RNA–Protein interactions for RNA: ENSMUST00000139560.7

Ndc1-204, Transcript of Nucleoporin NDC1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ndc1, Length 4,584 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1-204ENSMUST00000139560 Trbv1A0A0B4J1G7 116 aa9.78□□□□□ -0.84
Ndc1-204ENSMUST00000139560 Gm2381G3UY53 305 aa9.78□□□□□ -0.84
Ndc1-204ENSMUST00000139560 Rpl27aP14115 148 aaKnown RBP9.78□□□□□ -0.84
Ndc1-204ENSMUST00000139560 Gm10842Q3U587 122 aa9.78□□□□□ -0.84
Ndc1-204ENSMUST00000139560 Khdc1aQ3UWR2 166 aa9.78□□□□□ -0.84
Ndc1-204ENSMUST00000139560 Gm10283Q8C3L5 117 aa9.78□□□□□ -0.84
Ndc1-204ENSMUST00000139560 Prok2Q9QXU7 128 aa9.78□□□□□ -0.84
Ndc1-204ENSMUST00000139560 Ighv14-2A0A075B5R7 117 aa9.78□□□□□ -0.84
Ndc1-204ENSMUST00000139560 Frrs1lB1AXV0 293 aa9.78□□□□□ -0.84
Ndc1-204ENSMUST00000139560 Iglc3P01845 104 aa9.78□□□□□ -0.84
Ndc1-204ENSMUST00000139560 Cd5P13379 494 aa9.78□□□□□ -0.84
Ndc1-204ENSMUST00000139560 Adam8Q05910 826 aa9.78□□□□□ -0.84
Ndc1-204ENSMUST00000139560 Olfr1178Q7TR20 323 aa9.78□□□□□ -0.84
Ndc1-204ENSMUST00000139560 Rbmxl2Q9DAE2 385 aaKnown RBP9.78□□□□□ -0.84
Ndc1-204ENSMUST00000139560 ThadaA8C756 1938 aa9.78□□□□□ -0.84
Ndc1-204ENSMUST00000139560 Ms4a12A0A087WSB9 263 aa9.77□□□□□ -0.84
Ndc1-204ENSMUST00000139560 Gm21719J3KMI9 230 aa9.77□□□□□ -0.84
Ndc1-204ENSMUST00000139560 Gm10447Q3UQ92 135 aa9.77□□□□□ -0.84
Ndc1-204ENSMUST00000139560 Trdv2-2Q5R1A4 116 aa9.77□□□□□ -0.84
Ndc1-204ENSMUST00000139560 Col11a1Q61245 1804 aa9.77□□□□□ -0.85
Ndc1-204ENSMUST00000139560 Trbv13-3A0A0B4J1H2 113 aa9.77□□□□□ -0.85
Ndc1-204ENSMUST00000139560 A0A1Y7VLU2 103 aa9.77□□□□□ -0.85
Ndc1-204ENSMUST00000139560 1700067P10RikG3X8U2 183 aa9.77□□□□□ -0.85
Ndc1-204ENSMUST00000139560 Gm21732J3QM79 361 aa9.77□□□□□ -0.85
Ndc1-204ENSMUST00000139560 Gm21921J3QNB5 361 aa9.77□□□□□ -0.85
Ndc1-204ENSMUST00000139560 P01788 123 aa9.77□□□□□ -0.85
Ndc1-204ENSMUST00000139560 Ms4a13Q5FWC3 203 aa9.77□□□□□ -0.85
Ndc1-204ENSMUST00000139560 Q8BTC1 67 aa9.77□□□□□ -0.85
Ndc1-204ENSMUST00000139560 Prr23a3Q9CWP9 254 aa9.77□□□□□ -0.85
Ndc1-204ENSMUST00000139560 Tex36Q9D5N9 219 aa9.77□□□□□ -0.85
Ndc1-204ENSMUST00000139560 Zfp236S4R299 1847 aa9.77□□□□□ -0.85
Ndc1-204ENSMUST00000139560 Fxyd7P59648 80 aa9.77□□□□□ -0.85
Ndc1-204ENSMUST00000139560 Tbr1Q64336 681 aa9.77□□□□□ -0.85
Ndc1-204ENSMUST00000139560 Prrg4Q8BGN6 226 aa9.77□□□□□ -0.85
Ndc1-204ENSMUST00000139560 Rasl11bQ922H7 247 aa9.77□□□□□ -0.85
Ndc1-204ENSMUST00000139560 Rabac1Q9Z0S9 185 aa9.77□□□□□ -0.85
Ndc1-204ENSMUST00000139560 Omt2bD3YX29 119 aa9.77□□□□□ -0.85
Ndc1-204ENSMUST00000139560 Olfr177E9Q7W1 309 aa9.77□□□□□ -0.85
Ndc1-204ENSMUST00000139560 Scgb1b19F6WYW0 93 aa9.77□□□□□ -0.85
Ndc1-204ENSMUST00000139560 Ccl6P27784 116 aa9.77□□□□□ -0.85
Ndc1-204ENSMUST00000139560 Efna2P52801 209 aa9.77□□□□□ -0.85
Ndc1-204ENSMUST00000139560 Csrp2P97314 193 aaKnown RBP9.77□□□□□ -0.85
Ndc1-204ENSMUST00000139560 Col9a1Q05722 921 aa9.77□□□□□ -0.85
Ndc1-204ENSMUST00000139560 Lyplal1Q3UFF7 239 aa9.77□□□□□ -0.85
Ndc1-204ENSMUST00000139560 Hist2h2beQ64524 126 aa9.77□□□□□ -0.85
Ndc1-204ENSMUST00000139560 Olfr982Q8VGB3 321 aa9.77□□□□□ -0.85
Ndc1-204ENSMUST00000139560 Mrps11Q9DCA2 191 aaKnown RBP9.77□□□□□ -0.85
Ndc1-204ENSMUST00000139560 PpyP10601 100 aa9.76□□□□□ -0.85
Ndc1-204ENSMUST00000139560 Timp3P39876 211 aa9.76□□□□□ -0.85
Ndc1-204ENSMUST00000139560 Trav3-3Q5R1C3 114 aa9.76□□□□□ -0.85
Ndc1-204ENSMUST00000139560 Vsig8Q6P3A4 417 aa9.76□□□□□ -0.85
Ndc1-204ENSMUST00000139560 EtdQ80SW5 59 aa9.76□□□□□ -0.85
Ndc1-204ENSMUST00000139560 D1Ertd622eQ8VEB3 207 aa9.76□□□□□ -0.85
Ndc1-204ENSMUST00000139560 Crim1Q9JLL0 1037 aa9.76□□□□□ -0.85
Ndc1-204ENSMUST00000139560 Pax1P09084 446 aa9.76□□□□□ -0.85
Ndc1-204ENSMUST00000139560 P18532 116 aa9.76□□□□□ -0.85
Ndc1-204ENSMUST00000139560 Olfr1350Q8VF34 308 aa9.76□□□□□ -0.85
Ndc1-204ENSMUST00000139560 Pappa2E9PZ87 1789 aa9.76□□□□□ -0.85
Ndc1-204ENSMUST00000139560 Gm16442D3YZG3 307 aa9.76□□□□□ -0.85
Ndc1-204ENSMUST00000139560 Spint5J3KMK8 105 aa9.76□□□□□ -0.85
Ndc1-204ENSMUST00000139560 P01634 136 aa9.76□□□□□ -0.85
Ndc1-204ENSMUST00000139560 S100a8P27005 89 aa9.76□□□□□ -0.85
Ndc1-204ENSMUST00000139560 Dnajc30P59041 219 aa9.76□□□□□ -0.85
Ndc1-204ENSMUST00000139560 Nr2c2apQ3TV70 140 aa9.76□□□□□ -0.85
Ndc1-204ENSMUST00000139560 Rbfox2Q8BP71 449 aaKnown RBP9.76□□□□□ -0.85
Ndc1-204ENSMUST00000139560 Siglec12Q91Y57 467 aa9.76□□□□□ -0.85
Ndc1-204ENSMUST00000139560 Spcs1Q9D958 161 aa9.76□□□□□ -0.85
Ndc1-204ENSMUST00000139560 Abca2P41234 2434 aa9.75□□□□□ -0.85
Ndc1-204ENSMUST00000139560 Ighv5-4A0A075B5P9 117 aa9.75□□□□□ -0.85
Ndc1-204ENSMUST00000139560 Gm20458E9PXJ7 78 aa9.75□□□□□ -0.85
Ndc1-204ENSMUST00000139560 SelenotP62342 195 aa9.75□□□□□ -0.85
Ndc1-204ENSMUST00000139560 Fam162bQ9CX19 157 aa9.75□□□□□ -0.85
Ndc1-204ENSMUST00000139560 PpbpQ9EQI5 113 aa9.75□□□□□ -0.85
Ndc1-204ENSMUST00000139560 Gm12888Q3UW77 119 aa9.75□□□□□ -0.85
Ndc1-204ENSMUST00000139560 Slc35d2Q762D5 326 aa9.75□□□□□ -0.85
Ndc1-204ENSMUST00000139560 Olfr25Q7TRD6 313 aa9.75□□□□□ -0.85
Ndc1-204ENSMUST00000139560 Tmem97Q8VD00 176 aa9.75□□□□□ -0.85
Ndc1-204ENSMUST00000139560 Olfr484Q8VFD3 321 aa9.75□□□□□ -0.85
Ndc1-204ENSMUST00000139560 Gm45844A0A1B0GRQ2 137 aa9.75□□□□□ -0.85
Ndc1-204ENSMUST00000139560 Esp23A8R0V5 104 aa9.75□□□□□ -0.85
Ndc1-204ENSMUST00000139560 Gm21900J3QP38 180 aa9.75□□□□□ -0.85
Ndc1-204ENSMUST00000139560 Il2raP01590 268 aa9.75□□□□□ -0.85
Ndc1-204ENSMUST00000139560 Atp5g2P56383 146 aa9.75□□□□□ -0.85
Ndc1-204ENSMUST00000139560 D630044L22RikQ8C701 164 aa9.75□□□□□ -0.85
Ndc1-204ENSMUST00000139560 Tmem126aQ9D8Y1 196 aa9.75□□□□□ -0.85
Ndc1-204ENSMUST00000139560 Rps2-ps6A0A140T8L5 221 aa9.75□□□□□ -0.85
Ndc1-204ENSMUST00000139560 P01759 136 aa9.75□□□□□ -0.85
Ndc1-204ENSMUST00000139560 Notch2O35516 2470 aa9.75□□□□□ -0.85
Ndc1-204ENSMUST00000139560 LctF8VPT3 1931 aa9.74□□□□□ -0.85
Ndc1-204ENSMUST00000139560 9830107B12RikD3Z5D6 160 aa9.74□□□□□ -0.85
Ndc1-204ENSMUST00000139560 Efnb3O35393 340 aa9.74□□□□□ -0.85
Ndc1-204ENSMUST00000139560 Wnt5bP22726 359 aa9.74□□□□□ -0.85
Ndc1-204ENSMUST00000139560 Gm10190Q8BSD7 107 aa9.74□□□□□ -0.85
Ndc1-204ENSMUST00000139560 Hils1Q9QYL0 170 aa9.74□□□□□ -0.85
Ndc1-204ENSMUST00000139560 PtprqP0C5E4 2300 aa9.74□□□□□ -0.85
Ndc1-204ENSMUST00000139560 Defa1P11477 93 aa9.74□□□□□ -0.85
Ndc1-204ENSMUST00000139560 Plxnb1Q8CJH3 2119 aa9.74□□□□□ -0.85
Ndc1-204ENSMUST00000139560 Bles03Q8VD62 251 aa9.74□□□□□ -0.85
Ndc1-204ENSMUST00000139560 H2afb1Q9CQ70 111 aa9.74□□□□□ -0.85
Ndc1-204ENSMUST00000139560 Tmem219Q9D123 240 aa9.74□□□□□ -0.85
Retrieved 100 of 22,080 RNA–protein pairs in 40.3 ms