RNA–Protein interactions for RNA: ENSMUST00000115659.5

Pcdha9-201, Transcript of Protocadherin alpha-9, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdha9, Length 5,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9-201ENSMUST00000115659 Hist1h2bhQ64478 126 aa13.02□□□□□ -0.32
Pcdha9-201ENSMUST00000115659 Hist2h2bbQ64525 126 aa13.02□□□□□ -0.32
Pcdha9-201ENSMUST00000115659 Hist1h2bcQ6ZWY9 126 aaKnown RBP13.02□□□□□ -0.32
Pcdha9-201ENSMUST00000115659 P01783 136 aa13.02□□□□□ -0.33
Pcdha9-201ENSMUST00000115659 C1ql4Q4ZJM9 238 aa13.02□□□□□ -0.33
Pcdha9-201ENSMUST00000115659 Olfr150Q60895 312 aa13.02□□□□□ -0.33
Pcdha9-201ENSMUST00000115659 Nrn1Q8CFV4 142 aa13.02□□□□□ -0.33
Pcdha9-201ENSMUST00000115659 DnlzQ9D113 177 aa13.02□□□□□ -0.33
Pcdha9-201ENSMUST00000115659 Gm20825J3QM67 227 aa13.02□□□□□ -0.33
Pcdha9-201ENSMUST00000115659 Ssty2Q149W4 227 aa13.02□□□□□ -0.33
Pcdha9-201ENSMUST00000115659 Wdr83osQ6ZWX0 106 aa13.02□□□□□ -0.33
Pcdha9-201ENSMUST00000115659 Chd3B1AR17 2055 aa13.02□□□□□ -0.33
Pcdha9-201ENSMUST00000115659 Trdv2-1A0A0G2JGB9 116 aa13.02□□□□□ -0.33
Pcdha9-201ENSMUST00000115659 Zic3Q62521 466 aa13.02□□□□□ -0.33
Pcdha9-201ENSMUST00000115659 SprnQ8BWU1 147 aa13.02□□□□□ -0.33
Pcdha9-201ENSMUST00000115659 CrygsO35486 178 aa13.01□□□□□ -0.33
Pcdha9-201ENSMUST00000115659 Tac3P55099 116 aa13.01□□□□□ -0.33
Pcdha9-201ENSMUST00000115659 Q9CQM1 111 aa13.01□□□□□ -0.33
Pcdha9-201ENSMUST00000115659 H2al3Q9D4U4 128 aa13.01□□□□□ -0.33
Pcdha9-201ENSMUST00000115659 Dock1Q8BUR4 1865 aa13.01□□□□□ -0.33
Pcdha9-201ENSMUST00000115659 6430628N08RikA0A0U1RQ45 177 aa13.01□□□□□ -0.33
Pcdha9-201ENSMUST00000115659 Siglec15A7E1W8 342 aa13.01□□□□□ -0.33
Pcdha9-201ENSMUST00000115659 Olfr1380Q7TQT5 311 aa13.01□□□□□ -0.33
Pcdha9-201ENSMUST00000115659 Tmem177Q8BPE4 311 aa13.01□□□□□ -0.33
Pcdha9-201ENSMUST00000115659 Znf319Q9ERR8 581 aa13.01□□□□□ -0.33
Pcdha9-201ENSMUST00000115659 Sbf2E9PXF8 1872 aa13.01□□□□□ -0.33
Pcdha9-201ENSMUST00000115659 Trav13n-4A0A0G2JG01 110 aa13.01□□□□□ -0.33
Pcdha9-201ENSMUST00000115659 4931422A03RikA2BHN9 113 aa13.01□□□□□ -0.33
Pcdha9-201ENSMUST00000115659 PpoxP51175 477 aa13.01□□□□□ -0.33
Pcdha9-201ENSMUST00000115659 Mob4Q6PEB6 225 aa13.01□□□□□ -0.33
Pcdha9-201ENSMUST00000115659 Dtx2Q8R3P2 619 aa13.01□□□□□ -0.33
Pcdha9-201ENSMUST00000115659 Gtf3aQ8VHT7 364 aa13.01□□□□□ -0.33
Pcdha9-201ENSMUST00000115659 D930007J09RikQ9D2K6 131 aa13.01□□□□□ -0.33
Pcdha9-201ENSMUST00000115659 Ighv7-3A0A075B5R2 120 aa13.01□□□□□ -0.33
Pcdha9-201ENSMUST00000115659 Ighv1-15A0A0A6YXA5 117 aa13.01□□□□□ -0.33
Pcdha9-201ENSMUST00000115659 Iglv3A0A0B4J1K5 122 aa13.01□□□□□ -0.33
Pcdha9-201ENSMUST00000115659 Gm44973A0A140LJJ1 189 aa13.01□□□□□ -0.33
Pcdha9-201ENSMUST00000115659 Gm20878L7N244 103 aa13.01□□□□□ -0.33
Pcdha9-201ENSMUST00000115659 Nkx2-8O70584 235 aa13.01□□□□□ -0.33
Pcdha9-201ENSMUST00000115659 Dicer1Q8R418 1916 aa13□□□□□ -0.33
Pcdha9-201ENSMUST00000115659 Psme4Q5SSW2 1843 aa13□□□□□ -0.33
Pcdha9-201ENSMUST00000115659 Znf691Q3TDE8 283 aa13□□□□□ -0.33
Pcdha9-201ENSMUST00000115659 Tmprss12Q3V0Q7 336 aa13□□□□□ -0.33
Pcdha9-201ENSMUST00000115659 Rnf151Q9CQ29 239 aa13□□□□□ -0.33
Pcdha9-201ENSMUST00000115659 Cd81P35762 236 aa13□□□□□ -0.33
Pcdha9-201ENSMUST00000115659 Ss18l1Q8BW22 402 aa13□□□□□ -0.33
Pcdha9-201ENSMUST00000115659 Prss29Q99MS4 279 aa13□□□□□ -0.33
Pcdha9-201ENSMUST00000115659 Zfpl1Q9DB43 310 aa13□□□□□ -0.33
Pcdha9-201ENSMUST00000115659 NracQ8BNX7 165 aa13□□□□□ -0.33
Pcdha9-201ENSMUST00000115659 Tmem100Q9CQG9 134 aa13□□□□□ -0.33
Pcdha9-201ENSMUST00000115659 MNCb-2875Q9DCB3 74 aa13□□□□□ -0.33
Pcdha9-201ENSMUST00000115659 Igh-3P01867 404 aa13□□□□□ -0.33
Pcdha9-201ENSMUST00000115659 Higd1bQ99JY6 98 aa13□□□□□ -0.33
Pcdha9-201ENSMUST00000115659 Dctn5Q9QZB9 182 aa13□□□□□ -0.33
Pcdha9-201ENSMUST00000115659 Adra2aQ01338 450 aa12.99□□□□□ -0.33
Pcdha9-201ENSMUST00000115659 Slc35d2Q762D5 326 aa12.99□□□□□ -0.33
Pcdha9-201ENSMUST00000115659 Olfr491Q8VG06 310 aa12.99□□□□□ -0.33
Pcdha9-201ENSMUST00000115659 Zfp236S4R299 1847 aa12.99□□□□□ -0.33
Pcdha9-201ENSMUST00000115659 Trav16nA0A075B634 117 aa12.99□□□□□ -0.33
Pcdha9-201ENSMUST00000115659 eef1akmt3D3YWP0 232 aa12.99□□□□□ -0.33
Pcdha9-201ENSMUST00000115659 Mbnl3Q8R003 342 aaKnown RBP12.99□□□□□ -0.33
Pcdha9-201ENSMUST00000115659 Gm10073E9Q3T0 114 aa12.99□□□□□ -0.33
Pcdha9-201ENSMUST00000115659 Hcfc2Q9D968 241 aa12.99□□□□□ -0.33
Pcdha9-201ENSMUST00000115659 Ckap5A2AGT5 2032 aaKnown RBP12.99□□□□□ -0.33
Pcdha9-201ENSMUST00000115659 Brca1P48754 1812 aa12.99□□□□□ -0.33
Pcdha9-201ENSMUST00000115659 Malrd1A2AJX4 2123 aa12.99□□□□□ -0.33
Pcdha9-201ENSMUST00000115659 Gm21983D6RFS9 131 aa12.99□□□□□ -0.33
Pcdha9-201ENSMUST00000115659 Fgf5P15656 264 aa12.99□□□□□ -0.33
Pcdha9-201ENSMUST00000115659 Necap2Q9D1J1 266 aa12.99□□□□□ -0.33
Pcdha9-201ENSMUST00000115659 Arpc1aQ9R0Q6 370 aa12.99□□□□□ -0.33
Pcdha9-201ENSMUST00000115659 Pax9P47242 342 aa12.98□□□□□ -0.33
Pcdha9-201ENSMUST00000115659 Foxc2Q61850 494 aa12.98□□□□□ -0.33
Pcdha9-201ENSMUST00000115659 P01801 115 aa12.98□□□□□ -0.33
Pcdha9-201ENSMUST00000115659 NgfP01139 241 aa12.98□□□□□ -0.33
Pcdha9-201ENSMUST00000115659 NrepQ07475 68 aa12.98□□□□□ -0.33
Pcdha9-201ENSMUST00000115659 Olfr761Q7TRJ0 323 aa12.98□□□□□ -0.33
Pcdha9-201ENSMUST00000115659 Olfr523Q8VFE7 317 aa12.98□□□□□ -0.33
Pcdha9-201ENSMUST00000115659 Gm21616B6ZB74 166 aa12.98□□□□□ -0.33
Pcdha9-201ENSMUST00000115659 Smr2O09133 150 aa12.98□□□□□ -0.33
Pcdha9-201ENSMUST00000115659 Dnase2P56542 353 aa12.98□□□□□ -0.33
Pcdha9-201ENSMUST00000115659 Atp5iQ06185 71 aaKnown RBP12.98□□□□□ -0.33
Pcdha9-201ENSMUST00000115659 Fbln7Q501P1 440 aa12.98□□□□□ -0.33
Pcdha9-201ENSMUST00000115659 Olfr1419Q7TQS2 343 aa12.98□□□□□ -0.33
Pcdha9-201ENSMUST00000115659 Gm21974F6W3F3 119 aa12.98□□□□□ -0.33
Pcdha9-201ENSMUST00000115659 NmbQ9CR53 121 aa12.98□□□□□ -0.33
Pcdha9-201ENSMUST00000115659 Hyls1Q9CXX0 307 aa12.98□□□□□ -0.33
Pcdha9-201ENSMUST00000115659 AmtnQ9D3J8 213 aa12.98□□□□□ -0.33
Pcdha9-201ENSMUST00000115659 Gm45871A0A1B0GRI9 540 aa12.97□□□□□ -0.33
Pcdha9-201ENSMUST00000115659 1700015F17RikD3YUK8 150 aa12.97□□□□□ -0.33
Pcdha9-201ENSMUST00000115659 Gm17727E9Q4V7 109 aa12.97□□□□□ -0.33
Pcdha9-201ENSMUST00000115659 Supt4h1aP63271 117 aa12.97□□□□□ -0.33
Pcdha9-201ENSMUST00000115659 Spint3Q3UW09 88 aa12.97□□□□□ -0.33
Pcdha9-201ENSMUST00000115659 Gm20854Q62461 227 aa12.97□□□□□ -0.33
Pcdha9-201ENSMUST00000115659 Klhdc1Q80YG3 406 aa12.97□□□□□ -0.33
Pcdha9-201ENSMUST00000115659 IcosQ9WVS0 200 aa12.97□□□□□ -0.33
Pcdha9-201ENSMUST00000115659 Trav4-4-dv10A0A075B651 110 aa12.97□□□□□ -0.33
Pcdha9-201ENSMUST00000115659 Ca2P00920 260 aaKnown RBP12.97□□□□□ -0.33
Pcdha9-201ENSMUST00000115659 LtaP09225 202 aa12.97□□□□□ -0.33
Pcdha9-201ENSMUST00000115659 HrkP62816 92 aa12.97□□□□□ -0.33
Pcdha9-201ENSMUST00000115659 Gm10645Q3UPY1 145 aa12.97□□□□□ -0.33
Retrieved 100 of 22,080 RNA–protein pairs in 30.4 ms