RNA–Protein interactions for RNA: ENST00000504751.5

TRAPPC13-206, Transcript of trafficking protein particle complex 13, humanhuman

TSL 4

Gene TRAPPC13, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-206ENST00000504751 AEBP2Q6ZN18 517 aaPredicted RBP26.63■■□□□ 1.85
TRAPPC13-206ENST00000504751 CHIC1Q5VXU3 224 aa26.32■■□□□ 1.8
TRAPPC13-206ENST00000504751 PHF23Q9BUL5 403 aaPredicted RBP23.21■■□□□ 1.31
TRAPPC13-206ENST00000504751 SENP3Q9H4L4 574 aaPredicted RBP22.49■■□□□ 1.19
TRAPPC13-206ENST00000504751 PLPPR3Q6T4P5 718 aa21.5■■□□□ 1.03
TRAPPC13-206ENST00000504751 FOXD1Q16676 465 aa20.85■□□□□ 0.93
TRAPPC13-206ENST00000504751 PPP6R1Q9UPN7 881 aa20.35■□□□□ 0.85
TRAPPC13-206ENST00000504751 ADRA2BP18089 450 aa20.33■□□□□ 0.85
TRAPPC13-206ENST00000504751 PIAS4Q8N2W9 510 aaPredicted RBP19.73■□□□□ 0.75
TRAPPC13-206ENST00000504751 MSH5O43196 834 aa19.05■□□□□ 0.64
TRAPPC13-206ENST00000504751 KCNA4P22459 653 aa19■□□□□ 0.63
TRAPPC13-206ENST00000504751 PPP4R3CPQ6ZMV5 832 aa19■□□□□ 0.63
TRAPPC13-206ENST00000504751 NCBP3Q53F19 620 aaKnown RBP18.57■□□□□ 0.56
TRAPPC13-206ENST00000504751 SCAF1Q9H7N4 1312 aaKnown RBP18.53■□□□□ 0.56
TRAPPC13-206ENST00000504751 CNKSR2Q8WXI2 1034 aa18.38■□□□□ 0.53
TRAPPC13-206ENST00000504751 NPM3O75607 178 aaKnown RBP18.36■□□□□ 0.53
TRAPPC13-206ENST00000504751 MAPK8IP2Q13387 824 aaPredicted RBP18.34■□□□□ 0.53
TRAPPC13-206ENST00000504751 SLC4A1APQ9BWU0 796 aaKnown RBP18.12■□□□□ 0.49
TRAPPC13-206ENST00000504751 EHMT2Q96KQ7 1210 aa18.03■□□□□ 0.48
TRAPPC13-206ENST00000504751 DMRT2Q9Y5R5 561 aa18.03■□□□□ 0.48
TRAPPC13-206ENST00000504751 RNF216Q9NWF9 866 aaPredicted RBP17.95■□□□□ 0.46
TRAPPC13-206ENST00000504751 DNAJC5BQ9UF47 199 aa17.82■□□□□ 0.44
TRAPPC13-206ENST00000504751 HOXD11P31277 338 aaPredicted RBP17.81■□□□□ 0.44
TRAPPC13-206ENST00000504751 CSRNP3Q8WYN3 585 aa17.68■□□□□ 0.42
TRAPPC13-206ENST00000504751 ZBTB22O15209 634 aa17.54■□□□□ 0.4
TRAPPC13-206ENST00000504751 FOXD4L1Q9NU39 408 aa17.36■□□□□ 0.37
TRAPPC13-206ENST00000504751 SLC4A2P04920 1241 aa17.27■□□□□ 0.36
TRAPPC13-206ENST00000504751 DCAF8L1A6NGE4 600 aa17.14■□□□□ 0.33
TRAPPC13-206ENST00000504751 MYCNP04198 464 aaPredicted RBP16.94■□□□□ 0.3
TRAPPC13-206ENST00000504751 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.9■□□□□ 0.3
TRAPPC13-206ENST00000504751 POTEDQ86YR6 584 aa16.74■□□□□ 0.27
TRAPPC13-206ENST00000504751 U3KPZ7 1027 aaPredicted RBP16.74■□□□□ 0.27
TRAPPC13-206ENST00000504751 ATXN8OSP0DMR3 200 aa16.72■□□□□ 0.27
TRAPPC13-206ENST00000504751 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.58■□□□□ 0.24
TRAPPC13-206ENST00000504751 HNRNPUL2Q1KMD3 747 aaKnown RBP16.58■□□□□ 0.24
TRAPPC13-206ENST00000504751 SAMD1Q6SPF0 538 aaPredicted RBP16.56■□□□□ 0.24
TRAPPC13-206ENST00000504751 ATF5Q9Y2D1 282 aaPredicted RBP16.49■□□□□ 0.23
TRAPPC13-206ENST00000504751 RNF39Q9H2S5 420 aa16.4■□□□□ 0.22
TRAPPC13-206ENST00000504751 APLP2Q06481 763 aa16.3■□□□□ 0.2
TRAPPC13-206ENST00000504751 C1QBPQ07021 282 aaKnown RBP16.19■□□□□ 0.18
TRAPPC13-206ENST00000504751 ZNF219Q9P2Y4 722 aaPredicted RBP16.16■□□□□ 0.18
TRAPPC13-206ENST00000504751 SPINK5Q9NQ38 1064 aaPredicted RBP16.15■□□□□ 0.18
TRAPPC13-206ENST00000504751 TRHP20396 242 aaPredicted RBP16.02■□□□□ 0.16
TRAPPC13-206ENST00000504751 CAPN15O75808 1086 aa16.01■□□□□ 0.15
TRAPPC13-206ENST00000504751 FKBP8Q14318 412 aa15.92■□□□□ 0.14
TRAPPC13-206ENST00000504751 POLA2Q14181 598 aa15.87■□□□□ 0.13
TRAPPC13-206ENST00000504751 MKRN4PQ13434 485 aaPredicted RBP15.81■□□□□ 0.12
TRAPPC13-206ENST00000504751 ABCB7O75027 752 aa15.77■□□□□ 0.12
TRAPPC13-206ENST00000504751 DSG3P32926 999 aa15.71■□□□□ 0.11
TRAPPC13-206ENST00000504751 FBLN2P98095 1184 aa15.7■□□□□ 0.1
TRAPPC13-206ENST00000504751 CACNB1Q02641 598 aaPredicted RBP15.64■□□□□ 0.09
TRAPPC13-206ENST00000504751 ZBTB12Q9Y330 459 aaPredicted RBP15.63■□□□□ 0.09
TRAPPC13-206ENST00000504751 SPDYE4A6NLX3 237 aa15.57■□□□□ 0.08
TRAPPC13-206ENST00000504751 PROM2Q8N271 834 aa15.45■□□□□ 0.06
TRAPPC13-206ENST00000504751 OSCARQ8IYS5 282 aa15.36■□□□□ 0.05
TRAPPC13-206ENST00000504751 SPDYE2BA6NHP3 402 aa15.25■□□□□ 0.03
TRAPPC13-206ENST00000504751 SPDYE6P0CI01 402 aa15.25■□□□□ 0.03
TRAPPC13-206ENST00000504751 SPDYE2Q495Y8 402 aa15.25■□□□□ 0.03
TRAPPC13-206ENST00000504751 FBXO3Q9UK99 471 aa15.23■□□□□ 0.03
TRAPPC13-206ENST00000504751 SSUH2Q9Y2M2 353 aa15.22■□□□□ 0.03
TRAPPC13-206ENST00000504751 ZNF692Q9BU19 519 aaPredicted RBP15.21■□□□□ 0.03
TRAPPC13-206ENST00000504751 RTN4Q9NQC3 1192 aaKnown RBP15.16■□□□□ 0.02
TRAPPC13-206ENST00000504751 AMER1Q5JTC6 1135 aaPredicted RBP15.14■□□□□ 0.01
TRAPPC13-206ENST00000504751 VASPP50552 380 aaPredicted RBP15.07■□□□□ 0
TRAPPC13-206ENST00000504751 PABPN1Q86U42 306 aaKnown RBP eCLIP15.05■□□□□ -0
TRAPPC13-206ENST00000504751 RBM42Q9BTD8 480 aaKnown RBP14.92□□□□□ -0.02
TRAPPC13-206ENST00000504751 IFNLR1Q8IU57 520 aaPredicted RBP14.9□□□□□ -0.02
TRAPPC13-206ENST00000504751 STAG3Q9UJ98 1225 aa14.89□□□□□ -0.03
TRAPPC13-206ENST00000504751 AKT1S1Q96B36 256 aa14.83□□□□□ -0.04
TRAPPC13-206ENST00000504751 REM2Q8IYK8 340 aaPredicted RBP14.71□□□□□ -0.05
TRAPPC13-206ENST00000504751 PLCD3Q8N3E9 789 aa14.71□□□□□ -0.05
TRAPPC13-206ENST00000504751 SPDYE1Q8NFV5 336 aaPredicted RBP14.7□□□□□ -0.06
TRAPPC13-206ENST00000504751 MIER1Q8N108 512 aa14.67□□□□□ -0.06
TRAPPC13-206ENST00000504751 KLHL34Q8N239 644 aa14.64□□□□□ -0.07
TRAPPC13-206ENST00000504751 SPOCK2Q92563 424 aa14.62□□□□□ -0.07
TRAPPC13-206ENST00000504751 CLEC11AQ9Y240 323 aa14.58□□□□□ -0.08
TRAPPC13-206ENST00000504751 PITPNM1O00562 1244 aa14.55□□□□□ -0.08
TRAPPC13-206ENST00000504751 PKD2Q13563 968 aa14.55□□□□□ -0.08
TRAPPC13-206ENST00000504751 PLEKHG5O94827 1062 aa14.54□□□□□ -0.08
TRAPPC13-206ENST00000504751 ZBTB47Q9UFB7 747 aaPredicted RBP14.52□□□□□ -0.09
TRAPPC13-206ENST00000504751 PRR29P0C7W0 189 aa14.51□□□□□ -0.09
TRAPPC13-206ENST00000504751 CREBZFQ9NS37 354 aa14.47□□□□□ -0.09
TRAPPC13-206ENST00000504751 MNX1P50219 401 aaPredicted RBP14.4□□□□□ -0.1
TRAPPC13-206ENST00000504751 ECM2O94769 699 aaPredicted RBP14.34□□□□□ -0.11
TRAPPC13-206ENST00000504751 NUBP1P53384 320 aa14.34□□□□□ -0.11
TRAPPC13-206ENST00000504751 CIZ1Q9ULV3 898 aaPredicted RBP14.3□□□□□ -0.12
TRAPPC13-206ENST00000504751 SLC24A1O60721 1099 aa14.25□□□□□ -0.13
TRAPPC13-206ENST00000504751 DCAF8L2P0C7V8 631 aa14.24□□□□□ -0.13
TRAPPC13-206ENST00000504751 RGL2O15211 777 aa14.23□□□□□ -0.13
TRAPPC13-206ENST00000504751 CHADLQ6NUI6 762 aa14.23□□□□□ -0.13
TRAPPC13-206ENST00000504751 GSE1Q14687 1217 aa14.22□□□□□ -0.13
TRAPPC13-206ENST00000504751 RASEFQ8IZ41 740 aa14.21□□□□□ -0.13
TRAPPC13-206ENST00000504751 TRIM41Q8WV44 630 aa14.21□□□□□ -0.13
TRAPPC13-206ENST00000504751 FXR2P51116 673 aaKnown RBP eCLIP14.19□□□□□ -0.14
TRAPPC13-206ENST00000504751 CHRDL2Q6WN34 429 aa14.19□□□□□ -0.14
TRAPPC13-206ENST00000504751 FAM212AQ96EL1 285 aa14.18□□□□□ -0.14
TRAPPC13-206ENST00000504751 NPM1P06748 294 aaKnown RBP eCLIP14.17□□□□□ -0.14
TRAPPC13-206ENST00000504751 PRKAR2AP13861 404 aaKnown RBP14.15□□□□□ -0.14
TRAPPC13-206ENST00000504751 DCAF8Q5TAQ9 597 aa14.15□□□□□ -0.14
TRAPPC13-206ENST00000504751 FARP1Q9Y4F1 1045 aaPredicted RBP14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms