RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 TMEM223A0PJW6 202 aa2.87□□□□□ -1.95
HMGB1P21-201ENST00000502313 A6NED7 52 aa2.87□□□□□ -1.95
HMGB1P21-201ENST00000502313 UMAD1C9J7I0 102 aa2.87□□□□□ -1.95
HMGB1P21-201ENST00000502313 BUB1B-PAK6H3BSN5 160 aa2.87□□□□□ -1.95
HMGB1P21-201ENST00000502313 BCL2L11O43521 198 aa2.87□□□□□ -1.95
HMGB1P21-201ENST00000502313 KRASP01116 189 aa2.87□□□□□ -1.95
HMGB1P21-201ENST00000502313 IGKV1D-33P01593 117 aa2.87□□□□□ -1.95
HMGB1P21-201ENST00000502313 IGKV1-33P01594 117 aa2.87□□□□□ -1.95
HMGB1P21-201ENST00000502313 TRGC2P03986 189 aa2.87□□□□□ -1.95
HMGB1P21-201ENST00000502313 SCTP09683 121 aa2.87□□□□□ -1.95
HMGB1P21-201ENST00000502313 PTHLHP12272 177 aa2.87□□□□□ -1.95
HMGB1P21-201ENST00000502313 EDDM3BP56851 147 aa2.87□□□□□ -1.95
HMGB1P21-201ENST00000502313 FXYD4P59646 89 aa2.87□□□□□ -1.95
HMGB1P21-201ENST00000502313 CCL8P80075 99 aa2.87□□□□□ -1.95
HMGB1P21-201ENST00000502313 ZNF345Q14585 488 aa2.87□□□□□ -1.95
HMGB1P21-201ENST00000502313 RTL8BQ17RB0 113 aa2.87□□□□□ -1.95
HMGB1P21-201ENST00000502313 C15orf32Q32M92 178 aa2.87□□□□□ -1.95
HMGB1P21-201ENST00000502313 LGALS9BQ3B8N2 356 aa2.87□□□□□ -1.95
HMGB1P21-201ENST00000502313 LGALSLQ3ZCW2 172 aaPredicted RBP2.87□□□□□ -1.95
HMGB1P21-201ENST00000502313 Q5XG85 94 aa2.87□□□□□ -1.95
HMGB1P21-201ENST00000502313 LGALS9CQ6DKI2 356 aa2.87□□□□□ -1.95
HMGB1P21-201ENST00000502313 SLC25A34Q6PIV7 304 aa2.87□□□□□ -1.95
HMGB1P21-201ENST00000502313 SPATA12Q7Z6I5 190 aa2.87□□□□□ -1.95
HMGB1P21-201ENST00000502313 VSTM2AQ8TAG5 236 aa2.87□□□□□ -1.95
HMGB1P21-201ENST00000502313 RNF5Q99942 180 aa2.87□□□□□ -1.95
HMGB1P21-201ENST00000502313 GFRA4Q9GZZ7 299 aa2.87□□□□□ -1.95
HMGB1P21-201ENST00000502313 FXYD6Q9H0Q3 95 aa2.87□□□□□ -1.95
HMGB1P21-201ENST00000502313 SMDT1Q9H4I9 107 aa2.87□□□□□ -1.95
HMGB1P21-201ENST00000502313 CBLN4Q9NTU7 201 aa2.87□□□□□ -1.95
HMGB1P21-201ENST00000502313 TMEM106BQ9NUM4 274 aa2.87□□□□□ -1.95
HMGB1P21-201ENST00000502313 COA4Q9NYJ1 87 aa2.87□□□□□ -1.95
HMGB1P21-201ENST00000502313 ZNRD1Q9P1U0 126 aa2.87□□□□□ -1.95
HMGB1P21-201ENST00000502313 KAAG1Q9UBP8 84 aa2.87□□□□□ -1.95
HMGB1P21-201ENST00000502313 FUT9Q9Y231 359 aa2.87□□□□□ -1.95
HMGB1P21-201ENST00000502313 FBN3Q75N90 2809 aa2.87□□□□□ -1.95
HMGB1P21-201ENST00000502313 IGHV3-21A0A0B4J1V1 117 aa2.86□□□□□ -1.95
HMGB1P21-201ENST00000502313 IGHV1-3A0A0C4DH29 117 aa2.86□□□□□ -1.95
HMGB1P21-201ENST00000502313 ODAMA1E959 279 aa2.86□□□□□ -1.95
HMGB1P21-201ENST00000502313 J3QQQ9 107 aa2.86□□□□□ -1.95
HMGB1P21-201ENST00000502313 TAX1BP3O14907 124 aa2.86□□□□□ -1.95
HMGB1P21-201ENST00000502313 UBE2L6O14933 153 aa2.86□□□□□ -1.95
HMGB1P21-201ENST00000502313 RBFOX2O43251 390 aaKnown RBP eCLIP2.86□□□□□ -1.95
HMGB1P21-201ENST00000502313 IFNA10P01566 189 aa2.86□□□□□ -1.95
HMGB1P21-201ENST00000502313 IGHV1-46P01743 117 aa2.86□□□□□ -1.95
HMGB1P21-201ENST00000502313 NFYBP25208 207 aa2.86□□□□□ -1.95
HMGB1P21-201ENST00000502313 SNCAP37840 140 aa2.86□□□□□ -1.95
HMGB1P21-201ENST00000502313 UBA52P62987 128 aaKnown RBP2.86□□□□□ -1.95
HMGB1P21-201ENST00000502313 ERHP84090 104 aaKnown RBP2.86□□□□□ -1.95
HMGB1P21-201ENST00000502313 SERF2P84101 59 aa2.86□□□□□ -1.95
HMGB1P21-201ENST00000502313 FAM104BQ5XKR9 115 aa2.86□□□□□ -1.95
HMGB1P21-201ENST00000502313 ZNF660Q6AZW8 331 aaPredicted RBP2.86□□□□□ -1.95
HMGB1P21-201ENST00000502313 KCNRGQ8N5I3 272 aa2.86□□□□□ -1.95
HMGB1P21-201ENST00000502313 RPP25LQ8N5L8 163 aaKnown RBP2.86□□□□□ -1.95
HMGB1P21-201ENST00000502313 DEFB108BQ8NET1 73 aa2.86□□□□□ -1.95
HMGB1P21-201ENST00000502313 LINC01560Q8TB33 94 aa2.86□□□□□ -1.95
HMGB1P21-201ENST00000502313 TP53RKQ96S44 253 aa2.86□□□□□ -1.95
HMGB1P21-201ENST00000502313 ZNF471Q9BX82 626 aaPredicted RBP2.86□□□□□ -1.95
HMGB1P21-201ENST00000502313 LINC00574Q9H8X3 128 aa2.86□□□□□ -1.95
HMGB1P21-201ENST00000502313 OTORQ9NRC9 128 aa2.86□□□□□ -1.95
HMGB1P21-201ENST00000502313 IL36BQ9NZH7 164 aa2.86□□□□□ -1.95
HMGB1P21-201ENST00000502313 LAMTOR3Q9UHA4 124 aa2.86□□□□□ -1.95
HMGB1P21-201ENST00000502313 LINC00312Q9Y6C7 94 aa2.86□□□□□ -1.95
HMGB1P21-201ENST00000502313 MED13LQ71F56 2210 aa2.86□□□□□ -1.95
HMGB1P21-201ENST00000502313 HEATR1Q9H583 2144 aaKnown RBP2.86□□□□□ -1.95
HMGB1P21-201ENST00000502313 HIVEP2P31629 2446 aa2.85□□□□□ -1.95
HMGB1P21-201ENST00000502313 AGRNO00468 2067 aa2.85□□□□□ -1.95
HMGB1P21-201ENST00000502313 NBEAL1Q6ZS30 2694 aa2.85□□□□□ -1.95
HMGB1P21-201ENST00000502313 A0A096LNT2 108 aa2.85□□□□□ -1.95
HMGB1P21-201ENST00000502313 TRAV5A0A0B4J249 113 aa2.85□□□□□ -1.95
HMGB1P21-201ENST00000502313 E7EQL1 145 aa2.85□□□□□ -1.95
HMGB1P21-201ENST00000502313 C17orf112F2Z3M2 114 aa2.85□□□□□ -1.95
HMGB1P21-201ENST00000502313 M0R2Z0 102 aa2.85□□□□□ -1.95
HMGB1P21-201ENST00000502313 SYNGR2O43760 224 aa2.85□□□□□ -1.95
HMGB1P21-201ENST00000502313 SIX6O95475 246 aa2.85□□□□□ -1.95
HMGB1P21-201ENST00000502313 IFNA17P01571 189 aa2.85□□□□□ -1.95
HMGB1P21-201ENST00000502313 RBP4P02753 201 aa2.85□□□□□ -1.95
HMGB1P21-201ENST00000502313 PRH1P02810 166 aa2.85□□□□□ -1.95
HMGB1P21-201ENST00000502313 SMIM6P0DI80 62 aa2.85□□□□□ -1.95
HMGB1P21-201ENST00000502313 COX6B1P14854 86 aa2.85□□□□□ -1.95
HMGB1P21-201ENST00000502313 NTF3P20783 257 aa2.85□□□□□ -1.95
HMGB1P21-201ENST00000502313 ATP6V0CP27449 155 aa2.85□□□□□ -1.95
HMGB1P21-201ENST00000502313 BRS3P32247 399 aa2.85□□□□□ -1.95
HMGB1P21-201ENST00000502313 CSN1S1P47710 185 aa2.85□□□□□ -1.95
HMGB1P21-201ENST00000502313 EFNA4P52798 201 aa2.85□□□□□ -1.95
HMGB1P21-201ENST00000502313 AKR1C2P52895 323 aa2.85□□□□□ -1.95
HMGB1P21-201ENST00000502313 S100A10P60903 97 aa2.85□□□□□ -1.95
HMGB1P21-201ENST00000502313 CCL20P78556 96 aa2.85□□□□□ -1.95
HMGB1P21-201ENST00000502313 PEA15Q15121 130 aa2.85□□□□□ -1.95
HMGB1P21-201ENST00000502313 HMGN3Q15651 99 aa2.85□□□□□ -1.95
HMGB1P21-201ENST00000502313 RRN3P1Q2M238 152 aa2.85□□□□□ -1.95
HMGB1P21-201ENST00000502313 MRPL51Q4U2R6 128 aaKnown RBP2.85□□□□□ -1.95
HMGB1P21-201ENST00000502313 TMEM155Q4W5P6 130 aa2.85□□□□□ -1.95
HMGB1P21-201ENST00000502313 CLLU1Q5K131 121 aa2.85□□□□□ -1.95
HMGB1P21-201ENST00000502313 AMTNQ6UX39 209 aa2.85□□□□□ -1.95
HMGB1P21-201ENST00000502313 DPPA3Q6W0C5 159 aa2.85□□□□□ -1.95
HMGB1P21-201ENST00000502313 HEPN1Q6WQI6 88 aa2.85□□□□□ -1.95
HMGB1P21-201ENST00000502313 ZNF826PQ6ZT77 177 aa2.85□□□□□ -1.95
HMGB1P21-201ENST00000502313 LYZL2Q7Z4W2 148 aa2.85□□□□□ -1.95
HMGB1P21-201ENST00000502313 PRR15Q8IV56 129 aa2.85□□□□□ -1.95
HMGB1P21-201ENST00000502313 C11orf42Q8N5U0 333 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms