RNA–Protein interactions for RNA: ENST00000622183.1

CPNE3-213, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 156 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-213ENST00000622183 NAA38Q9BRA0 125 aaKnown RBP1.82□□□□□ -2.12
CPNE3-213ENST00000622183 AGPAT4-IT1Q9H0P7 198 aa1.82□□□□□ -2.12
CPNE3-213ENST00000622183 ST20Q9HBF5 79 aa1.82□□□□□ -2.12
CPNE3-213ENST00000622183 CACFD1Q9UGQ2 172 aa1.82□□□□□ -2.12
CPNE3-213ENST00000622183 LHFPL6Q9Y693 200 aa1.82□□□□□ -2.12
CPNE3-213ENST00000622183 IQGAP1P46940 1657 aa1.82□□□□□ -2.12
CPNE3-213ENST00000622183 USP54Q70EL1 1684 aa1.82□□□□□ -2.12
CPNE3-213ENST00000622183 TJP1Q07157 1748 aa1.82□□□□□ -2.12
CPNE3-213ENST00000622183 MED12LQ86YW9 2145 aa1.82□□□□□ -2.12
CPNE3-213ENST00000622183 COL14A1Q05707 1796 aaKnown RBP1.82□□□□□ -2.12
CPNE3-213ENST00000622183 NUP98P52948 1817 aa1.82□□□□□ -2.12
CPNE3-213ENST00000622183 AFDNP55196 1824 aaKnown RBP1.82□□□□□ -2.12
CPNE3-213ENST00000622183 OBSL1O75147 1896 aa1.82□□□□□ -2.12
CPNE3-213ENST00000622183 CPAMD8Q8IZJ3 1885 aa1.82□□□□□ -2.12
CPNE3-213ENST00000622183 TRPM2O94759 1503 aa1.81□□□□□ -2.12
CPNE3-213ENST00000622183 ASXL1Q8IXJ9 1541 aa1.81□□□□□ -2.12
CPNE3-213ENST00000622183 MICAL3Q7RTP6 2002 aa1.81□□□□□ -2.12
CPNE3-213ENST00000622183 MDC1Q14676 2089 aaKnown RBP1.81□□□□□ -2.12
CPNE3-213ENST00000622183 C3P01024 1663 aa1.81□□□□□ -2.12
CPNE3-213ENST00000622183 CRYBG1Q9Y4K1 1723 aa1.81□□□□□ -2.12
CPNE3-213ENST00000622183 MCRIP1C9JLW8 97 aa1.81□□□□□ -2.12
CPNE3-213ENST00000622183 H3BMG7 143 aa1.81□□□□□ -2.12
CPNE3-213ENST00000622183 BUB1B-PAK6H3BSN5 160 aa1.81□□□□□ -2.12
CPNE3-213ENST00000622183 SDCBPO00560 298 aaPredicted RBP1.81□□□□□ -2.12
CPNE3-213ENST00000622183 SSSCA1O60232 199 aa1.81□□□□□ -2.12
CPNE3-213ENST00000622183 HYPMO75409 117 aa1.81□□□□□ -2.12
CPNE3-213ENST00000622183 LYZL6O75951 148 aa1.81□□□□□ -2.12
CPNE3-213ENST00000622183 RBP4P02753 201 aa1.81□□□□□ -2.12
CPNE3-213ENST00000622183 CLPSP04118 112 aa1.81□□□□□ -2.12
CPNE3-213ENST00000622183 PYYP10082 97 aa1.81□□□□□ -2.12
CPNE3-213ENST00000622183 SLC25A6P12236 298 aa1.81□□□□□ -2.12
CPNE3-213ENST00000622183 DPPA3Q6W0C5 159 aa1.81□□□□□ -2.12
CPNE3-213ENST00000622183 LCA10Q71F78 164 aa1.81□□□□□ -2.12
CPNE3-213ENST00000622183 MIR17HGQ75NE6 70 aa1.81□□□□□ -2.12
CPNE3-213ENST00000622183 TRAPPC6BQ86SZ2 158 aa1.81□□□□□ -2.12
CPNE3-213ENST00000622183 Q8N2B8 174 aa1.81□□□□□ -2.12
CPNE3-213ENST00000622183 C15orf53Q8NAA6 179 aa1.81□□□□□ -2.12
CPNE3-213ENST00000622183 ZNF563Q8TA94 476 aa1.81□□□□□ -2.12
CPNE3-213ENST00000622183 AP1S3Q96PC3 154 aa1.81□□□□□ -2.12
CPNE3-213ENST00000622183 PCTPQ9UKL6 214 aa1.81□□□□□ -2.12
CPNE3-213ENST00000622183 TPRKBQ9Y3C4 175 aa1.81□□□□□ -2.12
CPNE3-213ENST00000622183 DNAJC15Q9Y5T4 150 aa1.81□□□□□ -2.12
CPNE3-213ENST00000622183 SERP1Q9Y6X1 66 aa1.81□□□□□ -2.12
CPNE3-213ENST00000622183 COL1A1P02452 1464 aaPredicted RBP1.81□□□□□ -2.12
CPNE3-213ENST00000622183 ARHGEF5Q12774 1597 aa1.81□□□□□ -2.12
CPNE3-213ENST00000622183 MROH2BQ7Z745 1585 aa1.81□□□□□ -2.12
CPNE3-213ENST00000622183 CICQ96RK0 1608 aaPredicted RBP1.8□□□□□ -2.12
CPNE3-213ENST00000622183 TRBV20-1A0A075B6N2 111 aa1.8□□□□□ -2.12
CPNE3-213ENST00000622183 TRBV27A0A0K0K1C4 114 aa1.8□□□□□ -2.12
CPNE3-213ENST00000622183 C7orf77A4D0Y5 90 aa1.8□□□□□ -2.12
CPNE3-213ENST00000622183 A8MWV9 139 aa1.8□□□□□ -2.12
CPNE3-213ENST00000622183 APOC4-APOC2K7ER74 178 aa1.8□□□□□ -2.12
CPNE3-213ENST00000622183 M0R378 163 aa1.8□□□□□ -2.12
CPNE3-213ENST00000622183 APOC2P02655 101 aa1.8□□□□□ -2.12
CPNE3-213ENST00000622183 SLC25A5P05141 298 aaKnown RBP1.8□□□□□ -2.12
CPNE3-213ENST00000622183 GYPBP06028 91 aa1.8□□□□□ -2.12
CPNE3-213ENST00000622183 HLA-DRB4P13762 266 aa1.8□□□□□ -2.12
CPNE3-213ENST00000622183 COX7CP15954 63 aa1.8□□□□□ -2.12
CPNE3-213ENST00000622183 SDC2P34741 201 aa1.8□□□□□ -2.12
CPNE3-213ENST00000622183 INSL3P51460 131 aa1.8□□□□□ -2.12
CPNE3-213ENST00000622183 MRPS36P82909 103 aaKnown RBP1.8□□□□□ -2.12
CPNE3-213ENST00000622183 ELOBQ15370 118 aa1.8□□□□□ -2.12
CPNE3-213ENST00000622183 BVES-AS1Q5T3Y7 98 aa1.8□□□□□ -2.12
CPNE3-213ENST00000622183 OR2T2Q6IF00 324 aa1.8□□□□□ -2.12
CPNE3-213ENST00000622183 TMEM91Q6ZNR0 172 aa1.8□□□□□ -2.12
CPNE3-213ENST00000622183 KRTAP5-2Q701N4 177 aa1.8□□□□□ -2.12
CPNE3-213ENST00000622183 OR2T10Q8NGZ9 312 aa1.8□□□□□ -2.12
CPNE3-213ENST00000622183 VSTM2AQ8TAG5 236 aa1.8□□□□□ -2.12
CPNE3-213ENST00000622183 CKLFQ9UBR5 152 aa1.8□□□□□ -2.12
CPNE3-213ENST00000622183 V9GYH0 126 aa1.8□□□□□ -2.12
CPNE3-213ENST00000622183 HLA-DRB4X5D2U9 266 aa1.8□□□□□ -2.12
CPNE3-213ENST00000622183 EDC4Q6P2E9 1401 aaKnown RBP1.8□□□□□ -2.12
CPNE3-213ENST00000622183 AGLP35573 1532 aa1.8□□□□□ -2.12
CPNE3-213ENST00000622183 ZFHX2Q9C0A1 2572 aaPredicted RBP1.8□□□□□ -2.12
CPNE3-213ENST00000622183 E9PCH4 1651 aa1.8□□□□□ -2.12
CPNE3-213ENST00000622183 QSER1Q2KHR3 1735 aa1.8□□□□□ -2.12
CPNE3-213ENST00000622183 PKD1L3Q7Z443 1732 aa1.8□□□□□ -2.12
CPNE3-213ENST00000622183 TRAV13-1A0A0B4J241 112 aa1.79□□□□□ -2.12
CPNE3-213ENST00000622183 OOSP1A8MZH6 123 aa1.79□□□□□ -2.12
CPNE3-213ENST00000622183 CYB5AP00167 134 aa1.79□□□□□ -2.12
CPNE3-213ENST00000622183 MT-ND6P03923 174 aa1.79□□□□□ -2.12
CPNE3-213ENST00000622183 C9orf153Q5TBE3 101 aa1.79□□□□□ -2.12
CPNE3-213ENST00000622183 LINC00305Q7Z4B0 112 aa1.79□□□□□ -2.12
CPNE3-213ENST00000622183 SBSPONQ8IVN8 264 aa1.79□□□□□ -2.12
CPNE3-213ENST00000622183 MORN4Q8NDC4 146 aa1.79□□□□□ -2.12
CPNE3-213ENST00000622183 Q96M85 177 aa1.79□□□□□ -2.12
CPNE3-213ENST00000622183 SLC35B3Q9H1N7 401 aa1.79□□□□□ -2.12
CPNE3-213ENST00000622183 OSTCQ9NRP0 149 aa1.79□□□□□ -2.12
CPNE3-213ENST00000622183 PTPRMP28827 1452 aa1.79□□□□□ -2.12
CPNE3-213ENST00000622183 KIF21BO75037 1637 aa1.79□□□□□ -2.12
CPNE3-213ENST00000622183 LOC285556D6RIA3 1793 aa1.79□□□□□ -2.12
CPNE3-213ENST00000622183 MGAMO43451 1857 aa1.79□□□□□ -2.12
CPNE3-213ENST00000622183 PLXNA1Q9UIW2 1896 aa1.79□□□□□ -2.12
CPNE3-213ENST00000622183 MALRD1Q5VYJ5 2156 aa1.78□□□□□ -2.12
CPNE3-213ENST00000622183 EXPH5Q8NEV8 1989 aa1.78□□□□□ -2.12
CPNE3-213ENST00000622183 SHPRHQ149N8 1683 aa1.78□□□□□ -2.12
CPNE3-213ENST00000622183 LRP5O75197 1615 aa1.78□□□□□ -2.12
CPNE3-213ENST00000622183 C10orf71Q711Q0 1435 aa1.78□□□□□ -2.12
CPNE3-213ENST00000622183 A0A1W2PPM0 123 aa1.78□□□□□ -2.12
CPNE3-213ENST00000622183 NDUFB3O43676 98 aa1.78□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms