RNA–Protein interactions for RNA: ENSMUST00000024627.13

Chd1-202, Transcript of Chromodomain-helicase-DNA-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Chd1, Length 7,916 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1-202ENSMUST00000024627 MyclP10166 368 aa18.35■□□□□ 0.53
Chd1-202ENSMUST00000024627 NgefQ8CHT1 710 aa18.31■□□□□ 0.52
Chd1-202ENSMUST00000024627 Clip1Q922J3 1391 aa18.29■□□□□ 0.52
Chd1-202ENSMUST00000024627 Calr4Q3TQS0 420 aa18.23■□□□□ 0.51
Chd1-202ENSMUST00000024627 Kdm2aP59997 1161 aa18.2■□□□□ 0.5
Chd1-202ENSMUST00000024627 Trim44Q9QXA7 346 aa18.14■□□□□ 0.49
Chd1-202ENSMUST00000024627 Trim30dE9PWL0 497 aa18.12■□□□□ 0.49
Chd1-202ENSMUST00000024627 Rgl3Q3UYI5 709 aa18.12■□□□□ 0.49
Chd1-202ENSMUST00000024627 Mrs2Q5NCE8 434 aa18.12■□□□□ 0.49
Chd1-202ENSMUST00000024627 Apbb1Q9QXJ1 710 aa18.11■□□□□ 0.49
Chd1-202ENSMUST00000024627 Hsp90ab1P11499 724 aaKnown RBP18.1■□□□□ 0.49
Chd1-202ENSMUST00000024627 Exosc9Q9JHI7 438 aaKnown RBP18.09■□□□□ 0.49
Chd1-202ENSMUST00000024627 Aplp2Q06335 707 aa18.09■□□□□ 0.49
Chd1-202ENSMUST00000024627 BlmO88700 1416 aa18.09■□□□□ 0.49
Chd1-202ENSMUST00000024627 1700019A02RikA0A087WPV9 146 aa18.08■□□□□ 0.49
Chd1-202ENSMUST00000024627 PtmaP26350 111 aa18.07■□□□□ 0.48
Chd1-202ENSMUST00000024627 Ecm2Q5FW85 670 aa18.07■□□□□ 0.48
Chd1-202ENSMUST00000024627 Grwd1Q810D6 446 aaKnown RBP18.04■□□□□ 0.48
Chd1-202ENSMUST00000024627 Sall2Q9QX96 1004 aa18.03■□□□□ 0.48
Chd1-202ENSMUST00000024627 IqubQ8CDK3 788 aa18.03■□□□□ 0.48
Chd1-202ENSMUST00000024627 Q8BT18 775 aa18.03■□□□□ 0.48
Chd1-202ENSMUST00000024627 PnnO35691 725 aaKnown RBP18.02■□□□□ 0.48
Chd1-202ENSMUST00000024627 Neurod2Q62414 383 aa18.01■□□□□ 0.47
Chd1-202ENSMUST00000024627 Wdr43Q6ZQL4 677 aaKnown RBP17.99■□□□□ 0.47
Chd1-202ENSMUST00000024627 Clstn2Q9ER65 966 aa17.97■□□□□ 0.47
Chd1-202ENSMUST00000024627 Ggt6Q6PDE7 497 aa17.97■□□□□ 0.47
Chd1-202ENSMUST00000024627 Armcx1Q9CX83 456 aa17.97■□□□□ 0.47
Chd1-202ENSMUST00000024627 Gm6268A2A3U9 297 aa17.96■□□□□ 0.47
Chd1-202ENSMUST00000024627 Pes1Q9EQ61 584 aaKnown RBP17.95■□□□□ 0.46
Chd1-202ENSMUST00000024627 CanxP35564 591 aaKnown RBP17.95■□□□□ 0.46
Chd1-202ENSMUST00000024627 Plcb2A3KGF7 1181 aa17.93■□□□□ 0.46
Chd1-202ENSMUST00000024627 Srpk2O54781 681 aaKnown RBP17.92■□□□□ 0.46
Chd1-202ENSMUST00000024627 Stk24Q99KH8 431 aa17.92■□□□□ 0.46
Chd1-202ENSMUST00000024627 Plin1Q8CGN5 517 aa17.91■□□□□ 0.46
Chd1-202ENSMUST00000024627 Ccer2J3QPU5 274 aa17.91■□□□□ 0.46
Chd1-202ENSMUST00000024627 Gm20521D3Z5F7 333 aa17.9■□□□□ 0.46
Chd1-202ENSMUST00000024627 Mroh3A0A1D5RM54 893 aa17.9■□□□□ 0.46
Chd1-202ENSMUST00000024627 Ubap1lG3UW59 384 aa17.88■□□□□ 0.45
Chd1-202ENSMUST00000024627 Arhgap27A2AB59 869 aa17.88■□□□□ 0.45
Chd1-202ENSMUST00000024627 Brd4Q9ESU6 1400 aaKnown RBP17.88■□□□□ 0.45
Chd1-202ENSMUST00000024627 Sh3bp5Q9Z131 463 aa17.87■□□□□ 0.45
Chd1-202ENSMUST00000024627 Spryd3E9Q9B3 442 aa17.86■□□□□ 0.45
Chd1-202ENSMUST00000024627 Stag3O70576 1240 aa17.86■□□□□ 0.45
Chd1-202ENSMUST00000024627 Cnga1P29974 684 aa17.86■□□□□ 0.45
Chd1-202ENSMUST00000024627 Dbr1Q923B1 550 aa17.85■□□□□ 0.45
Chd1-202ENSMUST00000024627 Mapk8ip3Q9ESN9 1337 aa17.83■□□□□ 0.44
Chd1-202ENSMUST00000024627 Ofd1Q80Z25 1017 aa17.8■□□□□ 0.44
Chd1-202ENSMUST00000024627 Rb1cc1Q9ESK9 1588 aa17.8■□□□□ 0.44
Chd1-202ENSMUST00000024627 Anks4bQ8K3X6 423 aa17.8■□□□□ 0.44
Chd1-202ENSMUST00000024627 Znf316Q6PGE4 1016 aa17.78■□□□□ 0.44
Chd1-202ENSMUST00000024627 Rrp7aQ9D1C9 280 aaKnown RBP17.77■□□□□ 0.44
Chd1-202ENSMUST00000024627 Ppp1r18Q8BQ30 594 aa17.75■□□□□ 0.43
Chd1-202ENSMUST00000024627 Rassf8Q8CJ96 419 aa17.73■□□□□ 0.43
Chd1-202ENSMUST00000024627 Anapc15P60007 132 aa17.73■□□□□ 0.43
Chd1-202ENSMUST00000024627 Card11Q8CIS0 1159 aa17.73■□□□□ 0.43
Chd1-202ENSMUST00000024627 Senp3Q9EP97 568 aaKnown RBP17.72■□□□□ 0.43
Chd1-202ENSMUST00000024627 Hsp90b1P08113 802 aaKnown RBP17.72■□□□□ 0.43
Chd1-202ENSMUST00000024627 Pcmtd1P59913 357 aa17.71■□□□□ 0.43
Chd1-202ENSMUST00000024627 Prm3Q62100 101 aa17.7■□□□□ 0.42
Chd1-202ENSMUST00000024627 Casc1Q6TDU8 730 aa17.69■□□□□ 0.42
Chd1-202ENSMUST00000024627 U2surpQ6NV83 1029 aaKnown RBP17.69■□□□□ 0.42
Chd1-202ENSMUST00000024627 B4galnt3Q6L8S8 986 aa17.69■□□□□ 0.42
Chd1-202ENSMUST00000024627 Setd5Q5XJV7 1441 aa17.68■□□□□ 0.42
Chd1-202ENSMUST00000024627 Iqcf3Q9D498 203 aa17.68■□□□□ 0.42
Chd1-202ENSMUST00000024627 Isy1Q69ZQ2 285 aaKnown RBP17.67■□□□□ 0.42
Chd1-202ENSMUST00000024627 Stk26Q99JT2 416 aa17.65■□□□□ 0.42
Chd1-202ENSMUST00000024627 Ppm1fQ8CGA0 452 aa17.65■□□□□ 0.42
Chd1-202ENSMUST00000024627 Slc4a1apE9PX68 744 aa17.65■□□□□ 0.42
Chd1-202ENSMUST00000024627 MlecQ6ZQI3 291 aaKnown RBP17.64■□□□□ 0.42
Chd1-202ENSMUST00000024627 Tnnt1O88346 262 aa17.64■□□□□ 0.41
Chd1-202ENSMUST00000024627 Sox12Q04890 314 aa17.63■□□□□ 0.41
Chd1-202ENSMUST00000024627 Mical1Q8VDP3 1048 aa17.62■□□□□ 0.41
Chd1-202ENSMUST00000024627 Noc3lQ8VI84 807 aaKnown RBP17.61■□□□□ 0.41
Chd1-202ENSMUST00000024627 Fam71e1A1L3C1 212 aa17.59■□□□□ 0.41
Chd1-202ENSMUST00000024627 Rtf1A2AQ19 715 aaKnown RBP17.59■□□□□ 0.41
Chd1-202ENSMUST00000024627 Htatsf1Q8BGC0 757 aa17.58■□□□□ 0.41
Chd1-202ENSMUST00000024627 Map7O88735 730 aa17.58■□□□□ 0.4
Chd1-202ENSMUST00000024627 Wwc2Q6NXJ0 1187 aa17.57■□□□□ 0.4
Chd1-202ENSMUST00000024627 Slc4a3P16283 1227 aa17.55■□□□□ 0.4
Chd1-202ENSMUST00000024627 Nol10Q5RJG1 687 aaKnown RBP17.55■□□□□ 0.4
Chd1-202ENSMUST00000024627 Erich6bQ9D4S6 220 aa17.55■□□□□ 0.4
Chd1-202ENSMUST00000024627 Cep164Q5DU05 1446 aa17.54■□□□□ 0.4
Chd1-202ENSMUST00000024627 Eif4g2Q62448 906 aaKnown RBP17.54■□□□□ 0.4
Chd1-202ENSMUST00000024627 Vps53Q8CCB4 832 aa17.54■□□□□ 0.4
Chd1-202ENSMUST00000024627 MccE9PWI3 1003 aa17.51■□□□□ 0.39
Chd1-202ENSMUST00000024627 Kif15Q6P9L6 1387 aa17.51■□□□□ 0.39
Chd1-202ENSMUST00000024627 Mak16Q8BGS0 296 aaKnown RBP17.5■□□□□ 0.39
Chd1-202ENSMUST00000024627 Tmco5bQ80X59 307 aa17.49■□□□□ 0.39
Chd1-202ENSMUST00000024627 Dcaf1Q80TR8 1506 aa17.48■□□□□ 0.39
Chd1-202ENSMUST00000024627 Psme1P97371 249 aa17.48■□□□□ 0.39
Chd1-202ENSMUST00000024627 NudcO35685 332 aaKnown RBP17.48■□□□□ 0.39
Chd1-202ENSMUST00000024627 Mtus2Q3UHD3 1353 aa17.48■□□□□ 0.39
Chd1-202ENSMUST00000024627 Adam1bQ8R534 806 aa17.47■□□□□ 0.39
Chd1-202ENSMUST00000024627 Birc3O08863 600 aa17.47■□□□□ 0.39
Chd1-202ENSMUST00000024627 CgnP59242 1191 aa17.46■□□□□ 0.39
Chd1-202ENSMUST00000024627 Aebp2Q9Z248 504 aaKnown RBP17.46■□□□□ 0.39
Chd1-202ENSMUST00000024627 Arid3cA6PWV5 409 aa17.46■□□□□ 0.39
Chd1-202ENSMUST00000024627 Ciz1Q8VEH2 845 aa17.46■□□□□ 0.39
Chd1-202ENSMUST00000024627 Znf330Q922H9 316 aa17.45■□□□□ 0.38
Chd1-202ENSMUST00000024627 Chrna2Q91X60 512 aa17.45■□□□□ 0.38
Retrieved 100 of 22,080 RNA–protein pairs in 43.5 ms