RNA–Protein interactions for RNA: ENSMUST00000055226.12

Fn1-201, Transcript of Fibronectin, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Fn1, Length 8,315 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Fn1-201ENSMUST00000055226 Aplp2Q06335 707 aa16.05■□□□□ 0.16
Fn1-201ENSMUST00000055226 NgefQ8CHT1 710 aa16.03■□□□□ 0.16
Fn1-201ENSMUST00000055226 Mapk8ip2Q9ERE9 830 aa16.03■□□□□ 0.16
Fn1-201ENSMUST00000055226 Ccer2J3QPU5 274 aa16.02■□□□□ 0.16
Fn1-201ENSMUST00000055226 Pes1Q9EQ61 584 aaKnown RBP16.01■□□□□ 0.15
Fn1-201ENSMUST00000055226 Exosc9Q9JHI7 438 aaKnown RBP16.01■□□□□ 0.15
Fn1-201ENSMUST00000055226 Trim44Q9QXA7 346 aa16■□□□□ 0.15
Fn1-201ENSMUST00000055226 Gm6268A2A3U9 297 aa15.98■□□□□ 0.15
Fn1-201ENSMUST00000055226 Zfp777B9EKF4 885 aa15.97■□□□□ 0.15
Fn1-201ENSMUST00000055226 Noc3lQ8VI84 807 aaKnown RBP15.96■□□□□ 0.15
Fn1-201ENSMUST00000055226 Q8BT18 775 aa15.95■□□□□ 0.14
Fn1-201ENSMUST00000055226 Clip1Q922J3 1391 aa15.94■□□□□ 0.14
Fn1-201ENSMUST00000055226 PtmaP26350 111 aa15.93■□□□□ 0.14
Fn1-201ENSMUST00000055226 Iqcf3Q9D498 203 aa15.91■□□□□ 0.14
Fn1-201ENSMUST00000055226 Chic2Q9D9G3 165 aa15.91■□□□□ 0.14
Fn1-201ENSMUST00000055226 Eid3Q3V124 375 aa15.91■□□□□ 0.14
Fn1-201ENSMUST00000055226 Srpk2O54781 681 aaKnown RBP15.9■□□□□ 0.14
Fn1-201ENSMUST00000055226 Dnai2A2AC93 623 aa15.89■□□□□ 0.13
Fn1-201ENSMUST00000055226 Supt5hO55201 1082 aaKnown RBP15.89■□□□□ 0.13
Fn1-201ENSMUST00000055226 Ppm1fQ8CGA0 452 aa15.88■□□□□ 0.13
Fn1-201ENSMUST00000055226 Prm3Q62100 101 aa15.87■□□□□ 0.13
Fn1-201ENSMUST00000055226 Sh3bp5Q9Z131 463 aa15.87■□□□□ 0.13
Fn1-201ENSMUST00000055226 Mapk8ip3Q9ESN9 1337 aa15.86■□□□□ 0.13
Fn1-201ENSMUST00000055226 Hsp90ab1P11499 724 aaKnown RBP15.85■□□□□ 0.13
Fn1-201ENSMUST00000055226 Brd4Q9ESU6 1400 aaKnown RBP15.83■□□□□ 0.12
Fn1-201ENSMUST00000055226 Kdm2aP59997 1161 aa15.82■□□□□ 0.12
Fn1-201ENSMUST00000055226 Ppp1r18Q8BQ30 594 aa15.82■□□□□ 0.12
Fn1-201ENSMUST00000055226 Chmp4bQ9D8B3 224 aaKnown RBP15.81■□□□□ 0.12
Fn1-201ENSMUST00000055226 Ppp4r2Q0VGB7 417 aa15.8■□□□□ 0.12
Fn1-201ENSMUST00000055226 Arid4bA2CG63 1314 aaKnown RBP15.79■□□□□ 0.12
Fn1-201ENSMUST00000055226 Nol10Q5RJG1 687 aaKnown RBP15.79■□□□□ 0.12
Fn1-201ENSMUST00000055226 Anapc15P60007 132 aa15.78■□□□□ 0.12
Fn1-201ENSMUST00000055226 Isy1Q69ZQ2 285 aaKnown RBP15.78■□□□□ 0.12
Fn1-201ENSMUST00000055226 Trim30dE9PWL0 497 aa15.78■□□□□ 0.12
Fn1-201ENSMUST00000055226 Grwd1Q810D6 446 aaKnown RBP15.77■□□□□ 0.12
Fn1-201ENSMUST00000055226 Adam1bQ8R534 806 aa15.77■□□□□ 0.12
Fn1-201ENSMUST00000055226 HdgfP51859 237 aaKnown RBP15.77■□□□□ 0.12
Fn1-201ENSMUST00000055226 Stag3O70576 1240 aa15.77■□□□□ 0.11
Fn1-201ENSMUST00000055226 Gm20521D3Z5F7 333 aa15.76■□□□□ 0.11
Fn1-201ENSMUST00000055226 1700019A02RikA0A087WPV9 146 aa15.74■□□□□ 0.11
Fn1-201ENSMUST00000055226 Mroh3A0A1D5RM54 893 aa15.74■□□□□ 0.11
Fn1-201ENSMUST00000055226 BlmO88700 1416 aa15.73■□□□□ 0.11
Fn1-201ENSMUST00000055226 Calr4Q3TQS0 420 aa15.73■□□□□ 0.11
Fn1-201ENSMUST00000055226 MlecQ6ZQI3 291 aaKnown RBP15.73■□□□□ 0.11
Fn1-201ENSMUST00000055226 Rgl3Q3UYI5 709 aa15.73■□□□□ 0.11
Fn1-201ENSMUST00000055226 Rassf8Q8CJ96 419 aa15.71■□□□□ 0.11
Fn1-201ENSMUST00000055226 Casc1Q6TDU8 730 aa15.71■□□□□ 0.11
Fn1-201ENSMUST00000055226 MccE9PWI3 1003 aa15.67■□□□□ 0.1
Fn1-201ENSMUST00000055226 Hsp90b1P08113 802 aaKnown RBP15.67■□□□□ 0.1
Fn1-201ENSMUST00000055226 Map7O88735 730 aa15.67■□□□□ 0.1
Fn1-201ENSMUST00000055226 Mrs2Q5NCE8 434 aa15.67■□□□□ 0.1
Fn1-201ENSMUST00000055226 NudcO35685 332 aaKnown RBP15.67■□□□□ 0.1
Fn1-201ENSMUST00000055226 Wwc2Q6NXJ0 1187 aa15.66■□□□□ 0.1
Fn1-201ENSMUST00000055226 Arhgap27A2AB59 869 aa15.66■□□□□ 0.1
Fn1-201ENSMUST00000055226 Rtf1A2AQ19 715 aaKnown RBP15.66■□□□□ 0.1
Fn1-201ENSMUST00000055226 Plcb2A3KGF7 1181 aa15.66■□□□□ 0.1
Fn1-201ENSMUST00000055226 Vps53Q8CCB4 832 aa15.65■□□□□ 0.1
Fn1-201ENSMUST00000055226 Stk24Q99KH8 431 aa15.65■□□□□ 0.1
Fn1-201ENSMUST00000055226 Tpm3-rs7D3Z2H9 248 aa15.65■□□□□ 0.1
Fn1-201ENSMUST00000055226 Mak16Q8BGS0 296 aaKnown RBP15.64■□□□□ 0.09
Fn1-201ENSMUST00000055226 Ubap1lG3UW59 384 aa15.63■□□□□ 0.09
Fn1-201ENSMUST00000055226 Ercc6F8VPZ5 1481 aa15.62■□□□□ 0.09
Fn1-201ENSMUST00000055226 Gm973E9Q295 1059 aa15.62■□□□□ 0.09
Fn1-201ENSMUST00000055226 CanxP35564 591 aaKnown RBP15.6■□□□□ 0.09
Fn1-201ENSMUST00000055226 Wdr43Q6ZQL4 677 aaKnown RBP15.6■□□□□ 0.09
Fn1-201ENSMUST00000055226 Htatsf1Q8BGC0 757 aa15.58■□□□□ 0.08
Fn1-201ENSMUST00000055226 Ciz1Q8VEH2 845 aa15.57■□□□□ 0.08
Fn1-201ENSMUST00000055226 Pde3bQ61409 1100 aa15.57■□□□□ 0.08
Fn1-201ENSMUST00000055226 Tomm22Q9CPQ3 142 aa15.57■□□□□ 0.08
Fn1-201ENSMUST00000055226 Rrp7aQ9D1C9 280 aaKnown RBP15.56■□□□□ 0.08
Fn1-201ENSMUST00000055226 Neurod2Q62414 383 aa15.55■□□□□ 0.08
Fn1-201ENSMUST00000055226 Calcoco2A2A6M5 331 aa15.54■□□□□ 0.08
Fn1-201ENSMUST00000055226 Paf1Q8K2T8 535 aa15.53■□□□□ 0.08
Fn1-201ENSMUST00000055226 Apbb1Q9QXJ1 710 aa15.53■□□□□ 0.08
Fn1-201ENSMUST00000055226 Ccdc18Q640L5 1455 aa15.53■□□□□ 0.08
Fn1-201ENSMUST00000055226 Psme1P97371 249 aa15.51■□□□□ 0.07
Fn1-201ENSMUST00000055226 Sart3Q9JLI8 962 aaKnown RBP15.51■□□□□ 0.07
Fn1-201ENSMUST00000055226 Card11Q8CIS0 1159 aa15.5■□□□□ 0.07
Fn1-201ENSMUST00000055226 HnrnpuQ8VEK3 800 aaKnown RBP15.49■□□□□ 0.07
Fn1-201ENSMUST00000055226 KnstrnQ9D9Z1 312 aaKnown RBP15.49■□□□□ 0.07
Fn1-201ENSMUST00000055226 Ccdc9Q8VC31 543 aaKnown RBP15.48■□□□□ 0.07
Fn1-201ENSMUST00000055226 Mtus2Q3UHD3 1353 aa15.48■□□□□ 0.07
Fn1-201ENSMUST00000055226 Chrna2Q91X60 512 aa15.47■□□□□ 0.07
Fn1-201ENSMUST00000055226 Iffo2Q8R2V2 512 aa15.46■□□□□ 0.07
Fn1-201ENSMUST00000055226 Pcmtd1P59913 357 aa15.46■□□□□ 0.07
Fn1-201ENSMUST00000055226 SetQ9EQU5 289 aaKnown RBP15.45■□□□□ 0.06
Fn1-201ENSMUST00000055226 Cnga1P29974 684 aa15.45■□□□□ 0.06
Fn1-201ENSMUST00000055226 Ofd1Q80Z25 1017 aa15.45■□□□□ 0.06
Fn1-201ENSMUST00000055226 Znf316Q6PGE4 1016 aa15.45■□□□□ 0.06
Fn1-201ENSMUST00000055226 Kri1Q8VDQ9 704 aaKnown RBP15.44■□□□□ 0.06
Fn1-201ENSMUST00000055226 U2surpQ6NV83 1029 aaKnown RBP15.44■□□□□ 0.06
Fn1-201ENSMUST00000055226 Chmp3Q9CQ10 224 aa15.44■□□□□ 0.06
Fn1-201ENSMUST00000055226 Rb1cc1Q9ESK9 1588 aa15.44■□□□□ 0.06
Fn1-201ENSMUST00000055226 Setd5Q5XJV7 1441 aa15.43■□□□□ 0.06
Fn1-201ENSMUST00000055226 MecomP14404 1042 aa15.43■□□□□ 0.06
Fn1-201ENSMUST00000055226 Sox12Q04890 314 aa15.43■□□□□ 0.06
Fn1-201ENSMUST00000055226 Spag9Q58A65 1321 aaKnown RBP15.43■□□□□ 0.06
Fn1-201ENSMUST00000055226 Gm38655A0A286YDK6 273 aa15.42■□□□□ 0.06
Fn1-201ENSMUST00000055226 Odf2A3KGV1 830 aaKnown RBP15.42■□□□□ 0.06
Fn1-201ENSMUST00000055226 Armcx1Q9CX83 456 aa15.42■□□□□ 0.06
Retrieved 100 of 22,080 RNA–protein pairs in 50.6 ms