RNA–Protein interactions for RNA: ENST00000504751.5

TRAPPC13-206, Transcript of trafficking protein particle complex 13, humanhuman

TSL 4

Gene TRAPPC13, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-206ENST00000504751 FAM213BQ8TBF2 198 aa1.64□□□□□ -2.15
TRAPPC13-206ENST00000504751 MRPL35Q9NZE8 188 aaKnown RBP1.64□□□□□ -2.15
TRAPPC13-206ENST00000504751 BAZ1AQ9NRL2 1556 aaPredicted RBP1.64□□□□□ -2.15
TRAPPC13-206ENST00000504751 TNRC6BQ9UPQ9 1833 aaKnown RBP1.63□□□□□ -2.15
TRAPPC13-206ENST00000504751 TRAV12-3A0A0B4J271 114 aa1.63□□□□□ -2.15
TRAPPC13-206ENST00000504751 A0A0J9YY99 117 aa1.63□□□□□ -2.15
TRAPPC13-206ENST00000504751 NUPR2A6NF83 97 aa1.63□□□□□ -2.15
TRAPPC13-206ENST00000504751 A6NIN4 97 aa1.63□□□□□ -2.15
TRAPPC13-206ENST00000504751 H3BRM9 83 aa1.63□□□□□ -2.15
TRAPPC13-206ENST00000504751 SSSCA1O60232 199 aa1.63□□□□□ -2.15
TRAPPC13-206ENST00000504751 LINC00032P0C843 101 aa1.63□□□□□ -2.15
TRAPPC13-206ENST00000504751 KRTAP4-1Q9BYQ7 146 aa1.63□□□□□ -2.15
TRAPPC13-206ENST00000504751 CYSTM1Q9H1C7 97 aa1.63□□□□□ -2.15
TRAPPC13-206ENST00000504751 C22orf24Q9Y442 160 aa1.63□□□□□ -2.15
TRAPPC13-206ENST00000504751 NSD3Q9BZ95 1437 aa1.63□□□□□ -2.15
TRAPPC13-206ENST00000504751 CHD1O14646 1710 aa1.63□□□□□ -2.15
TRAPPC13-206ENST00000504751 TNS1Q9HBL0 1735 aaKnown RBP1.63□□□□□ -2.15
TRAPPC13-206ENST00000504751 GOLGA3Q08378 1498 aa1.63□□□□□ -2.15
TRAPPC13-206ENST00000504751 PLEKHH2Q8IVE3 1493 aa1.63□□□□□ -2.15
TRAPPC13-206ENST00000504751 IFT140Q96RY7 1462 aa1.63□□□□□ -2.15
TRAPPC13-206ENST00000504751 ARHGAP35Q9NRY4 1499 aa1.63□□□□□ -2.15
TRAPPC13-206ENST00000504751 SHROOM2Q13796 1616 aa1.62□□□□□ -2.15
TRAPPC13-206ENST00000504751 ANKRD36BQ8N2N9 1353 aa1.62□□□□□ -2.15
TRAPPC13-206ENST00000504751 TET3O43151 1660 aa1.62□□□□□ -2.15
TRAPPC13-206ENST00000504751 TRAV13-2A0A0B4J235 113 aa1.62□□□□□ -2.15
TRAPPC13-206ENST00000504751 H3BQ15 152 aa1.62□□□□□ -2.15
TRAPPC13-206ENST00000504751 H3BQF6 201 aa1.62□□□□□ -2.15
TRAPPC13-206ENST00000504751 NUPR1O60356 82 aa1.62□□□□□ -2.15
TRAPPC13-206ENST00000504751 MRPS14O60783 128 aaKnown RBP1.62□□□□□ -2.15
TRAPPC13-206ENST00000504751 PPYP01298 95 aa1.62□□□□□ -2.15
TRAPPC13-206ENST00000504751 TDRG1Q3Y452 100 aa1.62□□□□□ -2.15
TRAPPC13-206ENST00000504751 FAM74A1Q5RGS3 127 aa1.62□□□□□ -2.15
TRAPPC13-206ENST00000504751 C4orf3Q8WVX3 66 aa1.62□□□□□ -2.15
TRAPPC13-206ENST00000504751 PMCHL2Q9BQD1 86 aa1.62□□□□□ -2.15
TRAPPC13-206ENST00000504751 WFDC10AQ9H1F0 79 aa1.62□□□□□ -2.15
TRAPPC13-206ENST00000504751 AP4S1Q9Y587 144 aa1.62□□□□□ -2.15
TRAPPC13-206ENST00000504751 NWD2Q9ULI1 1742 aa1.61□□□□□ -2.15
TRAPPC13-206ENST00000504751 TRBV10-1A0A0K0K1A3 114 aa1.61□□□□□ -2.15
TRAPPC13-206ENST00000504751 TRBV6-5A0A0K0K1A5 114 aa1.61□□□□□ -2.15
TRAPPC13-206ENST00000504751 TRBV10-3A0A0K0K1G6 114 aa1.61□□□□□ -2.15
TRAPPC13-206ENST00000504751 TEX49A0A1B0GTD5 131 aa1.61□□□□□ -2.15
TRAPPC13-206ENST00000504751 CLPSL1A2RUU4 121 aa1.61□□□□□ -2.15
TRAPPC13-206ENST00000504751 NMBP08949 121 aa1.61□□□□□ -2.15
TRAPPC13-206ENST00000504751 GNG11P61952 73 aa1.61□□□□□ -2.15
TRAPPC13-206ENST00000504751 C20orf78Q9BR46 151 aa1.61□□□□□ -2.15
TRAPPC13-206ENST00000504751 CCDC18Q5T9S5 1454 aa1.61□□□□□ -2.15
TRAPPC13-206ENST00000504751 CDK12Q9NYV4 1490 aaPredicted RBP1.61□□□□□ -2.15
TRAPPC13-206ENST00000504751 TOPAZ1Q8N9V7 1692 aa1.61□□□□□ -2.15
TRAPPC13-206ENST00000504751 PLXNA1Q9UIW2 1896 aa1.6□□□□□ -2.15
TRAPPC13-206ENST00000504751 DLEC1Q9Y238 1755 aa1.6□□□□□ -2.15
TRAPPC13-206ENST00000504751 DAPK1P53355 1430 aa1.6□□□□□ -2.15
TRAPPC13-206ENST00000504751 LOC101927531A0A1B0GV80 90 aa1.6□□□□□ -2.15
TRAPPC13-206ENST00000504751 SIX6O95475 246 aa1.6□□□□□ -2.15
TRAPPC13-206ENST00000504751 IGHV3-30P01768 117 aa1.6□□□□□ -2.15
TRAPPC13-206ENST00000504751 IGHV3-30-5P0DP03 117 aa1.6□□□□□ -2.15
TRAPPC13-206ENST00000504751 PDE6GP18545 87 aa1.6□□□□□ -2.15
TRAPPC13-206ENST00000504751 UBE2D1P51668 147 aa1.6□□□□□ -2.15
TRAPPC13-206ENST00000504751 ATP5EP56381 51 aaPredicted RBP1.6□□□□□ -2.15
TRAPPC13-206ENST00000504751 CCL8P80075 99 aa1.6□□□□□ -2.15
TRAPPC13-206ENST00000504751 KLK9Q9UKQ9 250 aa1.6□□□□□ -2.15
TRAPPC13-206ENST00000504751 MON2Q7Z3U7 1717 aa1.6□□□□□ -2.15
TRAPPC13-206ENST00000504751 NRXN2Q9P2S2 1712 aa1.6□□□□□ -2.15
TRAPPC13-206ENST00000504751 RGPD4Q7Z3J3 1758 aa1.59□□□□□ -2.15
TRAPPC13-206ENST00000504751 AFDNP55196 1824 aaKnown RBP1.59□□□□□ -2.15
TRAPPC13-206ENST00000504751 GAPVD1Q14C86 1478 aa1.59□□□□□ -2.15
TRAPPC13-206ENST00000504751 FYCO1Q9BQS8 1478 aa1.59□□□□□ -2.15
TRAPPC13-206ENST00000504751 TRAV23DV6A0A075B6W5 121 aa1.59□□□□□ -2.15
TRAPPC13-206ENST00000504751 JMJD7-PLA2G4BH0Y9G9 81 aa1.59□□□□□ -2.15
TRAPPC13-206ENST00000504751 DNAL4O96015 105 aa1.59□□□□□ -2.15
TRAPPC13-206ENST00000504751 ANGP03950 147 aaKnown RBP1.59□□□□□ -2.15
TRAPPC13-206ENST00000504751 LYNX1P0DP58 116 aa1.59□□□□□ -2.15
TRAPPC13-206ENST00000504751 IL9P15248 144 aa1.59□□□□□ -2.15
TRAPPC13-206ENST00000504751 LCN9Q8WX39 176 aa1.59□□□□□ -2.15
TRAPPC13-206ENST00000504751 DMAC1Q96GE9 116 aa1.59□□□□□ -2.15
TRAPPC13-206ENST00000504751 BET1LQ9NYM9 111 aa1.59□□□□□ -2.15
TRAPPC13-206ENST00000504751 RGPD3A6NKT7 1758 aaPredicted RBP1.58□□□□□ -2.16
TRAPPC13-206ENST00000504751 ARL14EPLP0DKL9 152 aa1.58□□□□□ -2.16
TRAPPC13-206ENST00000504751 FAUP35544 74 aaKnown RBP1.58□□□□□ -2.16
TRAPPC13-206ENST00000504751 SEC11AP67812 179 aa1.58□□□□□ -2.16
TRAPPC13-206ENST00000504751 C10orf128Q5T292 105 aa1.58□□□□□ -2.16
TRAPPC13-206ENST00000504751 BPESC1Q9GZL8 116 aa1.58□□□□□ -2.16
TRAPPC13-206ENST00000504751 PI4KAP42356 2102 aa1.58□□□□□ -2.16
TRAPPC13-206ENST00000504751 PHRF1Q9P1Y6 1649 aaKnown RBP1.58□□□□□ -2.16
TRAPPC13-206ENST00000504751 TENM1Q9UKZ4 2725 aa1.58□□□□□ -2.16
TRAPPC13-206ENST00000504751 ZNF142P52746 1687 aaPredicted RBP1.58□□□□□ -2.16
TRAPPC13-206ENST00000504751 COL4A6Q14031 1691 aa1.58□□□□□ -2.16
TRAPPC13-206ENST00000504751 MARF1Q9Y4F3 1742 aaKnown RBP1.57□□□□□ -2.16
TRAPPC13-206ENST00000504751 LAMC3Q9Y6N6 1575 aa1.57□□□□□ -2.16
TRAPPC13-206ENST00000504751 PIGBOS1A0A0B4J2F0 54 aa1.57□□□□□ -2.16
TRAPPC13-206ENST00000504751 C10orf142B7Z368 130 aa1.57□□□□□ -2.16
TRAPPC13-206ENST00000504751 K7EP34 96 aa1.57□□□□□ -2.16
TRAPPC13-206ENST00000504751 KRTAP10-4P60372 401 aaPredicted RBP1.57□□□□□ -2.16
TRAPPC13-206ENST00000504751 MPV17LQ2QL34 196 aa1.57□□□□□ -2.16
TRAPPC13-206ENST00000504751 LINC00299Q6ZSB3 139 aa1.57□□□□□ -2.16
TRAPPC13-206ENST00000504751 NDUFA11Q86Y39 141 aa1.57□□□□□ -2.16
TRAPPC13-206ENST00000504751 MYOZ3Q8TDC0 251 aa1.57□□□□□ -2.16
TRAPPC13-206ENST00000504751 CYP4F30PQ9H0H9 118 aa1.57□□□□□ -2.16
TRAPPC13-206ENST00000504751 FCGBPQ9Y6R7 5405 aaPredicted RBP1.57□□□□□ -2.16
TRAPPC13-206ENST00000504751 SHANK2Q9UPX8 1470 aa1.56□□□□□ -2.16
TRAPPC13-206ENST00000504751 PRDM15P57071 1507 aaPredicted RBP1.56□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms