RNA–Protein interactions for RNA: ENST00000499038.2

UBE2B-202, Transcript of ubiquitin conjugating enzyme E2 B, humanhuman

TSL 3

Gene UBE2B, Length 682 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2B-202ENST00000499038 FOCADQ5VW36 1801 aa0.31□□□□□ -2.36
UBE2B-202ENST00000499038 PHIPQ8WWQ0 1821 aa0.31□□□□□ -2.36
UBE2B-202ENST00000499038 TANC1Q9C0D5 1861 aa0.31□□□□□ -2.36
UBE2B-202ENST00000499038 IFT140Q96RY7 1462 aa0.31□□□□□ -2.36
UBE2B-202ENST00000499038 TNS1Q9HBL0 1735 aaKnown RBP0.31□□□□□ -2.36
UBE2B-202ENST00000499038 GVQW2A0A096LPI5 108 aaPredicted RBP0.31□□□□□ -2.36
UBE2B-202ENST00000499038 PIGBOS1A0A0B4J2F0 54 aa0.31□□□□□ -2.36
UBE2B-202ENST00000499038 LOC100130705A0A1B0GUX0 176 aa0.31□□□□□ -2.36
UBE2B-202ENST00000499038 A0A1B0GV90 55 aa0.31□□□□□ -2.36
UBE2B-202ENST00000499038 ACYP2P14621 99 aa0.31□□□□□ -2.36
UBE2B-202ENST00000499038 FGF7P21781 194 aa0.31□□□□□ -2.36
UBE2B-202ENST00000499038 CCL8P80075 99 aa0.31□□□□□ -2.36
UBE2B-202ENST00000499038 KRTAP21-1Q3LI58 79 aa0.31□□□□□ -2.36
UBE2B-202ENST00000499038 C12orf73Q69YU5 71 aa0.31□□□□□ -2.36
UBE2B-202ENST00000499038 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.31□□□□□ -2.36
UBE2B-202ENST00000499038 Q96NJ1 140 aa0.31□□□□□ -2.36
UBE2B-202ENST00000499038 PRR15LQ9BU68 103 aa0.31□□□□□ -2.36
UBE2B-202ENST00000499038 PLAC8Q9NZF1 115 aa0.31□□□□□ -2.36
UBE2B-202ENST00000499038 CDK13Q14004 1512 aaKnown RBP0.31□□□□□ -2.36
UBE2B-202ENST00000499038 KDM6BO15054 1643 aa0.31□□□□□ -2.36
UBE2B-202ENST00000499038 CASKIN1Q8WXD9 1431 aa0.3□□□□□ -2.36
UBE2B-202ENST00000499038 MED13LQ71F56 2210 aa0.3□□□□□ -2.36
UBE2B-202ENST00000499038 BCL9LQ86UU0 1499 aa0.3□□□□□ -2.36
UBE2B-202ENST00000499038 TRGV1A0A0A0MS02 117 aa0.3□□□□□ -2.36
UBE2B-202ENST00000499038 MIF4GDA9UHW6 222 aaKnown RBP0.3□□□□□ -2.36
UBE2B-202ENST00000499038 HCG22E2RYF7 251 aa0.3□□□□□ -2.36
UBE2B-202ENST00000499038 DLEU1O43261 78 aa0.3□□□□□ -2.36
UBE2B-202ENST00000499038 SIX6O95475 246 aa0.3□□□□□ -2.36
UBE2B-202ENST00000499038 AKAIN1P0CW23 69 aa0.3□□□□□ -2.36
UBE2B-202ENST00000499038 RBM3P98179 157 aaKnown RBP0.3□□□□□ -2.36
UBE2B-202ENST00000499038 INSL4Q14641 139 aa0.3□□□□□ -2.36
UBE2B-202ENST00000499038 Q56UQ5 140 aa0.3□□□□□ -2.36
UBE2B-202ENST00000499038 Q8N8P6 123 aa0.3□□□□□ -2.36
UBE2B-202ENST00000499038 SMIM11BQ8TCY0 68 aa0.3□□□□□ -2.36
UBE2B-202ENST00000499038 SCP2D1Q9UJQ7 156 aa0.3□□□□□ -2.36
UBE2B-202ENST00000499038 LINC00312Q9Y6C7 94 aa0.3□□□□□ -2.36
UBE2B-202ENST00000499038 PARP14Q460N5 1801 aa0.29□□□□□ -2.36
UBE2B-202ENST00000499038 JMJD1CQ15652 2540 aa0.29□□□□□ -2.36
UBE2B-202ENST00000499038 KCPQ6ZWJ8 1503 aa0.29□□□□□ -2.36
UBE2B-202ENST00000499038 F5P12259 2224 aa0.29□□□□□ -2.36
UBE2B-202ENST00000499038 MYH7P12883 1935 aa0.29□□□□□ -2.36
UBE2B-202ENST00000499038 LRRC37A3O60309 1634 aa0.29□□□□□ -2.36
UBE2B-202ENST00000499038 TRAV13-2A0A0B4J235 113 aa0.29□□□□□ -2.36
UBE2B-202ENST00000499038 TRAV1-2A0A0B4J238 106 aa0.29□□□□□ -2.36
UBE2B-202ENST00000499038 SPAARA0A1B0GVQ0 90 aa0.29□□□□□ -2.36
UBE2B-202ENST00000499038 TMEM14DPA8MWL7 114 aa0.29□□□□□ -2.36
UBE2B-202ENST00000499038 APOC2P02655 101 aa0.29□□□□□ -2.36
UBE2B-202ENST00000499038 VMO1Q7Z5L0 202 aa0.29□□□□□ -2.36
UBE2B-202ENST00000499038 PP6455Q8WZ26 134 aa0.29□□□□□ -2.36
UBE2B-202ENST00000499038 WFDC6Q9BQY6 131 aa0.29□□□□□ -2.36
UBE2B-202ENST00000499038 NWD2Q9ULI1 1742 aa0.29□□□□□ -2.36
UBE2B-202ENST00000499038 ARFGEF1Q9Y6D6 1849 aa0.29□□□□□ -2.36
UBE2B-202ENST00000499038 NAV3Q8IVL0 2385 aa0.28□□□□□ -2.36
UBE2B-202ENST00000499038 MYH9P35579 1960 aaKnown RBP0.28□□□□□ -2.36
UBE2B-202ENST00000499038 SSC5DA1L4H1 1573 aa0.28□□□□□ -2.36
UBE2B-202ENST00000499038 LAMC3Q9Y6N6 1575 aa0.28□□□□□ -2.36
UBE2B-202ENST00000499038 NALCNQ8IZF0 1738 aa0.28□□□□□ -2.36
UBE2B-202ENST00000499038 SIPA1L3O60292 1781 aaPredicted RBP0.28□□□□□ -2.36
UBE2B-202ENST00000499038 PRH1P02810 166 aa0.28□□□□□ -2.36
UBE2B-202ENST00000499038 SMIM6P0DI80 62 aa0.28□□□□□ -2.36
UBE2B-202ENST00000499038 GCHFRP30047 84 aa0.28□□□□□ -2.36
UBE2B-202ENST00000499038 CATR1Q13166 79 aa0.28□□□□□ -2.36
UBE2B-202ENST00000499038 C10orf128Q5T292 105 aa0.28□□□□□ -2.36
UBE2B-202ENST00000499038 Q6ZRX8 168 aa0.28□□□□□ -2.36
UBE2B-202ENST00000499038 PPP3R2Q96LZ3 170 aa0.28□□□□□ -2.36
UBE2B-202ENST00000499038 AQP10Q96PS8 301 aa0.28□□□□□ -2.36
UBE2B-202ENST00000499038 PROK2Q9HC23 129 aa0.28□□□□□ -2.36
UBE2B-202ENST00000499038 SCN3BQ9NY72 215 aa0.28□□□□□ -2.36
UBE2B-202ENST00000499038 A2ML1A8K2U0 1454 aa0.28□□□□□ -2.37
UBE2B-202ENST00000499038 PXDNQ92626 1479 aa0.28□□□□□ -2.37
UBE2B-202ENST00000499038 ARAP2Q8WZ64 1704 aa0.27□□□□□ -2.37
UBE2B-202ENST00000499038 SNAPC5O75971 98 aa0.27□□□□□ -2.37
UBE2B-202ENST00000499038 PPP1R17O96001 155 aa0.27□□□□□ -2.37
UBE2B-202ENST00000499038 NMBP08949 121 aa0.27□□□□□ -2.37
UBE2B-202ENST00000499038 MRPL54Q6P161 138 aaKnown RBP0.27□□□□□ -2.37
UBE2B-202ENST00000499038 BAGE3Q86Y29 109 aa0.27□□□□□ -2.37
UBE2B-202ENST00000499038 C8orf59Q8N0T1 100 aaPredicted RBP0.27□□□□□ -2.37
UBE2B-202ENST00000499038 SMR3AQ99954 134 aa0.27□□□□□ -2.37
UBE2B-202ENST00000499038 C2orf88Q9BSF0 95 aa0.27□□□□□ -2.37
UBE2B-202ENST00000499038 KTN1Q86UP2 1357 aaKnown RBP0.27□□□□□ -2.37
UBE2B-202ENST00000499038 CPSF1Q10570 1443 aaKnown RBP0.27□□□□□ -2.37
UBE2B-202ENST00000499038 PPIP5K1Q6PFW1 1433 aa0.27□□□□□ -2.37
UBE2B-202ENST00000499038 SMG6Q86US8 1419 aaKnown RBP0.27□□□□□ -2.37
UBE2B-202ENST00000499038 GOLGA3Q08378 1498 aa0.27□□□□□ -2.37
UBE2B-202ENST00000499038 ZMYM4Q5VZL5 1548 aa0.27□□□□□ -2.37
UBE2B-202ENST00000499038 QRICH2Q9H0J4 1663 aa0.27□□□□□ -2.37
UBE2B-202ENST00000499038 OOSP1A8MZH6 123 aa0.26□□□□□ -2.37
UBE2B-202ENST00000499038 LINC00587B1AMM8 73 aa0.26□□□□□ -2.37
UBE2B-202ENST00000499038 TNFP01375 233 aa0.26□□□□□ -2.37
UBE2B-202ENST00000499038 IFNGP01579 166 aa0.26□□□□□ -2.37
UBE2B-202ENST00000499038 KRTAP2-3P0C7H8 128 aa0.26□□□□□ -2.37
UBE2B-202ENST00000499038 CCL18P55774 89 aa0.26□□□□□ -2.37
UBE2B-202ENST00000499038 TPPP2P59282 170 aa0.26□□□□□ -2.37
UBE2B-202ENST00000499038 C9orf153Q5TBE3 101 aa0.26□□□□□ -2.37
UBE2B-202ENST00000499038 Q5VV11 94 aa0.26□□□□□ -2.37
UBE2B-202ENST00000499038 TTC9CQ8N5M4 171 aa0.26□□□□□ -2.37
UBE2B-202ENST00000499038 TMEM203Q969S6 136 aa0.26□□□□□ -2.37
UBE2B-202ENST00000499038 SPANXDQ9BXN6 97 aa0.26□□□□□ -2.37
UBE2B-202ENST00000499038 KRTAP2-4Q9BYR9 128 aa0.26□□□□□ -2.37
UBE2B-202ENST00000499038 KRTAP2-1Q9BYU5 128 aa0.26□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms