RNA–Protein interactions for RNA: ENST00000585749.5

SDF2-203, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 823 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-203ENST00000585749 FOXA3P55318 350 aaPredicted RBP6.22□□□□□ -1.41
SDF2-203ENST00000585749 WDR73Q6P4I2 378 aa6.22□□□□□ -1.41
SDF2-203ENST00000585749 SMIM15Q7Z3B0 74 aa6.22□□□□□ -1.41
SDF2-203ENST00000585749 IMMP2LQ96T52 175 aa6.22□□□□□ -1.41
SDF2-203ENST00000585749 Q9UF83 564 aa6.22□□□□□ -1.41
SDF2-203ENST00000585749 RNF213Q63HN8 5207 aa6.21□□□□□ -1.42
SDF2-203ENST00000585749 SMIM27A0A1W2PRY6 76 aa6.21□□□□□ -1.42
SDF2-203ENST00000585749 SMIM17P0DL12 118 aa6.21□□□□□ -1.42
SDF2-203ENST00000585749 S100A1P23297 94 aa6.21□□□□□ -1.42
SDF2-203ENST00000585749 RAB4BP61018 213 aa6.21□□□□□ -1.42
SDF2-203ENST00000585749 RPL36AP83881 106 aaKnown RBP6.21□□□□□ -1.42
SDF2-203ENST00000585749 RIGQ13278 110 aa6.21□□□□□ -1.42
SDF2-203ENST00000585749 LYZL1Q6UWQ5 148 aa6.21□□□□□ -1.42
SDF2-203ENST00000585749 RPL36ALQ969Q0 106 aaKnown RBP6.21□□□□□ -1.42
SDF2-203ENST00000585749 BTF3L4Q96K17 158 aa6.21□□□□□ -1.42
SDF2-203ENST00000585749 PGLYRP4Q96LB8 373 aa6.21□□□□□ -1.42
SDF2-203ENST00000585749 AP1S3Q96PC3 154 aa6.21□□□□□ -1.42
SDF2-203ENST00000585749 TNFRSF18Q9Y5U5 241 aa6.21□□□□□ -1.42
SDF2-203ENST00000585749 DNAH8Q96JB1 4490 aa6.21□□□□□ -1.42
SDF2-203ENST00000585749 FAT3Q8TDW7 4589 aa6.2□□□□□ -1.42
SDF2-203ENST00000585749 TRBV7-3A0A075B6L6 115 aa6.2□□□□□ -1.42
SDF2-203ENST00000585749 A0A1B0GUT8 65 aa6.2□□□□□ -1.42
SDF2-203ENST00000585749 A0A1B0GW15 77 aa6.2□□□□□ -1.42
SDF2-203ENST00000585749 IBA57-AS1B1ANH7 110 aa6.2□□□□□ -1.42
SDF2-203ENST00000585749 S100A8P05109 93 aa6.2□□□□□ -1.42
SDF2-203ENST00000585749 TRGC1P0CF51 173 aa6.2□□□□□ -1.42
SDF2-203ENST00000585749 LAGE3Q14657 143 aa6.2□□□□□ -1.42
SDF2-203ENST00000585749 TWIST1Q15672 202 aa6.2□□□□□ -1.42
SDF2-203ENST00000585749 ZNF56Q15929 161 aa6.2□□□□□ -1.42
SDF2-203ENST00000585749 NUP35Q8NFH5 326 aa6.2□□□□□ -1.42
SDF2-203ENST00000585749 GTSF1Q8WW33 167 aa6.2□□□□□ -1.42
SDF2-203ENST00000585749 CNFNQ9BYD5 112 aa6.2□□□□□ -1.42
SDF2-203ENST00000585749 TRAV9-1A0A075B6T8 112 aa6.19□□□□□ -1.42
SDF2-203ENST00000585749 MUC21A0A0G2JKD1 596 aa6.19□□□□□ -1.42
SDF2-203ENST00000585749 MUC21A0A140T8X8 626 aa6.19□□□□□ -1.42
SDF2-203ENST00000585749 NTF3P20783 257 aa6.19□□□□□ -1.42
SDF2-203ENST00000585749 UBE2D3P61077 147 aa6.19□□□□□ -1.42
SDF2-203ENST00000585749 SSTP61278 116 aa6.19□□□□□ -1.42
SDF2-203ENST00000585749 UBE2D2P62837 147 aa6.19□□□□□ -1.42
SDF2-203ENST00000585749 KIF25-AS1Q9Y6Z4 181 aa6.19□□□□□ -1.42
SDF2-203ENST00000585749 A0A087WTM6 91 aa6.18□□□□□ -1.42
SDF2-203ENST00000585749 IGHV3-30P01768 117 aa6.18□□□□□ -1.42
SDF2-203ENST00000585749 IGHV3-33P01772 117 aa6.18□□□□□ -1.42
SDF2-203ENST00000585749 IGHV3-30-3P0DP02 117 aa6.18□□□□□ -1.42
SDF2-203ENST00000585749 IGHV3-30-5P0DP03 117 aa6.18□□□□□ -1.42
SDF2-203ENST00000585749 ATP5L2Q7Z4Y8 100 aa6.18□□□□□ -1.42
SDF2-203ENST00000585749 NEXN-AS1Q8NBZ9 246 aa6.18□□□□□ -1.42
SDF2-203ENST00000585749 CDIP1Q9H305 208 aa6.18□□□□□ -1.42
SDF2-203ENST00000585749 F5H697 171 aa6.17□□□□□ -1.42
SDF2-203ENST00000585749 ATP6V1G1O75348 118 aa6.17□□□□□ -1.42
SDF2-203ENST00000585749 GCSHP23434 173 aa6.17□□□□□ -1.42
SDF2-203ENST00000585749 HBBP68871 147 aa6.17□□□□□ -1.42
SDF2-203ENST00000585749 COX19Q49B96 90 aa6.17□□□□□ -1.42
SDF2-203ENST00000585749 RASL11AQ6T310 242 aa6.17□□□□□ -1.42
SDF2-203ENST00000585749 NIT1Q86X76 327 aa6.17□□□□□ -1.42
SDF2-203ENST00000585749 CHCHD7Q9BUK0 85 aa6.17□□□□□ -1.42
SDF2-203ENST00000585749 DPH3P1Q9H4G8 78 aa6.17□□□□□ -1.42
SDF2-203ENST00000585749 SMCO4Q9NRQ5 59 aa6.17□□□□□ -1.42
SDF2-203ENST00000585749 TRBV6-8A0A0A6YYG3 113 aa6.16□□□□□ -1.42
SDF2-203ENST00000585749 H7C1H1 209 aa6.16□□□□□ -1.42
SDF2-203ENST00000585749 MRPL54Q6P161 138 aaKnown RBP6.16□□□□□ -1.42
SDF2-203ENST00000585749 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.16□□□□□ -1.42
SDF2-203ENST00000585749 DEFB104AQ8WTQ1 72 aa6.16□□□□□ -1.42
SDF2-203ENST00000585749 TMEM191AQ9H0A3 160 aa6.16□□□□□ -1.42
SDF2-203ENST00000585749 Q9HAA7 133 aa6.16□□□□□ -1.42
SDF2-203ENST00000585749 URGCP-MRPS24S4R325 110 aa6.16□□□□□ -1.42
SDF2-203ENST00000585749 TRAV8-3A0A0A6YYJ7 113 aa6.15□□□□□ -1.42
SDF2-203ENST00000585749 M0QY20 66 aa6.15□□□□□ -1.42
SDF2-203ENST00000585749 PSCAO43653 123 aa6.15□□□□□ -1.42
SDF2-203ENST00000585749 MGPP08493 103 aa6.15□□□□□ -1.42
SDF2-203ENST00000585749 CAMPP49913 170 aa6.15□□□□□ -1.42
SDF2-203ENST00000585749 TMEM97Q5BJF2 176 aa6.15□□□□□ -1.42
SDF2-203ENST00000585749 DAZ4Q86SG3 579 aaKnown RBP6.15□□□□□ -1.42
SDF2-203ENST00000585749 DNAJC30Q96LL9 226 aa6.15□□□□□ -1.42
SDF2-203ENST00000585749 TMEM70Q9BUB7 260 aa6.15□□□□□ -1.42
SDF2-203ENST00000585749 TM2D2Q9BX73 214 aa6.15□□□□□ -1.42
SDF2-203ENST00000585749 KRTAP4-9Q9BYQ8 210 aa6.15□□□□□ -1.42
SDF2-203ENST00000585749 DAZ3Q9NR90 486 aaKnown RBP6.15□□□□□ -1.42
SDF2-203ENST00000585749 A0A087WX48 190 aa6.14□□□□□ -1.43
SDF2-203ENST00000585749 LRCOL1A6NCL2 159 aa6.14□□□□□ -1.43
SDF2-203ENST00000585749 PKIAP61925 76 aa6.14□□□□□ -1.43
SDF2-203ENST00000585749 SUMO4Q6EEV6 95 aa6.14□□□□□ -1.43
SDF2-203ENST00000585749 ATRAIDQ6UW56 229 aa6.14□□□□□ -1.43
SDF2-203ENST00000585749 TRBV24-1A0A075B6N3 115 aa6.13□□□□□ -1.43
SDF2-203ENST00000585749 A0A1B0GXF2 115 aa6.13□□□□□ -1.43
SDF2-203ENST00000585749 PPP1R17O96001 155 aa6.13□□□□□ -1.43
SDF2-203ENST00000585749 MT-ND6P03923 174 aa6.13□□□□□ -1.43
SDF2-203ENST00000585749 ELOBQ15370 118 aa6.13□□□□□ -1.43
SDF2-203ENST00000585749 COX11Q9Y6N1 276 aa6.13□□□□□ -1.43
SDF2-203ENST00000585749 HLA-DQA1P01909 254 aa6.12□□□□□ -1.43
SDF2-203ENST00000585749 FAM104BQ5XKR9 115 aa6.12□□□□□ -1.43
SDF2-203ENST00000585749 NTM-AS1Q6ZSK4 140 aa6.12□□□□□ -1.43
SDF2-203ENST00000585749 Q8N814 137 aa6.12□□□□□ -1.43
SDF2-203ENST00000585749 GATD1Q8NB37 220 aa6.12□□□□□ -1.43
SDF2-203ENST00000585749 NTN5Q8WTR8 489 aaPredicted RBP6.12□□□□□ -1.43
SDF2-203ENST00000585749 RMI2Q96E14 147 aa6.12□□□□□ -1.43
SDF2-203ENST00000585749 MRAP2Q96G30 205 aa6.12□□□□□ -1.43
SDF2-203ENST00000585749 GNB1LQ9BYB4 327 aa6.12□□□□□ -1.43
SDF2-203ENST00000585749 NIT2Q9NQR4 276 aa6.12□□□□□ -1.43
SDF2-203ENST00000585749 FAM30AQ9NZY2 134 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms