RNA–Protein interactions for RNA: ENST00000320280.8

SCAMP1-201, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 3

Gene SCAMP1, Length 3,766 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-201ENST00000320280 GYPEP15421 78 aa2.32□□□□□ -2.04
SCAMP1-201ENST00000320280 ZNF25P17030 456 aaPredicted RBP2.32□□□□□ -2.04
SCAMP1-201ENST00000320280 ELOBQ15370 118 aa2.32□□□□□ -2.04
SCAMP1-201ENST00000320280 C12orf74Q32Q52 190 aa2.32□□□□□ -2.04
SCAMP1-201ENST00000320280 OR10J3Q5JRS4 329 aa2.32□□□□□ -2.04
SCAMP1-201ENST00000320280 HIST2H2BDQ6DRA6 164 aa2.32□□□□□ -2.04
SCAMP1-201ENST00000320280 AMN1Q8IY45 258 aa2.32□□□□□ -2.04
SCAMP1-201ENST00000320280 NXT2Q9NPJ8 142 aaKnown RBP2.32□□□□□ -2.04
SCAMP1-201ENST00000320280 NIT2Q9NQR4 276 aa2.32□□□□□ -2.04
SCAMP1-201ENST00000320280 TRGV2A0A075B6R0 118 aa2.31□□□□□ -2.04
SCAMP1-201ENST00000320280 TRGV1A0A0A0MS02 117 aa2.31□□□□□ -2.04
SCAMP1-201ENST00000320280 A0A0J9YWU9 116 aa2.31□□□□□ -2.04
SCAMP1-201ENST00000320280 APOC3P02656 99 aa2.31□□□□□ -2.04
SCAMP1-201ENST00000320280 TTC32Q5I0X7 151 aa2.31□□□□□ -2.04
SCAMP1-201ENST00000320280 MUC7Q8TAX7 377 aa2.31□□□□□ -2.04
SCAMP1-201ENST00000320280 NOP10Q9NPE3 64 aaKnown RBP2.31□□□□□ -2.04
SCAMP1-201ENST00000320280 RPS10P5Q9NQ39 176 aa2.31□□□□□ -2.04
SCAMP1-201ENST00000320280 MRPS16Q9Y3D3 137 aaKnown RBP2.31□□□□□ -2.04
SCAMP1-201ENST00000320280 ATRQ13535 2644 aa2.31□□□□□ -2.04
SCAMP1-201ENST00000320280 NACAE9PAV3 2078 aa2.31□□□□□ -2.04
SCAMP1-201ENST00000320280 GNRH2O43555 120 aa2.31□□□□□ -2.04
SCAMP1-201ENST00000320280 NTF3P20783 257 aa2.31□□□□□ -2.04
SCAMP1-201ENST00000320280 FXYD7P58549 80 aa2.31□□□□□ -2.04
SCAMP1-201ENST00000320280 LINC00315P59091 139 aa2.31□□□□□ -2.04
SCAMP1-201ENST00000320280 ODF1Q14990 250 aa2.31□□□□□ -2.04
SCAMP1-201ENST00000320280 TWIST1Q15672 202 aa2.31□□□□□ -2.04
SCAMP1-201ENST00000320280 ORMDL3Q8N138 153 aa2.31□□□□□ -2.04
SCAMP1-201ENST00000320280 C10orf126Q8N4M7 172 aa2.31□□□□□ -2.04
SCAMP1-201ENST00000320280 MDFICQ9P1T7 246 aa2.31□□□□□ -2.04
SCAMP1-201ENST00000320280 CSDC2Q9Y534 153 aaKnown RBP2.31□□□□□ -2.04
SCAMP1-201ENST00000320280 TRBV7-3A0A075B6L6 115 aa2.31□□□□□ -2.04
SCAMP1-201ENST00000320280 DEFB131BA0A096LNP1 70 aa2.31□□□□□ -2.04
SCAMP1-201ENST00000320280 TRGV4A0A0C4DH28 118 aa2.31□□□□□ -2.04
SCAMP1-201ENST00000320280 TRBV27A0A0K0K1C4 114 aa2.31□□□□□ -2.04
SCAMP1-201ENST00000320280 F8WDY8 70 aa2.31□□□□□ -2.04
SCAMP1-201ENST00000320280 EIF3GO75821 320 aaKnown RBP eCLIP2.31□□□□□ -2.04
SCAMP1-201ENST00000320280 UBE2D3P61077 147 aa2.31□□□□□ -2.04
SCAMP1-201ENST00000320280 UBE2D2P62837 147 aa2.31□□□□□ -2.04
SCAMP1-201ENST00000320280 LAGE3Q14657 143 aa2.31□□□□□ -2.04
SCAMP1-201ENST00000320280 MUC21Q5SSG8 566 aa2.31□□□□□ -2.04
SCAMP1-201ENST00000320280 LGALS9CQ6DKI2 356 aa2.31□□□□□ -2.04
SCAMP1-201ENST00000320280 TMEM136Q6ZRR5 245 aa2.31□□□□□ -2.04
SCAMP1-201ENST00000320280 OR10AG1Q8NH19 301 aa2.31□□□□□ -2.04
SCAMP1-201ENST00000320280 M0QY20 66 aa2.3□□□□□ -2.04
SCAMP1-201ENST00000320280 DEFB1P60022 68 aa2.3□□□□□ -2.04
SCAMP1-201ENST00000320280 ORMDL2Q53FV1 153 aa2.3□□□□□ -2.04
SCAMP1-201ENST00000320280 PAPPA-AS1Q5QFB9 102 aa2.3□□□□□ -2.04
SCAMP1-201ENST00000320280 LELP1Q5T871 98 aa2.3□□□□□ -2.04
SCAMP1-201ENST00000320280 LINC01561Q8N1V8 128 aa2.3□□□□□ -2.04
SCAMP1-201ENST00000320280 CHCHD1Q96BP2 118 aaKnown RBP2.3□□□□□ -2.04
SCAMP1-201ENST00000320280 MAP1LC3AQ9H492 121 aa2.3□□□□□ -2.04
SCAMP1-201ENST00000320280 HHLA3Q9XRX5 114 aa2.3□□□□□ -2.04
SCAMP1-201ENST00000320280 PKIGQ9Y2B9 76 aa2.3□□□□□ -2.04
SCAMP1-201ENST00000320280 ALMS1Q8TCU4 4167 aa2.3□□□□□ -2.04
SCAMP1-201ENST00000320280 MUC4Q99102 2169 aa2.3□□□□□ -2.04
SCAMP1-201ENST00000320280 VCYO14598 125 aa2.3□□□□□ -2.04
SCAMP1-201ENST00000320280 GZMBP10144 247 aa2.3□□□□□ -2.04
SCAMP1-201ENST00000320280 Q0VG73 95 aa2.3□□□□□ -2.04
SCAMP1-201ENST00000320280 IQCJQ1A5X6 159 aa2.3□□□□□ -2.04
SCAMP1-201ENST00000320280 Q6ZTI0 123 aa2.3□□□□□ -2.04
SCAMP1-201ENST00000320280 MRPL52Q86TS9 123 aaKnown RBP2.3□□□□□ -2.04
SCAMP1-201ENST00000320280 PHLDA1Q8WV24 401 aaPredicted RBP2.3□□□□□ -2.04
SCAMP1-201ENST00000320280 RNF185Q96GF1 192 aa2.3□□□□□ -2.04
SCAMP1-201ENST00000320280 ST20Q9HBF5 79 aa2.3□□□□□ -2.04
SCAMP1-201ENST00000320280 WNK1Q9H4A3 2382 aa2.3□□□□□ -2.04
SCAMP1-201ENST00000320280 NIPBLQ6KC79 2804 aaeCLIP2.3□□□□□ -2.04
SCAMP1-201ENST00000320280 TRAV9-2A0A087WT02 112 aa2.3□□□□□ -2.04
SCAMP1-201ENST00000320280 TRAV8-6A0A0B4J262 113 aa2.3□□□□□ -2.04
SCAMP1-201ENST00000320280 A0A1B0GUV1 79 aa2.3□□□□□ -2.04
SCAMP1-201ENST00000320280 I3L3M4 83 aa2.3□□□□□ -2.04
SCAMP1-201ENST00000320280 APCSP02743 223 aa2.3□□□□□ -2.04
SCAMP1-201ENST00000320280 SNRPCP09234 159 aaKnown RBP2.3□□□□□ -2.04
SCAMP1-201ENST00000320280 ESDP10768 282 aa2.3□□□□□ -2.04
SCAMP1-201ENST00000320280 SSTP61278 116 aa2.3□□□□□ -2.04
SCAMP1-201ENST00000320280 SUMO4Q6EEV6 95 aa2.3□□□□□ -2.04
SCAMP1-201ENST00000320280 NEGR1Q7Z3B1 354 aa2.3□□□□□ -2.04
SCAMP1-201ENST00000320280 Q8N8P6 123 aa2.3□□□□□ -2.04
SCAMP1-201ENST00000320280 MRPL16Q9NX20 251 aaKnown RBP2.3□□□□□ -2.04
SCAMP1-201ENST00000320280 PYGO1Q9Y3Y4 419 aa2.3□□□□□ -2.04
SCAMP1-201ENST00000320280 TNFRSF18Q9Y5U5 241 aa2.3□□□□□ -2.04
SCAMP1-201ENST00000320280 COX11Q9Y6N1 276 aa2.3□□□□□ -2.04
SCAMP1-201ENST00000320280 DNAH9Q9NYC9 4486 aa2.3□□□□□ -2.04
SCAMP1-201ENST00000320280 SACSQ9NZJ4 4579 aa2.29□□□□□ -2.04
SCAMP1-201ENST00000320280 IGHV3OR16-12A0A075B7B8 117 aa2.29□□□□□ -2.04
SCAMP1-201ENST00000320280 IGHV1-24A0A0C4DH33 117 aa2.29□□□□□ -2.04
SCAMP1-201ENST00000320280 GAGE12BA1L429 117 aa2.29□□□□□ -2.04
SCAMP1-201ENST00000320280 GAGE7O76087 117 aa2.29□□□□□ -2.04
SCAMP1-201ENST00000320280 GAGE12FP0CL80 117 aa2.29□□□□□ -2.04
SCAMP1-201ENST00000320280 GAGE12GP0CL81 117 aa2.29□□□□□ -2.04
SCAMP1-201ENST00000320280 GAGE12IP0CL82 117 aa2.29□□□□□ -2.04
SCAMP1-201ENST00000320280 POLR2KP53803 58 aaKnown RBP2.29□□□□□ -2.04
SCAMP1-201ENST00000320280 EMP1P54849 157 aa2.29□□□□□ -2.04
SCAMP1-201ENST00000320280 CCL18P55774 89 aa2.29□□□□□ -2.04
SCAMP1-201ENST00000320280 MRPS36P82909 103 aaKnown RBP2.29□□□□□ -2.04
SCAMP1-201ENST00000320280 ZNF56Q15929 161 aa2.29□□□□□ -2.04
SCAMP1-201ENST00000320280 COA6Q5JTJ3 125 aaKnown RBP2.29□□□□□ -2.04
SCAMP1-201ENST00000320280 FAM19A3Q7Z5A8 133 aa2.29□□□□□ -2.04
SCAMP1-201ENST00000320280 NFE4Q86UQ8 179 aa2.29□□□□□ -2.04
SCAMP1-201ENST00000320280 RMI2Q96E14 147 aa2.29□□□□□ -2.04
SCAMP1-201ENST00000320280 SPANXA1Q9NS26 97 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms