RNA–Protein interactions for RNA: ENSMUST00000030992.12

Rnf4-201, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,895 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-201ENSMUST00000030992 Ptrh2Q8R2Y8 181 aaKnown RBP10.22□□□□□ -0.77
Rnf4-201ENSMUST00000030992 Olfr976Q8VF15 326 aa10.22□□□□□ -0.77
Rnf4-201ENSMUST00000030992 Olfr1441Q8VFV3 318 aa10.22□□□□□ -0.77
Rnf4-201ENSMUST00000030992 Olfr33Q8VGX7 318 aa10.22□□□□□ -0.77
Rnf4-201ENSMUST00000030992 Rbms1Q91W59 403 aaKnown RBP10.22□□□□□ -0.77
Rnf4-201ENSMUST00000030992 Rnf2Q9CQJ4 336 aa10.22□□□□□ -0.77
Rnf4-201ENSMUST00000030992 Oxld1Q9CR10 201 aa10.22□□□□□ -0.77
Rnf4-201ENSMUST00000030992 Pfdn5Q9WU28 154 aa10.22□□□□□ -0.77
Rnf4-201ENSMUST00000030992 Csmd1Q923L3 3564 aa10.22□□□□□ -0.77
Rnf4-201ENSMUST00000030992 Zzef1Q5SSH7 2924 aa10.22□□□□□ -0.77
Rnf4-201ENSMUST00000030992 Ighv6-3A0A075B5T2 118 aa10.21□□□□□ -0.77
Rnf4-201ENSMUST00000030992 Trav7n-5A0A075B604 112 aa10.21□□□□□ -0.77
Rnf4-201ENSMUST00000030992 Foxi3E0CZH3 425 aa10.21□□□□□ -0.77
Rnf4-201ENSMUST00000030992 Zfp708F8VPP0 541 aa10.21□□□□□ -0.77
Rnf4-201ENSMUST00000030992 Gm4791J3QQ14 102 aa10.21□□□□□ -0.77
Rnf4-201ENSMUST00000030992 IappP12968 93 aa10.21□□□□□ -0.77
Rnf4-201ENSMUST00000030992 GchfrP99025 84 aa10.21□□□□□ -0.77
Rnf4-201ENSMUST00000030992 Rhbdd2Q8VEK2 361 aa10.21□□□□□ -0.77
Rnf4-201ENSMUST00000030992 Trbv26A0A0B4J1P5 115 aa10.21□□□□□ -0.78
Rnf4-201ENSMUST00000030992 Gm5741B2RVA4 72 aa10.21□□□□□ -0.78
Rnf4-201ENSMUST00000030992 Spink11Q09TK7 88 aa10.21□□□□□ -0.78
Rnf4-201ENSMUST00000030992 Spata46Q4FZF2 204 aa10.21□□□□□ -0.78
Rnf4-201ENSMUST00000030992 Arl6ip6Q8BH07 226 aa10.21□□□□□ -0.78
Rnf4-201ENSMUST00000030992 Gm9958Q8C9U4 106 aa10.21□□□□□ -0.78
Rnf4-201ENSMUST00000030992 C1qtnf5Q8K479 243 aa10.21□□□□□ -0.78
Rnf4-201ENSMUST00000030992 RfxapQ8VCG9 231 aa10.21□□□□□ -0.78
Rnf4-201ENSMUST00000030992 Cisd1Q91WS0 108 aaKnown RBP10.21□□□□□ -0.78
Rnf4-201ENSMUST00000030992 Olfr19Q9JHB2 309 aa10.21□□□□□ -0.78
Rnf4-201ENSMUST00000030992 Ctnnbip1Q9JJN6 81 aa10.21□□□□□ -0.78
Rnf4-201ENSMUST00000030992 Ighv14-3A0A075B5R9 117 aa10.2□□□□□ -0.78
Rnf4-201ENSMUST00000030992 Igkv1-131A0A140T8M8 120 aa10.2□□□□□ -0.78
Rnf4-201ENSMUST00000030992 Olfr191L7N1Z8 309 aa10.2□□□□□ -0.78
Rnf4-201ENSMUST00000030992 Hoxa3P02831 443 aa10.2□□□□□ -0.78
Rnf4-201ENSMUST00000030992 RbpjP31266 526 aa10.2□□□□□ -0.78
Rnf4-201ENSMUST00000030992 Sumo1P63166 101 aaKnown RBP10.2□□□□□ -0.78
Rnf4-201ENSMUST00000030992 Dnd1Q6VY05 352 aa10.2□□□□□ -0.78
Rnf4-201ENSMUST00000030992 Ifna14Q810G3 189 aa10.2□□□□□ -0.78
Rnf4-201ENSMUST00000030992 Rgs13Q8K443 158 aa10.2□□□□□ -0.78
Rnf4-201ENSMUST00000030992 Olfr984Q8VFN1 314 aa10.2□□□□□ -0.78
Rnf4-201ENSMUST00000030992 Dopey1Q8BL99 2399 aa10.2□□□□□ -0.78
Rnf4-201ENSMUST00000030992 Gm42420A0A0J9YUQ2 99 aa10.2□□□□□ -0.78
Rnf4-201ENSMUST00000030992 9130204L05RikG3UWB8 92 aa10.2□□□□□ -0.78
Rnf4-201ENSMUST00000030992 Cox7a2P48771 83 aa10.2□□□□□ -0.78
Rnf4-201ENSMUST00000030992 Spem1Q5F289 310 aa10.2□□□□□ -0.78
Rnf4-201ENSMUST00000030992 Cd200r3Q5UKY4 296 aa10.2□□□□□ -0.78
Rnf4-201ENSMUST00000030992 Olfr963Q7TRA9 311 aa10.2□□□□□ -0.78
Rnf4-201ENSMUST00000030992 Ercc8Q8CFD5 397 aa10.2□□□□□ -0.78
Rnf4-201ENSMUST00000030992 Ttc32Q9DAC7 148 aa10.2□□□□□ -0.78
Rnf4-201ENSMUST00000030992 Cbln1Q9R171 193 aa10.2□□□□□ -0.78
Rnf4-201ENSMUST00000030992 Cacna1iE9Q7P2 2199 aa10.2□□□□□ -0.78
Rnf4-201ENSMUST00000030992 Smg1Q8BKX6 3658 aaKnown RBP10.2□□□□□ -0.78
Rnf4-201ENSMUST00000030992 Rnf5O35445 180 aa10.2□□□□□ -0.78
Rnf4-201ENSMUST00000030992 P03980 138 aa10.2□□□□□ -0.78
Rnf4-201ENSMUST00000030992 Lgals3P16110 264 aaKnown RBP10.2□□□□□ -0.78
Rnf4-201ENSMUST00000030992 SeboxP70368 190 aa10.2□□□□□ -0.78
Rnf4-201ENSMUST00000030992 Patz1Q5NBY9 687 aaKnown RBP10.2□□□□□ -0.78
Rnf4-201ENSMUST00000030992 Repin1Q5U4E2 545 aa10.2□□□□□ -0.78
Rnf4-201ENSMUST00000030992 OstcQ78XF5 149 aa10.2□□□□□ -0.78
Rnf4-201ENSMUST00000030992 Pygo2Q80V76 405 aa10.2□□□□□ -0.78
Rnf4-201ENSMUST00000030992 Olfr1454Q8VFW2 307 aa10.2□□□□□ -0.78
Rnf4-201ENSMUST00000030992 Pdlim4P70271 330 aa10.19□□□□□ -0.78
Rnf4-201ENSMUST00000030992 Usf2Q64705 346 aaKnown RBP10.19□□□□□ -0.78
Rnf4-201ENSMUST00000030992 Megf9Q8BH27 600 aa10.19□□□□□ -0.78
Rnf4-201ENSMUST00000030992 C130073F10RikQ8C4L8 201 aa10.19□□□□□ -0.78
Rnf4-201ENSMUST00000030992 Olfr816Q8VFU2 312 aa10.19□□□□□ -0.78
Rnf4-201ENSMUST00000030992 ChodlQ9CXM0 273 aa10.19□□□□□ -0.78
Rnf4-201ENSMUST00000030992 Fkbp11Q9D1M7 201 aa10.19□□□□□ -0.78
Rnf4-201ENSMUST00000030992 Osr1Q9WVG7 266 aa10.19□□□□□ -0.78
Rnf4-201ENSMUST00000030992 Lama5Q61001 3718 aa10.19□□□□□ -0.78
Rnf4-201ENSMUST00000030992 Ube2l3P68037 154 aaKnown RBP10.19□□□□□ -0.78
Rnf4-201ENSMUST00000030992 Trav15-1-dv6-1Q5R1D2 117 aa10.19□□□□□ -0.78
Rnf4-201ENSMUST00000030992 9130230L23RikQ8CC80 163 aa10.19□□□□□ -0.78
Rnf4-201ENSMUST00000030992 Rnase2aQ8K196 155 aa10.19□□□□□ -0.78
Rnf4-201ENSMUST00000030992 Olfr972Q9EQA2 314 aa10.19□□□□□ -0.78
Rnf4-201ENSMUST00000030992 Trav12d-3A0A075B6A4 115 aa10.18□□□□□ -0.78
Rnf4-201ENSMUST00000030992 Olfr748E9Q9Z0 307 aa10.18□□□□□ -0.78
Rnf4-201ENSMUST00000030992 Gm4133K9J7G6 307 aa10.18□□□□□ -0.78
Rnf4-201ENSMUST00000030992 Gfra1P97785 468 aa10.18□□□□□ -0.78
Rnf4-201ENSMUST00000030992 Dppa1Q810Y7 116 aa10.18□□□□□ -0.78
Rnf4-201ENSMUST00000030992 Gab2Q9Z1S8 665 aa10.18□□□□□ -0.78
Rnf4-201ENSMUST00000030992 Arhgef17Q80U35 2057 aa10.18□□□□□ -0.78
Rnf4-201ENSMUST00000030992 Olfr1116E9PXB8 307 aa10.18□□□□□ -0.78
Rnf4-201ENSMUST00000030992 1700003H04RikE9PXM2 192 aa10.18□□□□□ -0.78
Rnf4-201ENSMUST00000030992 Thap8E9Q695 213 aa10.18□□□□□ -0.78
Rnf4-201ENSMUST00000030992 BC100530Q497J0 97 aa10.18□□□□□ -0.78
Rnf4-201ENSMUST00000030992 Wipf2Q6PEV3 440 aa10.18□□□□□ -0.78
Rnf4-201ENSMUST00000030992 Olfr411Q7TRW8 315 aa10.18□□□□□ -0.78
Rnf4-201ENSMUST00000030992 Slc36a4Q8CH36 500 aa10.18□□□□□ -0.78
Rnf4-201ENSMUST00000030992 Cxcr6Q9EQ16 351 aa10.18□□□□□ -0.78
Rnf4-201ENSMUST00000030992 Rnase9P60154 184 aa10.17□□□□□ -0.78
Rnf4-201ENSMUST00000030992 Znf664Q4VA44 261 aa10.17□□□□□ -0.78
Rnf4-201ENSMUST00000030992 Fam216bQ8CC14 138 aa10.17□□□□□ -0.78
Rnf4-201ENSMUST00000030992 Pf4Q9Z126 105 aa10.17□□□□□ -0.78
Rnf4-201ENSMUST00000030992 Khdc1bP0C7A0 126 aa10.17□□□□□ -0.78
Rnf4-201ENSMUST00000030992 Ccl1P10146 92 aa10.17□□□□□ -0.78
Rnf4-201ENSMUST00000030992 Ppp1r3cQ7TMB3 317 aa10.17□□□□□ -0.78
Rnf4-201ENSMUST00000030992 Gm26566Q8CAC1 153 aa10.17□□□□□ -0.78
Rnf4-201ENSMUST00000030992 Ms4a6bQ99N09 244 aa10.17□□□□□ -0.78
Rnf4-201ENSMUST00000030992 Chchd1Q9CQA6 118 aa10.17□□□□□ -0.78
Rnf4-201ENSMUST00000030992 Ovol1Q9WTJ2 267 aa10.17□□□□□ -0.78
Retrieved 100 of 22,080 RNA–protein pairs in 124.6 ms