RNA–Protein interactions for RNA: ENST00000562540.1

DENND4A-205, Transcript of DENN domain containing 4A, humanhuman

TSL 2

Gene DENND4A, Length 629 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-205ENST00000562540 HLA-DRB4X5D2U9 266 aa-0.27□□□□□ -2.45
DENND4A-205ENST00000562540 MUC2Q02817 5179 aa-0.27□□□□□ -2.45
DENND4A-205ENST00000562540 PBRM1Q86U86 1689 aa-0.27□□□□□ -2.45
DENND4A-205ENST00000562540 WDR97A6NE52 1622 aa-0.27□□□□□ -2.45
DENND4A-205ENST00000562540 LAMC3Q9Y6N6 1575 aa-0.28□□□□□ -2.45
DENND4A-205ENST00000562540 CACNA1AO00555 2505 aa-0.28□□□□□ -2.45
DENND4A-205ENST00000562540 TRBV7-1A0A0A6YYK4 115 aa-0.28□□□□□ -2.45
DENND4A-205ENST00000562540 C10orf142B7Z368 130 aa-0.28□□□□□ -2.45
DENND4A-205ENST00000562540 YPEL1O60688 119 aa-0.28□□□□□ -2.45
DENND4A-205ENST00000562540 CMPK1P30085 196 aa-0.28□□□□□ -2.45
DENND4A-205ENST00000562540 ATP11AUNQ6ZP68 121 aa-0.28□□□□□ -2.45
DENND4A-205ENST00000562540 C4orf33Q8N1A6 199 aa-0.28□□□□□ -2.45
DENND4A-205ENST00000562540 MAGOHBQ96A72 148 aaKnown RBP-0.28□□□□□ -2.45
DENND4A-205ENST00000562540 TMEM242Q9NWH2 141 aa-0.28□□□□□ -2.45
DENND4A-205ENST00000562540 UNC13BO14795 1591 aa-0.28□□□□□ -2.45
DENND4A-205ENST00000562540 SPTBN1Q01082 2364 aaKnown RBP-0.29□□□□□ -2.46
DENND4A-205ENST00000562540 TRAV36DV7A0A075B6V5 113 aa-0.29□□□□□ -2.46
DENND4A-205ENST00000562540 S100A5P33763 92 aa-0.29□□□□□ -2.46
DENND4A-205ENST00000562540 KRTAP6-1Q3LI64 71 aa-0.29□□□□□ -2.46
DENND4A-205ENST00000562540 CLLU1Q5K131 121 aa-0.29□□□□□ -2.46
DENND4A-205ENST00000562540 FAM74A4Q5TZK3 123 aa-0.29□□□□□ -2.46
DENND4A-205ENST00000562540 GINS2Q9Y248 185 aa-0.29□□□□□ -2.46
DENND4A-205ENST00000562540 FLNAP21333 2647 aaKnown RBP-0.29□□□□□ -2.46
DENND4A-205ENST00000562540 CCDC179H3BU77 68 aa-0.3□□□□□ -2.46
DENND4A-205ENST00000562540 DEGS1O15121 323 aa-0.3□□□□□ -2.46
DENND4A-205ENST00000562540 TNFSF15O95150 251 aa-0.3□□□□□ -2.46
DENND4A-205ENST00000562540 SCTP09683 121 aa-0.3□□□□□ -2.46
DENND4A-205ENST00000562540 NEFHP12036 1026 aa-0.3□□□□□ -2.46
DENND4A-205ENST00000562540 CCL3L1P16619 93 aa-0.3□□□□□ -2.46
DENND4A-205ENST00000562540 SLC48A1Q6P1K1 146 aa-0.3□□□□□ -2.46
DENND4A-205ENST00000562540 TCTE3Q8IZS6 198 aa-0.3□□□□□ -2.46
DENND4A-205ENST00000562540 C20orf197Q8N268 126 aa-0.3□□□□□ -2.46
DENND4A-205ENST00000562540 SELENOSQ9BQE4 189 aa-0.3□□□□□ -2.46
DENND4A-205ENST00000562540 V9GYV3 84 aa-0.3□□□□□ -2.46
DENND4A-205ENST00000562540 MYH9P35579 1960 aaKnown RBP-0.31□□□□□ -2.46
DENND4A-205ENST00000562540 A0A087WTM6 91 aa-0.31□□□□□ -2.46
DENND4A-205ENST00000562540 A0A1B0GX51 115 aa-0.31□□□□□ -2.46
DENND4A-205ENST00000562540 ACYP2P14621 99 aa-0.31□□□□□ -2.46
DENND4A-205ENST00000562540 COX7B2Q8TF08 81 aa-0.31□□□□□ -2.46
DENND4A-205ENST00000562540 SPANXCQ9NY87 97 aa-0.31□□□□□ -2.46
DENND4A-205ENST00000562540 HIGD1AQ9Y241 93 aa-0.31□□□□□ -2.46
DENND4A-205ENST00000562540 UHRF1BP1LA0JNW5 1464 aa-0.31□□□□□ -2.46
DENND4A-205ENST00000562540 CDK5RAP2Q96SN8 1893 aa-0.32□□□□□ -2.46
DENND4A-205ENST00000562540 J3QLW9 94 aa-0.32□□□□□ -2.46
DENND4A-205ENST00000562540 CFDP00746 253 aaPredicted RBP-0.32□□□□□ -2.46
DENND4A-205ENST00000562540 NPC2P61916 151 aa-0.32□□□□□ -2.46
DENND4A-205ENST00000562540 SPCS2Q15005 226 aa-0.32□□□□□ -2.46
DENND4A-205ENST00000562540 Q6ZRX8 168 aa-0.32□□□□□ -2.46
DENND4A-205ENST00000562540 Q96NJ1 140 aa-0.32□□□□□ -2.46
DENND4A-205ENST00000562540 STAB1Q9NY15 2570 aa-0.32□□□□□ -2.46
DENND4A-205ENST00000562540 PARP14Q460N5 1801 aa-0.33□□□□□ -2.46
DENND4A-205ENST00000562540 PHIPQ8WWQ0 1821 aa-0.33□□□□□ -2.46
DENND4A-205ENST00000562540 M0R2P5 195 aa-0.33□□□□□ -2.46
DENND4A-205ENST00000562540 GCHFRP30047 84 aa-0.33□□□□□ -2.46
DENND4A-205ENST00000562540 SPANXA1Q9NS26 97 aa-0.33□□□□□ -2.46
DENND4A-205ENST00000562540 ZNF142P52746 1687 aaPredicted RBP-0.33□□□□□ -2.46
DENND4A-205ENST00000562540 HMCN2Q8NDA2 5059 aa-0.34□□□□□ -2.46
DENND4A-205ENST00000562540 TRAV12-3A0A0B4J271 114 aa-0.34□□□□□ -2.46
DENND4A-205ENST00000562540 SSC5DA1L4H1 1573 aa-0.34□□□□□ -2.46
DENND4A-205ENST00000562540 TMEM14DPA8MWL7 114 aa-0.34□□□□□ -2.46
DENND4A-205ENST00000562540 MAP1BP46821 2468 aaKnown RBP-0.34□□□□□ -2.46
DENND4A-205ENST00000562540 PIEZO2Q9H5I5 2752 aa-0.34□□□□□ -2.46
DENND4A-205ENST00000562540 LSM2Q9Y333 95 aaKnown RBP-0.34□□□□□ -2.46
DENND4A-205ENST00000562540 TENM4Q6N022 2769 aa-0.34□□□□□ -2.46
DENND4A-205ENST00000562540 PCLOQ9Y6V0 5065 aa-0.35□□□□□ -2.47
DENND4A-205ENST00000562540 TRGV1A0A0A0MS02 117 aa-0.35□□□□□ -2.47
DENND4A-205ENST00000562540 GNG14A0A1W2PPG7 69 aa-0.35□□□□□ -2.47
DENND4A-205ENST00000562540 DBIP07108 87 aaKnown RBP-0.35□□□□□ -2.47
DENND4A-205ENST00000562540 NBEAP1P0C6P0 100 aa-0.35□□□□□ -2.47
DENND4A-205ENST00000562540 INSL4Q14641 139 aa-0.35□□□□□ -2.47
DENND4A-205ENST00000562540 CCDC153Q494R4 210 aa-0.35□□□□□ -2.47
DENND4A-205ENST00000562540 BATF3Q9NR55 127 aa-0.35□□□□□ -2.47
DENND4A-205ENST00000562540 SCP2D1Q9UJQ7 156 aa-0.35□□□□□ -2.47
DENND4A-205ENST00000562540 PKD1L1Q8TDX9 2849 aa-0.35□□□□□ -2.47
DENND4A-205ENST00000562540 KDM5CP41229 1560 aa-0.36□□□□□ -2.47
DENND4A-205ENST00000562540 MYH6P13533 1939 aa-0.36□□□□□ -2.47
DENND4A-205ENST00000562540 NCS1P62166 190 aa-0.36□□□□□ -2.47
DENND4A-205ENST00000562540 UBE2DNLQ8IWF7 75 aa-0.36□□□□□ -2.47
DENND4A-205ENST00000562540 NDUFA12Q9UI09 145 aa-0.36□□□□□ -2.47
DENND4A-205ENST00000562540 APC2O95996 2303 aa-0.37□□□□□ -2.47
DENND4A-205ENST00000562540 H0YJX3 145 aa-0.37□□□□□ -2.47
DENND4A-205ENST00000562540 LINC01545Q5VT33 79 aa-0.37□□□□□ -2.47
DENND4A-205ENST00000562540 SSBP3-AS1Q7Z2R9 100 aa-0.37□□□□□ -2.47
DENND4A-205ENST00000562540 MMGT1Q8N4V1 131 aa-0.37□□□□□ -2.47
DENND4A-205ENST00000562540 KMT2CQ8NEZ4 4911 aaKnown RBP-0.37□□□□□ -2.47
DENND4A-205ENST00000562540 ARFGEF1Q9Y6D6 1849 aa-0.37□□□□□ -2.47
DENND4A-205ENST00000562540 PTPRMP28827 1452 aa-0.37□□□□□ -2.47
DENND4A-205ENST00000562540 DCHS2Q6V1P9 2916 aa-0.37□□□□□ -2.47
DENND4A-205ENST00000562540 USF3Q68DE3 2245 aa-0.38□□□□□ -2.47
DENND4A-205ENST00000562540 TRBV20-1A0A075B6N2 111 aa-0.38□□□□□ -2.47
DENND4A-205ENST00000562540 A0A0D9SFI3 127 aa-0.38□□□□□ -2.47
DENND4A-205ENST00000562540 ZNF815PA8K554 130 aa-0.38□□□□□ -2.47
DENND4A-205ENST00000562540 CYP4F30PQ9H0H9 118 aa-0.38□□□□□ -2.47
DENND4A-205ENST00000562540 SAR1AQ9NR31 198 aa-0.38□□□□□ -2.47
DENND4A-205ENST00000562540 CSPG4Q6UVK1 2322 aa-0.38□□□□□ -2.47
DENND4A-205ENST00000562540 NRXN2Q9P2S2 1712 aa-0.38□□□□□ -2.47
DENND4A-205ENST00000562540 WNK1Q9H4A3 2382 aa-0.39□□□□□ -2.47
DENND4A-205ENST00000562540 CHD6Q8TD26 2715 aa-0.39□□□□□ -2.47
DENND4A-205ENST00000562540 A6NIN4 97 aa-0.39□□□□□ -2.47
DENND4A-205ENST00000562540 EDDM3BP56851 147 aa-0.39□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 115.2 ms