RNA–Protein interactions for RNA: ENSMUST00000056907.6

Smcr8-201, Transcript of Guanine nucleotide exchange protein SMCR8, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Smcr8, Length 7,391 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smcr8-201ENSMUST00000056907 Rhox8Q6VSS7 320 aa16.86■□□□□ 0.29
Smcr8-201ENSMUST00000056907 Ehmt2Q9Z148 1263 aaKnown RBP15.49■□□□□ 0.07
Smcr8-201ENSMUST00000056907 Ube2uB1AUC4 352 aa15.03■□□□□ -0
Smcr8-201ENSMUST00000056907 Cngb1E1AZ71 1325 aa15□□□□□ -0.01
Smcr8-201ENSMUST00000056907 Esf1Q3V1V3 845 aaKnown RBP14.97□□□□□ -0.01
Smcr8-201ENSMUST00000056907 Ccdc136Q3TVA9 1136 aa14.95□□□□□ -0.02
Smcr8-201ENSMUST00000056907 Wdr66E9Q743 1299 aa14.94□□□□□ -0.02
Smcr8-201ENSMUST00000056907 Zeb1Q64318 1117 aa14.85□□□□□ -0.03
Smcr8-201ENSMUST00000056907 Gab3Q8BSM5 595 aa14.81□□□□□ -0.04
Smcr8-201ENSMUST00000056907 Las1lA2BE28 776 aaKnown RBP14.67□□□□□ -0.06
Smcr8-201ENSMUST00000056907 Npm2Q80W85 207 aa14.67□□□□□ -0.06
Smcr8-201ENSMUST00000056907 Myt1lP97500 1187 aa14.63□□□□□ -0.07
Smcr8-201ENSMUST00000056907 Rpgrip1Q9EPQ2 1331 aa14.56□□□□□ -0.08
Smcr8-201ENSMUST00000056907 Pelp1Q9DBD5 1123 aaKnown RBP14.38□□□□□ -0.11
Smcr8-201ENSMUST00000056907 Slc24a1Q91WD8 1130 aa14.32□□□□□ -0.12
Smcr8-201ENSMUST00000056907 Amer1Q7TS75 1132 aa14.24□□□□□ -0.13
Smcr8-201ENSMUST00000056907 Trim41Q5NCC3 630 aa14.21□□□□□ -0.13
Smcr8-201ENSMUST00000056907 UbtfP25976 765 aaKnown RBP14.2□□□□□ -0.14
Smcr8-201ENSMUST00000056907 Il27Q8K3I6 234 aa14.12□□□□□ -0.15
Smcr8-201ENSMUST00000056907 Ap3b1Q9Z1T1 1105 aa14.01□□□□□ -0.17
Smcr8-201ENSMUST00000056907 Neurod1Q60867 357 aa13.96□□□□□ -0.17
Smcr8-201ENSMUST00000056907 Ttbk1Q6PCN3 1308 aa13.9□□□□□ -0.18
Smcr8-201ENSMUST00000056907 Os9Q8K2C7 672 aa13.86□□□□□ -0.19
Smcr8-201ENSMUST00000056907 Ppargc1bQ8VHJ7 1014 aa13.85□□□□□ -0.19
Smcr8-201ENSMUST00000056907 Fam50aQ9WV03 339 aaKnown RBP13.78□□□□□ -0.2
Smcr8-201ENSMUST00000056907 Eif5bQ05D44 1216 aaKnown RBP13.78□□□□□ -0.2
Smcr8-201ENSMUST00000056907 Zbtb7cQ8VCZ7 619 aa13.76□□□□□ -0.21
Smcr8-201ENSMUST00000056907 CenpbP27790 599 aa13.76□□□□□ -0.21
Smcr8-201ENSMUST00000056907 NischQ80TM9 1593 aa13.71□□□□□ -0.21
Smcr8-201ENSMUST00000056907 Chic1Q8CBW7 227 aa13.69□□□□□ -0.22
Smcr8-201ENSMUST00000056907 Ifnlr1Q8CGK5 535 aa13.69□□□□□ -0.22
Smcr8-201ENSMUST00000056907 Stra8P70278 393 aa13.66□□□□□ -0.22
Smcr8-201ENSMUST00000056907 HrcG5E8J6 738 aa13.65□□□□□ -0.22
Smcr8-201ENSMUST00000056907 NclP09405 707 aaKnown RBP13.61□□□□□ -0.23
Smcr8-201ENSMUST00000056907 4933416C03RikQ3V063 378 aa13.61□□□□□ -0.23
Smcr8-201ENSMUST00000056907 NefmP08553 848 aa13.61□□□□□ -0.23
Smcr8-201ENSMUST00000056907 Acin1Q9JIX8 1338 aaKnown RBP13.59□□□□□ -0.23
Smcr8-201ENSMUST00000056907 NrdcQ8BHG1 1161 aa13.59□□□□□ -0.23
Smcr8-201ENSMUST00000056907 Gm35339A0A140LHH9 1649 aa13.58□□□□□ -0.24
Smcr8-201ENSMUST00000056907 Plppr3Q7TPB0 716 aa13.57□□□□□ -0.24
Smcr8-201ENSMUST00000056907 Zbtb4Q5F293 982 aa13.54□□□□□ -0.24
Smcr8-201ENSMUST00000056907 Gm13697A2AK42 830 aa13.52□□□□□ -0.24
Smcr8-201ENSMUST00000056907 NeflP08551 543 aa13.49□□□□□ -0.25
Smcr8-201ENSMUST00000056907 Anp32bQ9EST5 272 aaKnown RBP13.48□□□□□ -0.25
Smcr8-201ENSMUST00000056907 Prdm10Q3UTQ7 1184 aa13.47□□□□□ -0.25
Smcr8-201ENSMUST00000056907 4930567H17RikQ3V0K5 233 aa13.47□□□□□ -0.25
Smcr8-201ENSMUST00000056907 Cdk11bP24788 784 aaKnown RBP13.47□□□□□ -0.25
Smcr8-201ENSMUST00000056907 Hnrnpul2Q00PI9 745 aaKnown RBP13.47□□□□□ -0.25
Smcr8-201ENSMUST00000056907 Abcc9P70170 1546 aa13.45□□□□□ -0.26
Smcr8-201ENSMUST00000056907 Atp1b4Q99ME6 356 aa13.42□□□□□ -0.26
Smcr8-201ENSMUST00000056907 Lmod2Q3UHZ5 550 aa13.4□□□□□ -0.26
Smcr8-201ENSMUST00000056907 Zcchc6Q5BLK4 1491 aaKnown RBP13.4□□□□□ -0.26
Smcr8-201ENSMUST00000056907 Erich6D3Z6S9 713 aa13.38□□□□□ -0.27
Smcr8-201ENSMUST00000056907 Nop58Q6DFW4 536 aaKnown RBP13.32□□□□□ -0.28
Smcr8-201ENSMUST00000056907 Fkbp15Q6P9Q6 1216 aaKnown RBP13.29□□□□□ -0.28
Smcr8-201ENSMUST00000056907 Polr3glQ8R0C0 218 aa13.27□□□□□ -0.28
Smcr8-201ENSMUST00000056907 Mapk8ip2Q9ERE9 830 aa13.26□□□□□ -0.29
Smcr8-201ENSMUST00000056907 TonslQ6NZL6 1363 aa13.24□□□□□ -0.29
Smcr8-201ENSMUST00000056907 Gm13695A2AK44 830 aa13.24□□□□□ -0.29
Smcr8-201ENSMUST00000056907 ArxO35085 564 aa13.23□□□□□ -0.29
Smcr8-201ENSMUST00000056907 Rangap1P46061 589 aaKnown RBP13.23□□□□□ -0.29
Smcr8-201ENSMUST00000056907 Plekhg3Q4VAC9 1341 aa13.22□□□□□ -0.29
Smcr8-201ENSMUST00000056907 Pcgf6Q99NA9 353 aa13.21□□□□□ -0.3
Smcr8-201ENSMUST00000056907 Npm1Q61937 292 aaKnown RBP13.2□□□□□ -0.3
Smcr8-201ENSMUST00000056907 Ccdc180J3QNE4 1664 aa13.19□□□□□ -0.3
Smcr8-201ENSMUST00000056907 Nlrp6Q91WS2 869 aa13.18□□□□□ -0.3
Smcr8-201ENSMUST00000056907 Supt5hO55201 1082 aaKnown RBP13.16□□□□□ -0.3
Smcr8-201ENSMUST00000056907 Tnnt3Q9QZ47 272 aa13.14□□□□□ -0.31
Smcr8-201ENSMUST00000056907 Mier1Q5UAK0 511 aa13.13□□□□□ -0.31
Smcr8-201ENSMUST00000056907 Csrnp3P59055 597 aa13.06□□□□□ -0.32
Smcr8-201ENSMUST00000056907 DiexfQ8BTT6 772 aaKnown RBP13.05□□□□□ -0.32
Smcr8-201ENSMUST00000056907 Gm38655A0A286YDK6 273 aa13.02□□□□□ -0.32
Smcr8-201ENSMUST00000056907 Eid3Q3V124 375 aa12.98□□□□□ -0.33
Smcr8-201ENSMUST00000056907 DaxxO35613 739 aa12.97□□□□□ -0.33
Smcr8-201ENSMUST00000056907 Myt1Q8CFC2 1127 aa12.94□□□□□ -0.34
Smcr8-201ENSMUST00000056907 Rtl1Q7M732 1744 aa12.91□□□□□ -0.34
Smcr8-201ENSMUST00000056907 Safb2Q80YR5 991 aaKnown RBP12.91□□□□□ -0.34
Smcr8-201ENSMUST00000056907 P3h3Q8CG70 732 aa12.89□□□□□ -0.35
Smcr8-201ENSMUST00000056907 Irx6Q9ER75 438 aa12.88□□□□□ -0.35
Smcr8-201ENSMUST00000056907 Rad21Q61550 635 aaKnown RBP12.86□□□□□ -0.35
Smcr8-201ENSMUST00000056907 Ythdc1E9Q5K9 736 aaKnown RBP12.83□□□□□ -0.36
Smcr8-201ENSMUST00000056907 Chic2Q9D9G3 165 aa12.82□□□□□ -0.36
Smcr8-201ENSMUST00000056907 Trim26Q99PN3 545 aa12.81□□□□□ -0.36
Smcr8-201ENSMUST00000056907 Vsig10D3YX43 558 aa12.8□□□□□ -0.36
Smcr8-201ENSMUST00000056907 Ubl4bQ9CQ84 188 aa12.75□□□□□ -0.37
Smcr8-201ENSMUST00000056907 CatipB9EKE5 520 aa12.74□□□□□ -0.37
Smcr8-201ENSMUST00000056907 ClspnQ80YR7 1315 aa12.73□□□□□ -0.37
Smcr8-201ENSMUST00000056907 Anp32aO35381 247 aa12.72□□□□□ -0.37
Smcr8-201ENSMUST00000056907 Lmod3E9QA62 571 aa12.67□□□□□ -0.38
Smcr8-201ENSMUST00000056907 Clip1Q922J3 1391 aa12.66□□□□□ -0.38
Smcr8-201ENSMUST00000056907 Hsp90aa1P07901 733 aaKnown RBP12.66□□□□□ -0.38
Smcr8-201ENSMUST00000056907 Rtl5Q5DTT4 599 aa12.65□□□□□ -0.38
Smcr8-201ENSMUST00000056907 Rtn4Q99P72 1162 aaKnown RBP12.65□□□□□ -0.38
Smcr8-201ENSMUST00000056907 Fgd1P52734 960 aa12.65□□□□□ -0.38
Smcr8-201ENSMUST00000056907 DekQ7TNV0 380 aaKnown RBP12.64□□□□□ -0.39
Smcr8-201ENSMUST00000056907 Ppp4r2Q0VGB7 417 aa12.63□□□□□ -0.39
Smcr8-201ENSMUST00000056907 Arid4bA2CG63 1314 aaKnown RBP12.62□□□□□ -0.39
Smcr8-201ENSMUST00000056907 MyclP10166 368 aa12.62□□□□□ -0.39
Smcr8-201ENSMUST00000056907 NgefQ8CHT1 710 aa12.62□□□□□ -0.39
Smcr8-201ENSMUST00000056907 Clstn1Q9EPL2 979 aa12.61□□□□□ -0.39
Retrieved 100 of 22,080 RNA–protein pairs in 143 ms