RNA–Protein interactions for RNA: ENST00000380992.5

TSSC4-202, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TSSC4, Length 992 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-202ENST00000380992 LINC01556Q5JQF7 62 aa11.09□□□□□ -0.63
TSSC4-202ENST00000380992 C15orf54Q8N8G6 183 aa11.09□□□□□ -0.63
TSSC4-202ENST00000380992 KRTAP4-5Q9BYR2 181 aa11.09□□□□□ -0.63
TSSC4-202ENST00000380992 KIF25-AS1Q9Y6Z4 181 aa11.09□□□□□ -0.63
TSSC4-202ENST00000380992 GAGE12JA6NER3 117 aa11.08□□□□□ -0.64
TSSC4-202ENST00000380992 GAGE1Q13065 139 aa11.08□□□□□ -0.64
TSSC4-202ENST00000380992 GAGE4Q13068 117 aa11.08□□□□□ -0.64
TSSC4-202ENST00000380992 GAGE5Q13069 117 aa11.08□□□□□ -0.64
TSSC4-202ENST00000380992 GAGE13Q4V321 117 aa11.08□□□□□ -0.64
TSSC4-202ENST00000380992 SPANXN1Q5VSR9 72 aa11.08□□□□□ -0.64
TSSC4-202ENST00000380992 FER1L6-AS1Q8NA97 138 aa11.08□□□□□ -0.64
TSSC4-202ENST00000380992 OR10G8Q8NGN5 311 aa11.08□□□□□ -0.64
TSSC4-202ENST00000380992 HSPG2P98160 4391 aa11.08□□□□□ -0.64
TSSC4-202ENST00000380992 A0A087WTM6 91 aa11.07□□□□□ -0.64
TSSC4-202ENST00000380992 TRAV8-6A0A0B4J262 113 aa11.07□□□□□ -0.64
TSSC4-202ENST00000380992 SSTP61278 116 aa11.07□□□□□ -0.64
TSSC4-202ENST00000380992 LELP1Q5T871 98 aa11.07□□□□□ -0.64
TSSC4-202ENST00000380992 Q8N1X5 172 aa11.07□□□□□ -0.64
TSSC4-202ENST00000380992 MAPKAPK5-AS1Q8N8E1 139 aa11.07□□□□□ -0.64
TSSC4-202ENST00000380992 ATP6V0E2Q8NHE4 81 aa11.07□□□□□ -0.64
TSSC4-202ENST00000380992 GTSF1LQ9H1H1 148 aa11.07□□□□□ -0.64
TSSC4-202ENST00000380992 V9GYV3 84 aa11.07□□□□□ -0.64
TSSC4-202ENST00000380992 IBA57-AS1B1ANH7 110 aa11.06□□□□□ -0.64
TSSC4-202ENST00000380992 ATRAIDQ6UW56 229 aa11.06□□□□□ -0.64
TSSC4-202ENST00000380992 RPP21Q9H633 154 aaKnown RBP11.06□□□□□ -0.64
TSSC4-202ENST00000380992 XKRY2A2RUG3 117 aa11.05□□□□□ -0.64
TSSC4-202ENST00000380992 FAM231BA6NCW3 169 aa11.05□□□□□ -0.64
TSSC4-202ENST00000380992 GATCO43716 136 aaKnown RBP11.05□□□□□ -0.64
TSSC4-202ENST00000380992 RAB4BP61018 213 aa11.05□□□□□ -0.64
TSSC4-202ENST00000380992 LYZL1Q6UWQ5 148 aa11.05□□□□□ -0.64
TSSC4-202ENST00000380992 IMMP2LQ96T52 175 aa11.05□□□□□ -0.64
TSSC4-202ENST00000380992 TPPP3Q9BW30 176 aa11.05□□□□□ -0.64
TSSC4-202ENST00000380992 RPS10P5Q9NQ39 176 aa11.05□□□□□ -0.64
TSSC4-202ENST00000380992 DNAH5Q8TE73 4624 aa11.04□□□□□ -0.64
TSSC4-202ENST00000380992 TRBV10-1A0A0K0K1A3 114 aa11.04□□□□□ -0.64
TSSC4-202ENST00000380992 F2Z2F3 143 aa11.04□□□□□ -0.64
TSSC4-202ENST00000380992 CTRLP40313 264 aa11.04□□□□□ -0.64
TSSC4-202ENST00000380992 CACNG7P62955 275 aa11.04□□□□□ -0.64
TSSC4-202ENST00000380992 OR10J3Q5JRS4 329 aa11.04□□□□□ -0.64
TSSC4-202ENST00000380992 GTSF1Q8WW33 167 aa11.04□□□□□ -0.64
TSSC4-202ENST00000380992 CNFNQ9BYD5 112 aa11.04□□□□□ -0.64
TSSC4-202ENST00000380992 GFRA4Q9GZZ7 299 aa11.04□□□□□ -0.64
TSSC4-202ENST00000380992 A8MWL6 223 aa11.03□□□□□ -0.64
TSSC4-202ENST00000380992 WDR73Q6P4I2 378 aa11.03□□□□□ -0.64
TSSC4-202ENST00000380992 ABCA13Q86UQ4 5058 aa11.03□□□□□ -0.64
TSSC4-202ENST00000380992 SMIM27A0A1W2PRY6 76 aa11.02□□□□□ -0.65
TSSC4-202ENST00000380992 FOXA3P55318 350 aaPredicted RBP11.02□□□□□ -0.65
TSSC4-202ENST00000380992 UBE2D3P61077 147 aa11.02□□□□□ -0.65
TSSC4-202ENST00000380992 UBE2D2P62837 147 aa11.02□□□□□ -0.65
TSSC4-202ENST00000380992 LAGE3Q14657 143 aa11.02□□□□□ -0.65
TSSC4-202ENST00000380992 ZNF56Q15929 161 aa11.02□□□□□ -0.65
TSSC4-202ENST00000380992 NEXN-AS1Q8NBZ9 246 aa11.02□□□□□ -0.65
TSSC4-202ENST00000380992 TSKUQ8WUA8 353 aa11.02□□□□□ -0.65
TSSC4-202ENST00000380992 AP1S3Q96PC3 154 aa11.02□□□□□ -0.65
TSSC4-202ENST00000380992 TRBV7-3A0A075B6L6 115 aa11.01□□□□□ -0.65
TSSC4-202ENST00000380992 LRCOL1A6NCL2 159 aa11.01□□□□□ -0.65
TSSC4-202ENST00000380992 NTF3P20783 257 aa11.01□□□□□ -0.65
TSSC4-202ENST00000380992 SMCO4Q9NRQ5 59 aa11.01□□□□□ -0.65
TSSC4-202ENST00000380992 APOBP04114 4563 aaKnown RBP11.01□□□□□ -0.65
TSSC4-202ENST00000380992 Q8N3U1 123 aa11□□□□□ -0.65
TSSC4-202ENST00000380992 TRAV9-1A0A075B6T8 112 aa10.99□□□□□ -0.65
TSSC4-202ENST00000380992 RPL36AP83881 106 aaKnown RBP10.99□□□□□ -0.65
TSSC4-202ENST00000380992 RPL36ALQ969Q0 106 aaKnown RBP10.99□□□□□ -0.65
TSSC4-202ENST00000380992 F5H697 171 aa10.98□□□□□ -0.65
TSSC4-202ENST00000380992 M0QY20 66 aa10.98□□□□□ -0.65
TSSC4-202ENST00000380992 PSCAO43653 123 aa10.98□□□□□ -0.65
TSSC4-202ENST00000380992 SMIM17P0DL12 118 aa10.98□□□□□ -0.65
TSSC4-202ENST00000380992 XGP55808 180 aa10.98□□□□□ -0.65
TSSC4-202ENST00000380992 NTN5Q8WTR8 489 aaPredicted RBP10.98□□□□□ -0.65
TSSC4-202ENST00000380992 NAT8BQ9UHF3 227 aa10.98□□□□□ -0.65
TSSC4-202ENST00000380992 IGHV3-30P01768 117 aa10.97□□□□□ -0.65
TSSC4-202ENST00000380992 IGHV3-33P01772 117 aa10.97□□□□□ -0.65
TSSC4-202ENST00000380992 IGHV3-30-3P0DP02 117 aa10.97□□□□□ -0.65
TSSC4-202ENST00000380992 IGHV3-30-5P0DP03 117 aa10.97□□□□□ -0.65
TSSC4-202ENST00000380992 S100PP25815 95 aa10.97□□□□□ -0.65
TSSC4-202ENST00000380992 SUMO4Q6EEV6 95 aa10.97□□□□□ -0.65
TSSC4-202ENST00000380992 KCNIP4Q6PIL6 250 aa10.97□□□□□ -0.65
TSSC4-202ENST00000380992 BTF3L4Q96K17 158 aa10.97□□□□□ -0.65
TSSC4-202ENST00000380992 YPEL4Q96NS1 127 aa10.97□□□□□ -0.65
TSSC4-202ENST00000380992 HIGD1CA8MV81 97 aa10.96□□□□□ -0.65
TSSC4-202ENST00000380992 TRGC1P0CF51 173 aa10.96□□□□□ -0.65
TSSC4-202ENST00000380992 GCSHP23434 173 aa10.96□□□□□ -0.65
TSSC4-202ENST00000380992 FUSP35637 526 aaKnown RBP eCLIP10.96□□□□□ -0.65
TSSC4-202ENST00000380992 TWIST1Q15672 202 aa10.96□□□□□ -0.65
TSSC4-202ENST00000380992 TM2D2Q9BX73 214 aa10.96□□□□□ -0.65
TSSC4-202ENST00000380992 DPH3P1Q9H4G8 78 aa10.96□□□□□ -0.65
TSSC4-202ENST00000380992 TRBV24-1A0A075B6N3 115 aa10.95□□□□□ -0.66
TSSC4-202ENST00000380992 TRAV8-3A0A0A6YYJ7 113 aa10.95□□□□□ -0.66
TSSC4-202ENST00000380992 MGPP08493 103 aa10.95□□□□□ -0.66
TSSC4-202ENST00000380992 KRTAP10-1P60331 282 aa10.95□□□□□ -0.66
TSSC4-202ENST00000380992 CBLN2Q8IUK8 224 aa10.95□□□□□ -0.66
TSSC4-202ENST00000380992 NUP35Q8NFH5 326 aa10.95□□□□□ -0.66
TSSC4-202ENST00000380992 PGLYRP4Q96LB8 373 aa10.95□□□□□ -0.66
TSSC4-202ENST00000380992 SCO1O75880 301 aa10.94□□□□□ -0.66
TSSC4-202ENST00000380992 ELOBQ15370 118 aa10.94□□□□□ -0.66
TSSC4-202ENST00000380992 NTM-AS1Q6ZSK4 140 aa10.94□□□□□ -0.66
TSSC4-202ENST00000380992 NIT1Q86X76 327 aa10.94□□□□□ -0.66
TSSC4-202ENST00000380992 Q8N814 137 aa10.94□□□□□ -0.66
TSSC4-202ENST00000380992 Q9HAA7 133 aa10.94□□□□□ -0.66
TSSC4-202ENST00000380992 TRBV6-8A0A0A6YYG3 113 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms