RNA–Protein interactions for RNA: ENST00000533011.5

CHMP4A-206, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-206ENST00000533011 AP1S3Q96PC3 154 aa6.87□□□□□ -1.31
CHMP4A-206ENST00000533011 MSRB1Q9NZV6 116 aa6.87□□□□□ -1.31
CHMP4A-206ENST00000533011 TNFRSF18Q9Y5U5 241 aa6.87□□□□□ -1.31
CHMP4A-206ENST00000533011 TRBV7-3A0A075B6L6 115 aa6.86□□□□□ -1.31
CHMP4A-206ENST00000533011 F5H697 171 aa6.86□□□□□ -1.31
CHMP4A-206ENST00000533011 CEBPGP53567 150 aa6.86□□□□□ -1.31
CHMP4A-206ENST00000533011 TEX261Q6UWH6 196 aa6.86□□□□□ -1.31
CHMP4A-206ENST00000533011 LYZL1Q6UWQ5 148 aa6.86□□□□□ -1.31
CHMP4A-206ENST00000533011 OR10G8Q8NGN5 311 aa6.86□□□□□ -1.31
CHMP4A-206ENST00000533011 RNASE7Q9H1E1 156 aaKnown RBP6.86□□□□□ -1.31
CHMP4A-206ENST00000533011 RPP21Q9H633 154 aaKnown RBP6.86□□□□□ -1.31
CHMP4A-206ENST00000533011 KIF25-AS1Q9Y6Z4 181 aa6.86□□□□□ -1.31
CHMP4A-206ENST00000533011 IBA57-AS1B1ANH7 110 aa6.85□□□□□ -1.31
CHMP4A-206ENST00000533011 UBE2D3P61077 147 aa6.85□□□□□ -1.31
CHMP4A-206ENST00000533011 UBE2D2P62837 147 aa6.85□□□□□ -1.31
CHMP4A-206ENST00000533011 LCE2DQ5TA82 110 aaPredicted RBP6.85□□□□□ -1.31
CHMP4A-206ENST00000533011 WDR73Q6P4I2 378 aa6.85□□□□□ -1.31
CHMP4A-206ENST00000533011 IGHV3-30P01768 117 aa6.84□□□□□ -1.31
CHMP4A-206ENST00000533011 IGHV3-33P01772 117 aa6.84□□□□□ -1.31
CHMP4A-206ENST00000533011 SRP19P09132 144 aaKnown RBP6.84□□□□□ -1.31
CHMP4A-206ENST00000533011 TRGC1P0CF51 173 aa6.84□□□□□ -1.31
CHMP4A-206ENST00000533011 IGHV3-30-3P0DP02 117 aa6.84□□□□□ -1.31
CHMP4A-206ENST00000533011 IGHV3-30-5P0DP03 117 aa6.84□□□□□ -1.31
CHMP4A-206ENST00000533011 NTF3P20783 257 aa6.84□□□□□ -1.31
CHMP4A-206ENST00000533011 CTRLP40313 264 aa6.84□□□□□ -1.31
CHMP4A-206ENST00000533011 FAM231DQ6ZW35 169 aa6.84□□□□□ -1.31
CHMP4A-206ENST00000533011 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.84□□□□□ -1.31
CHMP4A-206ENST00000533011 NEXN-AS1Q8NBZ9 246 aa6.84□□□□□ -1.31
CHMP4A-206ENST00000533011 SMIM7Q9BQ49 75 aa6.84□□□□□ -1.31
CHMP4A-206ENST00000533011 ZNF727A8MUV8 499 aa6.83□□□□□ -1.32
CHMP4A-206ENST00000533011 H7C1H1 209 aa6.83□□□□□ -1.32
CHMP4A-206ENST00000533011 GATCO43716 136 aaKnown RBP6.83□□□□□ -1.32
CHMP4A-206ENST00000533011 SMR3BP02814 79 aaPredicted RBP6.83□□□□□ -1.32
CHMP4A-206ENST00000533011 ERVFC1-1P60608 527 aa6.83□□□□□ -1.32
CHMP4A-206ENST00000533011 DEFB104AQ8WTQ1 72 aa6.83□□□□□ -1.32
CHMP4A-206ENST00000533011 CNFNQ9BYD5 112 aa6.83□□□□□ -1.32
CHMP4A-206ENST00000533011 A8MWL6 223 aa6.82□□□□□ -1.32
CHMP4A-206ENST00000533011 M0QY20 66 aa6.82□□□□□ -1.32
CHMP4A-206ENST00000533011 PLA2G1BP04054 148 aaKnown RBP6.82□□□□□ -1.32
CHMP4A-206ENST00000533011 MGPP08493 103 aa6.82□□□□□ -1.32
CHMP4A-206ENST00000533011 LAGE3Q14657 143 aa6.82□□□□□ -1.32
CHMP4A-206ENST00000533011 TWIST1Q15672 202 aa6.82□□□□□ -1.32
CHMP4A-206ENST00000533011 LINC01551Q86U37 167 aa6.82□□□□□ -1.32
CHMP4A-206ENST00000533011 GTSF1Q8WW33 167 aa6.82□□□□□ -1.32
CHMP4A-206ENST00000533011 DPH3P1Q9H4G8 78 aa6.82□□□□□ -1.32
CHMP4A-206ENST00000533011 URGCP-MRPS24S4R325 110 aa6.82□□□□□ -1.32
CHMP4A-206ENST00000533011 A0A087WTM6 91 aa6.81□□□□□ -1.32
CHMP4A-206ENST00000533011 TRBV6-8A0A0A6YYG3 113 aa6.81□□□□□ -1.32
CHMP4A-206ENST00000533011 PSCAO43653 123 aa6.81□□□□□ -1.32
CHMP4A-206ENST00000533011 FAM74A3Q4VXF1 159 aa6.81□□□□□ -1.32
CHMP4A-206ENST00000533011 TMEM97Q5BJF2 176 aa6.81□□□□□ -1.32
CHMP4A-206ENST00000533011 CT83Q5H943 113 aa6.81□□□□□ -1.32
CHMP4A-206ENST00000533011 DAZ4Q86SG3 579 aaKnown RBP6.81□□□□□ -1.32
CHMP4A-206ENST00000533011 NIT1Q86X76 327 aa6.81□□□□□ -1.32
CHMP4A-206ENST00000533011 Q8N3U1 123 aa6.81□□□□□ -1.32
CHMP4A-206ENST00000533011 DNAJC30Q96LL9 226 aa6.81□□□□□ -1.32
CHMP4A-206ENST00000533011 SMDT1Q9H4I9 107 aa6.81□□□□□ -1.32
CHMP4A-206ENST00000533011 Q9HAA7 133 aa6.81□□□□□ -1.32
CHMP4A-206ENST00000533011 DAZ3Q9NR90 486 aaKnown RBP6.81□□□□□ -1.32
CHMP4A-206ENST00000533011 A0A087WX48 190 aa6.8□□□□□ -1.32
CHMP4A-206ENST00000533011 TRAV8-3A0A0A6YYJ7 113 aa6.8□□□□□ -1.32
CHMP4A-206ENST00000533011 OXTP01178 125 aa6.8□□□□□ -1.32
CHMP4A-206ENST00000533011 FOXA3P55318 350 aaPredicted RBP6.8□□□□□ -1.32
CHMP4A-206ENST00000533011 PEA15Q15121 130 aa6.8□□□□□ -1.32
CHMP4A-206ENST00000533011 TMEM241Q24JQ0 296 aa6.8□□□□□ -1.32
CHMP4A-206ENST00000533011 SUMO4Q6EEV6 95 aa6.8□□□□□ -1.32
CHMP4A-206ENST00000533011 KCNIP4Q6PIL6 250 aa6.8□□□□□ -1.32
CHMP4A-206ENST00000533011 SMIM15Q7Z3B0 74 aa6.8□□□□□ -1.32
CHMP4A-206ENST00000533011 CHCHD7Q9BUK0 85 aa6.8□□□□□ -1.32
CHMP4A-206ENST00000533011 TM2D2Q9BX73 214 aa6.8□□□□□ -1.32
CHMP4A-206ENST00000533011 OSTCQ9NRP0 149 aa6.8□□□□□ -1.32
CHMP4A-206ENST00000533011 RNF213Q63HN8 5207 aa6.79□□□□□ -1.32
CHMP4A-206ENST00000533011 FAM231BA6NCW3 169 aa6.79□□□□□ -1.32
CHMP4A-206ENST00000533011 ELOBQ15370 118 aa6.79□□□□□ -1.32
CHMP4A-206ENST00000533011 RASL11AQ6T310 242 aa6.79□□□□□ -1.32
CHMP4A-206ENST00000533011 C15orf54Q8N8G6 183 aa6.79□□□□□ -1.32
CHMP4A-206ENST00000533011 BORCS7Q96B45 105 aa6.79□□□□□ -1.32
CHMP4A-206ENST00000533011 GFRA4Q9GZZ7 299 aa6.79□□□□□ -1.32
CHMP4A-206ENST00000533011 NIT2Q9NQR4 276 aa6.79□□□□□ -1.32
CHMP4A-206ENST00000533011 C9JQL5 133 aa6.78□□□□□ -1.32
CHMP4A-206ENST00000533011 TMEM262E9PQX1 116 aa6.78□□□□□ -1.32
CHMP4A-206ENST00000533011 KRTAP10-1P60331 282 aa6.78□□□□□ -1.32
CHMP4A-206ENST00000533011 PKIAP61925 76 aa6.78□□□□□ -1.32
CHMP4A-206ENST00000533011 SRSF3P84103 164 aaKnown RBP6.78□□□□□ -1.32
CHMP4A-206ENST00000533011 NTM-AS1Q6ZSK4 140 aa6.78□□□□□ -1.32
CHMP4A-206ENST00000533011 TSKUQ8WUA8 353 aa6.78□□□□□ -1.32
CHMP4A-206ENST00000533011 ISOC2Q96AB3 205 aa6.78□□□□□ -1.32
CHMP4A-206ENST00000533011 PGLYRP4Q96LB8 373 aa6.78□□□□□ -1.32
CHMP4A-206ENST00000533011 CHCHD5Q9BSY4 110 aa6.78□□□□□ -1.32
CHMP4A-206ENST00000533011 TMEM70Q9BUB7 260 aa6.78□□□□□ -1.32
CHMP4A-206ENST00000533011 NAT8Q9UHE5 227 aa6.78□□□□□ -1.32
CHMP4A-206ENST00000533011 KLK12Q9UKR0 248 aa6.78□□□□□ -1.32
CHMP4A-206ENST00000533011 TRBV25-1A0A075B6N4 114 aa6.77□□□□□ -1.33
CHMP4A-206ENST00000533011 HIGD1CA8MV81 97 aa6.77□□□□□ -1.33
CHMP4A-206ENST00000533011 GCSHP23434 173 aa6.77□□□□□ -1.33
CHMP4A-206ENST00000533011 RPL23P62829 140 aaKnown RBP6.77□□□□□ -1.33
CHMP4A-206ENST00000533011 RMI2Q96E14 147 aa6.77□□□□□ -1.33
CHMP4A-206ENST00000533011 COX11Q9Y6N1 276 aa6.77□□□□□ -1.33
CHMP4A-206ENST00000533011 A0A1B0GUT8 65 aa6.76□□□□□ -1.33
CHMP4A-206ENST00000533011 LRCOL1A6NCL2 159 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms