RNA–Protein interactions for RNA: ENSMUST00000033898.9

Col4a1-201, Transcript of Collagen alpha-1(IV) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col4a1, Length 6,615 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1-201ENSMUST00000033898 Rtn4Q99P72 1162 aaKnown RBP19.05■□□□□ 0.64
Col4a1-201ENSMUST00000033898 Znf326O88291 580 aa19.04■□□□□ 0.64
Col4a1-201ENSMUST00000033898 Ubl4bQ9CQ84 188 aa19.04■□□□□ 0.64
Col4a1-201ENSMUST00000033898 Clstn1Q9EPL2 979 aa19.03■□□□□ 0.64
Col4a1-201ENSMUST00000033898 Wdr43Q6ZQL4 677 aaKnown RBP19■□□□□ 0.63
Col4a1-201ENSMUST00000033898 Apbb1Q9QXJ1 710 aa18.98■□□□□ 0.63
Col4a1-201ENSMUST00000033898 Hsp90ab1P11499 724 aaKnown RBP18.98■□□□□ 0.63
Col4a1-201ENSMUST00000033898 Anks4bQ8K3X6 423 aa18.97■□□□□ 0.63
Col4a1-201ENSMUST00000033898 Trim30dE9PWL0 497 aa18.96■□□□□ 0.63
Col4a1-201ENSMUST00000033898 Rgl3Q3UYI5 709 aa18.95■□□□□ 0.62
Col4a1-201ENSMUST00000033898 Trim44Q9QXA7 346 aa18.94■□□□□ 0.62
Col4a1-201ENSMUST00000033898 NgefQ8CHT1 710 aa18.92■□□□□ 0.62
Col4a1-201ENSMUST00000033898 Kdm2aP59997 1161 aa18.91■□□□□ 0.62
Col4a1-201ENSMUST00000033898 PtmaP26350 111 aa18.91■□□□□ 0.62
Col4a1-201ENSMUST00000033898 CanxP35564 591 aaKnown RBP18.9■□□□□ 0.62
Col4a1-201ENSMUST00000033898 BlmO88700 1416 aa18.89■□□□□ 0.61
Col4a1-201ENSMUST00000033898 Ccer2J3QPU5 274 aa18.86■□□□□ 0.61
Col4a1-201ENSMUST00000033898 Neurod2Q62414 383 aa18.85■□□□□ 0.61
Col4a1-201ENSMUST00000033898 Grwd1Q810D6 446 aaKnown RBP18.83■□□□□ 0.6
Col4a1-201ENSMUST00000033898 Armcx1Q9CX83 456 aa18.82■□□□□ 0.6
Col4a1-201ENSMUST00000033898 Plcb2A3KGF7 1181 aa18.81■□□□□ 0.6
Col4a1-201ENSMUST00000033898 Aplp2Q06335 707 aa18.81■□□□□ 0.6
Col4a1-201ENSMUST00000033898 MyclP10166 368 aa18.8■□□□□ 0.6
Col4a1-201ENSMUST00000033898 Clstn2Q9ER65 966 aa18.79■□□□□ 0.6
Col4a1-201ENSMUST00000033898 1700019A02RikA0A087WPV9 146 aa18.76■□□□□ 0.59
Col4a1-201ENSMUST00000033898 Ecm2Q5FW85 670 aa18.76■□□□□ 0.59
Col4a1-201ENSMUST00000033898 Dbr1Q923B1 550 aa18.76■□□□□ 0.59
Col4a1-201ENSMUST00000033898 IqubQ8CDK3 788 aa18.75■□□□□ 0.59
Col4a1-201ENSMUST00000033898 Exosc9Q9JHI7 438 aaKnown RBP18.75■□□□□ 0.59
Col4a1-201ENSMUST00000033898 Gm6268A2A3U9 297 aa18.75■□□□□ 0.59
Col4a1-201ENSMUST00000033898 Ofd1Q80Z25 1017 aa18.74■□□□□ 0.59
Col4a1-201ENSMUST00000033898 Spryd3E9Q9B3 442 aa18.72■□□□□ 0.59
Col4a1-201ENSMUST00000033898 Brd4Q9ESU6 1400 aaKnown RBP18.72■□□□□ 0.59
Col4a1-201ENSMUST00000033898 Srpk2O54781 681 aaKnown RBP18.7■□□□□ 0.58
Col4a1-201ENSMUST00000033898 Gm20521D3Z5F7 333 aa18.67■□□□□ 0.58
Col4a1-201ENSMUST00000033898 PnnO35691 725 aaKnown RBP18.67■□□□□ 0.58
Col4a1-201ENSMUST00000033898 Stk24Q99KH8 431 aa18.66■□□□□ 0.58
Col4a1-201ENSMUST00000033898 Cnga1P29974 684 aa18.65■□□□□ 0.58
Col4a1-201ENSMUST00000033898 Pes1Q9EQ61 584 aaKnown RBP18.65■□□□□ 0.58
Col4a1-201ENSMUST00000033898 Fam71e1A1L3C1 212 aa18.64■□□□□ 0.57
Col4a1-201ENSMUST00000033898 Mapk8ip3Q9ESN9 1337 aa18.64■□□□□ 0.57
Col4a1-201ENSMUST00000033898 Mroh3A0A1D5RM54 893 aa18.63■□□□□ 0.57
Col4a1-201ENSMUST00000033898 Arhgap27A2AB59 869 aa18.6■□□□□ 0.57
Col4a1-201ENSMUST00000033898 B4galnt3Q6L8S8 986 aa18.6■□□□□ 0.57
Col4a1-201ENSMUST00000033898 Stag3O70576 1240 aa18.59■□□□□ 0.57
Col4a1-201ENSMUST00000033898 Card11Q8CIS0 1159 aa18.59■□□□□ 0.57
Col4a1-201ENSMUST00000033898 Cep164Q5DU05 1446 aa18.58■□□□□ 0.56
Col4a1-201ENSMUST00000033898 Aebp2Q9Z248 504 aaKnown RBP18.57■□□□□ 0.56
Col4a1-201ENSMUST00000033898 Setd5Q5XJV7 1441 aa18.57■□□□□ 0.56
Col4a1-201ENSMUST00000033898 Sh3bp5Q9Z131 463 aa18.55■□□□□ 0.56
Col4a1-201ENSMUST00000033898 Plin1Q8CGN5 517 aa18.54■□□□□ 0.56
Col4a1-201ENSMUST00000033898 Hsp90b1P08113 802 aaKnown RBP18.54■□□□□ 0.56
Col4a1-201ENSMUST00000033898 Rrp7aQ9D1C9 280 aaKnown RBP18.54■□□□□ 0.56
Col4a1-201ENSMUST00000033898 Znf316Q6PGE4 1016 aa18.52■□□□□ 0.56
Col4a1-201ENSMUST00000033898 Q8BT18 775 aa18.5■□□□□ 0.55
Col4a1-201ENSMUST00000033898 Casc1Q6TDU8 730 aa18.49■□□□□ 0.55
Col4a1-201ENSMUST00000033898 Slc4a3P16283 1227 aa18.47■□□□□ 0.55
Col4a1-201ENSMUST00000033898 Htatsf1Q8BGC0 757 aa18.45■□□□□ 0.54
Col4a1-201ENSMUST00000033898 Dcaf1Q80TR8 1506 aa18.44■□□□□ 0.54
Col4a1-201ENSMUST00000033898 Ggt6Q6PDE7 497 aa18.44■□□□□ 0.54
Col4a1-201ENSMUST00000033898 Abcc8B2RUS7 1588 aa18.43■□□□□ 0.54
Col4a1-201ENSMUST00000033898 Anapc15P60007 132 aa18.43■□□□□ 0.54
Col4a1-201ENSMUST00000033898 Senp3Q9EP97 568 aaKnown RBP18.43■□□□□ 0.54
Col4a1-201ENSMUST00000033898 Rassf8Q8CJ96 419 aa18.42■□□□□ 0.54
Col4a1-201ENSMUST00000033898 Pcmtd1P59913 357 aa18.41■□□□□ 0.54
Col4a1-201ENSMUST00000033898 U2surpQ6NV83 1029 aaKnown RBP18.41■□□□□ 0.54
Col4a1-201ENSMUST00000033898 Map7O88735 730 aa18.39■□□□□ 0.53
Col4a1-201ENSMUST00000033898 Iqcf3Q9D498 203 aa18.39■□□□□ 0.53
Col4a1-201ENSMUST00000033898 Tnnt1O88346 262 aa18.38■□□□□ 0.53
Col4a1-201ENSMUST00000033898 Ccdc9Q8VC31 543 aaKnown RBP18.38■□□□□ 0.53
Col4a1-201ENSMUST00000033898 Erich6bQ9D4S6 220 aa18.36■□□□□ 0.53
Col4a1-201ENSMUST00000033898 1700123L14RikQ3V2K7 440 aa18.35■□□□□ 0.53
Col4a1-201ENSMUST00000033898 Stk26Q99JT2 416 aa18.34■□□□□ 0.53
Col4a1-201ENSMUST00000033898 Ppm1gQ61074 542 aa18.33■□□□□ 0.53
Col4a1-201ENSMUST00000033898 SafbD3YXK2 937 aaKnown RBP18.33■□□□□ 0.52
Col4a1-201ENSMUST00000033898 NudcO35685 332 aaKnown RBP18.33■□□□□ 0.52
Col4a1-201ENSMUST00000033898 Ccdc27Q3V036 639 aa18.32■□□□□ 0.52
Col4a1-201ENSMUST00000033898 Ppp1r18Q8BQ30 594 aa18.31■□□□□ 0.52
Col4a1-201ENSMUST00000033898 Kif15Q6P9L6 1387 aa18.3■□□□□ 0.52
Col4a1-201ENSMUST00000033898 Rb1cc1Q9ESK9 1588 aa18.29■□□□□ 0.52
Col4a1-201ENSMUST00000033898 MccE9PWI3 1003 aa18.28■□□□□ 0.52
Col4a1-201ENSMUST00000033898 Sox12Q04890 314 aa18.28■□□□□ 0.52
Col4a1-201ENSMUST00000033898 Rtf1A2AQ19 715 aaKnown RBP18.27■□□□□ 0.52
Col4a1-201ENSMUST00000033898 Wwc2Q6NXJ0 1187 aa18.27■□□□□ 0.52
Col4a1-201ENSMUST00000033898 Mtus2Q3UHD3 1353 aa18.27■□□□□ 0.52
Col4a1-201ENSMUST00000033898 Mical1Q8VDP3 1048 aa18.27■□□□□ 0.51
Col4a1-201ENSMUST00000033898 Ubap1lG3UW59 384 aa18.26■□□□□ 0.51
Col4a1-201ENSMUST00000033898 Chmp4bQ9D8B3 224 aaKnown RBP18.26■□□□□ 0.51
Col4a1-201ENSMUST00000033898 Cwc22Q8C5N3 908 aaKnown RBP18.25■□□□□ 0.51
Col4a1-201ENSMUST00000033898 Znf330Q922H9 316 aa18.25■□□□□ 0.51
Col4a1-201ENSMUST00000033898 CgnP59242 1191 aa18.24■□□□□ 0.51
Col4a1-201ENSMUST00000033898 KnstrnQ9D9Z1 312 aaKnown RBP18.23■□□□□ 0.51
Col4a1-201ENSMUST00000033898 Dnttip2Q8R2M2 758 aaKnown RBP18.23■□□□□ 0.51
Col4a1-201ENSMUST00000033898 Adam1bQ8R534 806 aa18.23■□□□□ 0.51
Col4a1-201ENSMUST00000033898 Mak16Q8BGS0 296 aaKnown RBP18.23■□□□□ 0.51
Col4a1-201ENSMUST00000033898 Tmco5bQ80X59 307 aa18.23■□□□□ 0.51
Col4a1-201ENSMUST00000033898 Isy1Q69ZQ2 285 aaKnown RBP18.22■□□□□ 0.51
Col4a1-201ENSMUST00000033898 Speer4f1Q9D5Q6 258 aa18.21■□□□□ 0.51
Col4a1-201ENSMUST00000033898 Rwdd1Q9CQK7 243 aa18.2■□□□□ 0.5
Col4a1-201ENSMUST00000033898 Cluap1Q8R3P7 413 aa18.19■□□□□ 0.5
Retrieved 100 of 22,080 RNA–protein pairs in 16.1 ms