smcr8-201ENSMUST00000056907 Anapc15P60007 132 aa12.07□□□□□ -0.48
Smcr8-201ENSMUST00000056907 Mtus2Q3UHD3 1353 aa12.06□□□□□ -0.48
Smcr8-201ENSMUST00000056907 Ercc6F8VPZ5 1481 aa12.06□□□□□ -0.48
Smcr8-201ENSMUST00000056907 Psme1P97371 249 aa12.05□□□□□ -0.48
Smcr8-201ENSMUST00000056907 Pcmtd1P59913 357 aa12.05□□□□□ -0.48
Smcr8-201ENSMUST00000056907 Rtf1A2AQ19 715 aaKnown RBP12.04□□□□□ -0.48
Smcr8-201ENSMUST00000056907 Znf330Q922H9 316 aa12.03□□□□□ -0.48
Smcr8-201ENSMUST00000056907 Birc3O08863 600 aa12.03□□□□□ -0.48
Smcr8-201ENSMUST00000056907 Mical1Q8VDP3 1048 aa12.03□□□□□ -0.48
Smcr8-201ENSMUST00000056907 Rsf1E9PWW9 1441 aaKnown RBP12.02□□□□□ -0.48
Smcr8-201ENSMUST00000056907 Casc1Q6TDU8 730 aa12.02□□□□□ -0.49
Smcr8-201ENSMUST00000056907 Isy1Q69ZQ2 285 aaKnown RBP12.01□□□□□ -0.49
Smcr8-201ENSMUST00000056907 Pibf1E9Q6K3 756 aa12.01□□□□□ -0.49
Smcr8-201ENSMUST00000056907 Ccdc18Q640L5 1455 aa12.01□□□□□ -0.49
Smcr8-201ENSMUST00000056907 AknaQ80VW7 1404 aa12□□□□□ -0.49
Smcr8-201ENSMUST00000056907 NudcO35685 332 aaKnown RBP11.99□□□□□ -0.49
Smcr8-201ENSMUST00000056907 Ifit1bl1D3Z6F0 470 aa11.99□□□□□ -0.49
Smcr8-201ENSMUST00000056907 Wwc2Q6NXJ0 1187 aa11.99□□□□□ -0.49
Smcr8-201ENSMUST00000056907 Txndc2Q6P902 515 aa11.99□□□□□ -0.49
Smcr8-201ENSMUST00000056907 Chrna2Q91X60 512 aa11.98□□□□□ -0.49
Smcr8-201ENSMUST00000056907 Map7O88735 730 aa11.98□□□□□ -0.49
Smcr8-201ENSMUST00000056907 Tmco5bQ80X59 307 aa11.98□□□□□ -0.49
Smcr8-201ENSMUST00000056907 Nol10Q5RJG1 687 aaKnown RBP11.97□□□□□ -0.49
Smcr8-201ENSMUST00000056907 Speer4f1Q9D5Q6 258 aa11.96□□□□□ -0.49
Smcr8-201ENSMUST00000056907 Q3TQI7 289 aaKnown RBP11.95□□□□□ -0.5
Smcr8-201ENSMUST00000056907 Hspa5P20029 655 aaKnown RBP11.95□□□□□ -0.5
Smcr8-201ENSMUST00000056907 SafbD3YXK2 937 aaKnown RBP11.95□□□□□ -0.5
Retrieved 100 of 22,080 RNA–protein pairs in 116.8 ms