RNA–Protein interactions for RNA: ENSMUST00000004097.15

Cux1-201, Transcript of Homeobox protein cut-like 1, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Cux1, Length 12,862 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1-201ENSMUST00000004097 Eid3Q3V124 375 aa11.05□□□□□ -0.64
Cux1-201ENSMUST00000004097 Chic2Q9D9G3 165 aa11.03□□□□□ -0.64
Cux1-201ENSMUST00000004097 Arid4bA2CG63 1314 aaKnown RBP11.01□□□□□ -0.65
Cux1-201ENSMUST00000004097 Grwd1Q810D6 446 aaKnown RBP11.01□□□□□ -0.65
Cux1-201ENSMUST00000004097 1700019A02RikA0A087WPV9 146 aa11□□□□□ -0.65
Cux1-201ENSMUST00000004097 Kdm2aP59997 1161 aa10.98□□□□□ -0.65
Cux1-201ENSMUST00000004097 Isy1Q69ZQ2 285 aaKnown RBP10.98□□□□□ -0.65
Cux1-201ENSMUST00000004097 Ciz1Q8VEH2 845 aa10.98□□□□□ -0.65
Cux1-201ENSMUST00000004097 Noc3lQ8VI84 807 aaKnown RBP10.97□□□□□ -0.65
Cux1-201ENSMUST00000004097 Ccdc180J3QNE4 1664 aa10.97□□□□□ -0.65
Cux1-201ENSMUST00000004097 Exosc9Q9JHI7 438 aaKnown RBP10.95□□□□□ -0.66
Cux1-201ENSMUST00000004097 PnnO35691 725 aaKnown RBP10.92□□□□□ -0.66
Cux1-201ENSMUST00000004097 Plin1Q8CGN5 517 aa10.92□□□□□ -0.66
Cux1-201ENSMUST00000004097 Bcl11bQ99PV8 884 aa10.91□□□□□ -0.66
Cux1-201ENSMUST00000004097 Ripply1Q2WG77 201 aa10.91□□□□□ -0.66
Cux1-201ENSMUST00000004097 IqubQ8CDK3 788 aa10.91□□□□□ -0.66
Cux1-201ENSMUST00000004097 Mier1Q5UAK0 511 aa10.89□□□□□ -0.67
Cux1-201ENSMUST00000004097 Pes1Q9EQ61 584 aaKnown RBP10.88□□□□□ -0.67
Cux1-201ENSMUST00000004097 Stk24Q99KH8 431 aa10.88□□□□□ -0.67
Cux1-201ENSMUST00000004097 Sox12Q04890 314 aa10.86□□□□□ -0.67
Cux1-201ENSMUST00000004097 Arhgap27A2AB59 869 aa10.85□□□□□ -0.67
Cux1-201ENSMUST00000004097 Sh3bp5Q9Z131 463 aa10.84□□□□□ -0.67
Cux1-201ENSMUST00000004097 Gm6268A2A3U9 297 aa10.83□□□□□ -0.68
Cux1-201ENSMUST00000004097 PtmaP26350 111 aa10.83□□□□□ -0.68
Cux1-201ENSMUST00000004097 Vps53Q8CCB4 832 aa10.83□□□□□ -0.68
Cux1-201ENSMUST00000004097 Stag3O70576 1240 aa10.81□□□□□ -0.68
Cux1-201ENSMUST00000004097 Srpk2O54781 681 aaKnown RBP10.81□□□□□ -0.68
Cux1-201ENSMUST00000004097 Cnga1P29974 684 aa10.8□□□□□ -0.68
Cux1-201ENSMUST00000004097 Ncbp3Q8BZR9 615 aaKnown RBP10.8□□□□□ -0.68
Cux1-201ENSMUST00000004097 Apbb1Q9QXJ1 710 aa10.79□□□□□ -0.68
Cux1-201ENSMUST00000004097 Eif4g2Q62448 906 aaKnown RBP10.79□□□□□ -0.68
Cux1-201ENSMUST00000004097 Paf1Q8K2T8 535 aa10.78□□□□□ -0.68
Cux1-201ENSMUST00000004097 Rgl3Q3UYI5 709 aa10.78□□□□□ -0.68
Cux1-201ENSMUST00000004097 Tomm22Q9CPQ3 142 aa10.78□□□□□ -0.68
Cux1-201ENSMUST00000004097 Gm38655A0A286YDK6 273 aa10.78□□□□□ -0.68
Cux1-201ENSMUST00000004097 Anapc15P60007 132 aa10.78□□□□□ -0.68
Cux1-201ENSMUST00000004097 Gm20521D3Z5F7 333 aa10.77□□□□□ -0.69
Cux1-201ENSMUST00000004097 Rtl5Q5DTT4 599 aa10.77□□□□□ -0.69
Cux1-201ENSMUST00000004097 Tnnt1O88346 262 aa10.76□□□□□ -0.69
Cux1-201ENSMUST00000004097 Rtl1Q7M732 1744 aa10.75□□□□□ -0.69
Cux1-201ENSMUST00000004097 Neurod2Q62414 383 aa10.75□□□□□ -0.69
Cux1-201ENSMUST00000004097 Pip4k2bQ80XI4 416 aa10.74□□□□□ -0.69
Cux1-201ENSMUST00000004097 Clstn2Q9ER65 966 aa10.74□□□□□ -0.69
Cux1-201ENSMUST00000004097 Senp3Q9EP97 568 aaKnown RBP10.74□□□□□ -0.69
Cux1-201ENSMUST00000004097 Mroh3A0A1D5RM54 893 aa10.73□□□□□ -0.69
Cux1-201ENSMUST00000004097 Supt5hO55201 1082 aaKnown RBP10.73□□□□□ -0.69
Cux1-201ENSMUST00000004097 Fbln2P37889 1221 aa10.73□□□□□ -0.69
Cux1-201ENSMUST00000004097 Hs1bp3Q3TC93 395 aa10.73□□□□□ -0.69
Cux1-201ENSMUST00000004097 Rassf8Q8CJ96 419 aa10.73□□□□□ -0.69
Cux1-201ENSMUST00000004097 Nol10Q5RJG1 687 aaKnown RBP10.73□□□□□ -0.69
Cux1-201ENSMUST00000004097 Znf316Q6PGE4 1016 aa10.73□□□□□ -0.69
Cux1-201ENSMUST00000004097 Plcb2A3KGF7 1181 aa10.72□□□□□ -0.69
Cux1-201ENSMUST00000004097 Stk26Q99JT2 416 aa10.72□□□□□ -0.69
Cux1-201ENSMUST00000004097 AcrbpQ3V140 540 aa10.72□□□□□ -0.69
Cux1-201ENSMUST00000004097 Armcx1Q9CX83 456 aa10.72□□□□□ -0.69
Cux1-201ENSMUST00000004097 Psme1P97371 249 aa10.72□□□□□ -0.69
Cux1-201ENSMUST00000004097 Arid3cA6PWV5 409 aa10.71□□□□□ -0.69
Cux1-201ENSMUST00000004097 Kcnn1Q9EQR3 537 aa10.71□□□□□ -0.69
Cux1-201ENSMUST00000004097 Pak3Q61036 559 aa10.7□□□□□ -0.7
Cux1-201ENSMUST00000004097 Mapk8ip3Q9ESN9 1337 aa10.69□□□□□ -0.7
Cux1-201ENSMUST00000004097 Mical1Q8VDP3 1048 aa10.69□□□□□ -0.7
Cux1-201ENSMUST00000004097 Rrp7aQ9D1C9 280 aaKnown RBP10.69□□□□□ -0.7
Cux1-201ENSMUST00000004097 Ppp4r2Q0VGB7 417 aa10.69□□□□□ -0.7
Cux1-201ENSMUST00000004097 Pcgf6Q99NA9 353 aa10.69□□□□□ -0.7
Cux1-201ENSMUST00000004097 Klf15Q9EPW2 415 aa10.69□□□□□ -0.7
Cux1-201ENSMUST00000004097 HdgfP51859 237 aaKnown RBP10.68□□□□□ -0.7
Cux1-201ENSMUST00000004097 Trim30dE9PWL0 497 aa10.68□□□□□ -0.7
Cux1-201ENSMUST00000004097 U2surpQ6NV83 1029 aaKnown RBP10.67□□□□□ -0.7
Cux1-201ENSMUST00000004097 Ccar1Q8CH18 1146 aaKnown RBP10.67□□□□□ -0.7
Cux1-201ENSMUST00000004097 Clip1Q922J3 1391 aa10.67□□□□□ -0.7
Cux1-201ENSMUST00000004097 Txndc2Q6P902 515 aa10.65□□□□□ -0.7
Cux1-201ENSMUST00000004097 Rsph4aQ8BYM7 716 aa10.65□□□□□ -0.7
Cux1-201ENSMUST00000004097 Plagl1Q9JLQ4 704 aa10.65□□□□□ -0.7
Cux1-201ENSMUST00000004097 Hsp90ab1P11499 724 aaKnown RBP10.64□□□□□ -0.71
Cux1-201ENSMUST00000004097 Anp32aO35381 247 aa10.64□□□□□ -0.71
Cux1-201ENSMUST00000004097 Trim44Q9QXA7 346 aa10.64□□□□□ -0.71
Cux1-201ENSMUST00000004097 BccipQ9CWI3 316 aa10.63□□□□□ -0.71
Cux1-201ENSMUST00000004097 Rtf1A2AQ19 715 aaKnown RBP10.63□□□□□ -0.71
Cux1-201ENSMUST00000004097 Hsp90b1P08113 802 aaKnown RBP10.63□□□□□ -0.71
Cux1-201ENSMUST00000004097 Chmp3Q9CQ10 224 aa10.63□□□□□ -0.71
Cux1-201ENSMUST00000004097 Iqcf3Q9D498 203 aa10.63□□□□□ -0.71
Cux1-201ENSMUST00000004097 BlmO88700 1416 aa10.63□□□□□ -0.71
Cux1-201ENSMUST00000004097 MycnP03966 462 aaKnown RBP10.61□□□□□ -0.71
Cux1-201ENSMUST00000004097 Spryd3E9Q9B3 442 aa10.61□□□□□ -0.71
Cux1-201ENSMUST00000004097 Ppm1gQ61074 542 aa10.61□□□□□ -0.71
Cux1-201ENSMUST00000004097 Sugp2Q8CH09 1067 aa10.6□□□□□ -0.71
Cux1-201ENSMUST00000004097 Sf3b2Q3UJB0 878 aaKnown RBP10.6□□□□□ -0.71
Cux1-201ENSMUST00000004097 Dbr1Q923B1 550 aa10.6□□□□□ -0.71
Cux1-201ENSMUST00000004097 ArsiQ32KI9 573 aa10.59□□□□□ -0.71
Cux1-201ENSMUST00000004097 Dnai2A2AC93 623 aa10.59□□□□□ -0.71
Cux1-201ENSMUST00000004097 Taok2Q6ZQ29 1240 aa10.59□□□□□ -0.71
Cux1-201ENSMUST00000004097 Mrs2Q5NCE8 434 aa10.58□□□□□ -0.72
Cux1-201ENSMUST00000004097 Birc3O08863 600 aa10.57□□□□□ -0.72
Cux1-201ENSMUST00000004097 Pcmtd1P59913 357 aa10.57□□□□□ -0.72
Cux1-201ENSMUST00000004097 Mak16Q8BGS0 296 aaKnown RBP10.55□□□□□ -0.72
Cux1-201ENSMUST00000004097 AknaQ80VW7 1404 aa10.54□□□□□ -0.72
Cux1-201ENSMUST00000004097 ClspnQ80YR7 1315 aa10.54□□□□□ -0.72
Cux1-201ENSMUST00000004097 Ccdc96Q9CR92 584 aa10.54□□□□□ -0.72
Cux1-201ENSMUST00000004097 Arid4aF8VPQ2 1261 aaKnown RBP10.53□□□□□ -0.72
Cux1-201ENSMUST00000004097 Arid3aQ62431 601 aa10.53□□□□□ -0.72
Retrieved 100 of 22,080 RNA–protein pairs in 67.1 ms