RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 AEBP2Q6ZN18 517 aaPredicted RBP14.93□□□□□ -0.02
HMGB1P21-201ENST00000502313 CHIC1Q5VXU3 224 aa14.48□□□□□ -0.09
HMGB1P21-201ENST00000502313 PHF23Q9BUL5 403 aaPredicted RBP12.67□□□□□ -0.38
HMGB1P21-201ENST00000502313 SENP3Q9H4L4 574 aaPredicted RBP12.54□□□□□ -0.4
HMGB1P21-201ENST00000502313 PLPPR3Q6T4P5 718 aa12.03□□□□□ -0.48
HMGB1P21-201ENST00000502313 FOXD1Q16676 465 aa11.82□□□□□ -0.52
HMGB1P21-201ENST00000502313 PPP6R1Q9UPN7 881 aa11.15□□□□□ -0.62
HMGB1P21-201ENST00000502313 ADRA2BP18089 450 aa11.14□□□□□ -0.63
HMGB1P21-201ENST00000502313 PIAS4Q8N2W9 510 aaPredicted RBP10.95□□□□□ -0.66
HMGB1P21-201ENST00000502313 MSH5O43196 834 aa10.89□□□□□ -0.67
HMGB1P21-201ENST00000502313 KCNA4P22459 653 aa10.8□□□□□ -0.68
HMGB1P21-201ENST00000502313 POTEDQ86YR6 584 aa10.71□□□□□ -0.69
HMGB1P21-201ENST00000502313 EHMT2Q96KQ7 1210 aa10.66□□□□□ -0.7
HMGB1P21-201ENST00000502313 PPP4R3CPQ6ZMV5 832 aa10.61□□□□□ -0.71
HMGB1P21-201ENST00000502313 NCBP3Q53F19 620 aaKnown RBP10.57□□□□□ -0.72
HMGB1P21-201ENST00000502313 SLC4A1APQ9BWU0 796 aaKnown RBP10.45□□□□□ -0.74
HMGB1P21-201ENST00000502313 SCAF1Q9H7N4 1312 aaKnown RBP10.36□□□□□ -0.75
HMGB1P21-201ENST00000502313 NPM3O75607 178 aaKnown RBP10.26□□□□□ -0.77
HMGB1P21-201ENST00000502313 CNKSR2Q8WXI2 1034 aa10.24□□□□□ -0.77
HMGB1P21-201ENST00000502313 MAPK8IP2Q13387 824 aaPredicted RBP10.19□□□□□ -0.78
HMGB1P21-201ENST00000502313 CSRNP3Q8WYN3 585 aa10.19□□□□□ -0.78
HMGB1P21-201ENST00000502313 DMRT2Q9Y5R5 561 aa10.01□□□□□ -0.81
HMGB1P21-201ENST00000502313 RNF216Q9NWF9 866 aaPredicted RBP9.92□□□□□ -0.82
HMGB1P21-201ENST00000502313 FOXD4L1Q9NU39 408 aa9.89□□□□□ -0.83
HMGB1P21-201ENST00000502313 ZBTB22O15209 634 aa9.87□□□□□ -0.83
HMGB1P21-201ENST00000502313 SLC24A1O60721 1099 aa9.83□□□□□ -0.84
HMGB1P21-201ENST00000502313 DNAJC5BQ9UF47 199 aa9.82□□□□□ -0.84
HMGB1P21-201ENST00000502313 HOXD11P31277 338 aaPredicted RBP9.71□□□□□ -0.86
HMGB1P21-201ENST00000502313 MYCNP04198 464 aaPredicted RBP9.57□□□□□ -0.88
HMGB1P21-201ENST00000502313 DCAF8L1A6NGE4 600 aa9.52□□□□□ -0.89
HMGB1P21-201ENST00000502313 SLC4A2P04920 1241 aa9.52□□□□□ -0.89
HMGB1P21-201ENST00000502313 ATXN8OSP0DMR3 200 aa9.5□□□□□ -0.89
HMGB1P21-201ENST00000502313 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.42□□□□□ -0.9
HMGB1P21-201ENST00000502313 RNF39Q9H2S5 420 aa9.4□□□□□ -0.9
HMGB1P21-201ENST00000502313 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.37□□□□□ -0.91
HMGB1P21-201ENST00000502313 HNRNPUL2Q1KMD3 747 aaKnown RBP9.37□□□□□ -0.91
HMGB1P21-201ENST00000502313 CACNB1Q02641 598 aaPredicted RBP9.36□□□□□ -0.91
HMGB1P21-201ENST00000502313 RTN4Q9NQC3 1192 aaKnown RBP9.33□□□□□ -0.92
HMGB1P21-201ENST00000502313 SAMD1Q6SPF0 538 aaPredicted RBP9.32□□□□□ -0.92
HMGB1P21-201ENST00000502313 FKBP8Q14318 412 aa9.31□□□□□ -0.92
HMGB1P21-201ENST00000502313 AMER1Q5JTC6 1135 aaPredicted RBP9.27□□□□□ -0.93
HMGB1P21-201ENST00000502313 APLP2Q06481 763 aa9.23□□□□□ -0.93
HMGB1P21-201ENST00000502313 C1QBPQ07021 282 aaKnown RBP9.19□□□□□ -0.94
HMGB1P21-201ENST00000502313 U3KPZ7 1027 aaPredicted RBP9.17□□□□□ -0.94
HMGB1P21-201ENST00000502313 ATF5Q9Y2D1 282 aaPredicted RBP9.13□□□□□ -0.95
HMGB1P21-201ENST00000502313 ZNF219Q9P2Y4 722 aaPredicted RBP9.05□□□□□ -0.96
HMGB1P21-201ENST00000502313 FBLN2P98095 1184 aa8.95□□□□□ -0.98
HMGB1P21-201ENST00000502313 FBXO3Q9UK99 471 aa8.94□□□□□ -0.98
HMGB1P21-201ENST00000502313 TRHP20396 242 aaPredicted RBP8.92□□□□□ -0.98
HMGB1P21-201ENST00000502313 SPINK5Q9NQ38 1064 aaPredicted RBP8.92□□□□□ -0.98
HMGB1P21-201ENST00000502313 SPDYE4A6NLX3 237 aa8.9□□□□□ -0.98
HMGB1P21-201ENST00000502313 CAPN15O75808 1086 aa8.87□□□□□ -0.99
HMGB1P21-201ENST00000502313 DSG3P32926 999 aa8.83□□□□□ -1
HMGB1P21-201ENST00000502313 POLA2Q14181 598 aa8.8□□□□□ -1
HMGB1P21-201ENST00000502313 ZBTB12Q9Y330 459 aaPredicted RBP8.8□□□□□ -1
HMGB1P21-201ENST00000502313 MKRN4PQ13434 485 aaPredicted RBP8.76□□□□□ -1.01
HMGB1P21-201ENST00000502313 VASPP50552 380 aaPredicted RBP8.72□□□□□ -1.01
HMGB1P21-201ENST00000502313 PRKCSHP14314 528 aaPredicted RBP8.7□□□□□ -1.02
HMGB1P21-201ENST00000502313 ABCB7O75027 752 aa8.69□□□□□ -1.02
HMGB1P21-201ENST00000502313 DCAF8L2P0C7V8 631 aa8.68□□□□□ -1.02
HMGB1P21-201ENST00000502313 PROM2Q8N271 834 aa8.67□□□□□ -1.02
HMGB1P21-201ENST00000502313 KLHL34Q8N239 644 aa8.59□□□□□ -1.03
HMGB1P21-201ENST00000502313 ZNF692Q9BU19 519 aaPredicted RBP8.57□□□□□ -1.04
HMGB1P21-201ENST00000502313 IFNLR1Q8IU57 520 aaPredicted RBP8.56□□□□□ -1.04
HMGB1P21-201ENST00000502313 SPDYE2BA6NHP3 402 aa8.53□□□□□ -1.04
HMGB1P21-201ENST00000502313 SPDYE6P0CI01 402 aa8.53□□□□□ -1.04
HMGB1P21-201ENST00000502313 SPDYE2Q495Y8 402 aa8.53□□□□□ -1.04
HMGB1P21-201ENST00000502313 STAG3Q9UJ98 1225 aa8.53□□□□□ -1.04
HMGB1P21-201ENST00000502313 PLCD3Q8N3E9 789 aa8.52□□□□□ -1.05
HMGB1P21-201ENST00000502313 PLEKHG5O94827 1062 aa8.51□□□□□ -1.05
HMGB1P21-201ENST00000502313 OSCARQ8IYS5 282 aa8.5□□□□□ -1.05
HMGB1P21-201ENST00000502313 SPOCK2Q92563 424 aa8.5□□□□□ -1.05
HMGB1P21-201ENST00000502313 PLCB2Q00722 1185 aa8.49□□□□□ -1.05
HMGB1P21-201ENST00000502313 TAOK2Q9UL54 1235 aa8.48□□□□□ -1.05
HMGB1P21-201ENST00000502313 HAP1P54257 671 aaPredicted RBP8.46□□□□□ -1.06
HMGB1P21-201ENST00000502313 PABPN1Q86U42 306 aaKnown RBP eCLIP8.46□□□□□ -1.06
HMGB1P21-201ENST00000502313 BCANQ96GW7 911 aa8.46□□□□□ -1.06
HMGB1P21-201ENST00000502313 MIER1Q8N108 512 aa8.44□□□□□ -1.06
HMGB1P21-201ENST00000502313 ECM2O94769 699 aaPredicted RBP8.43□□□□□ -1.06
HMGB1P21-201ENST00000502313 DAXXQ9UER7 740 aaPredicted RBP8.43□□□□□ -1.06
HMGB1P21-201ENST00000502313 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.42□□□□□ -1.06
HMGB1P21-201ENST00000502313 ZBTB47Q9UFB7 747 aaPredicted RBP8.42□□□□□ -1.06
HMGB1P21-201ENST00000502313 SSUH2Q9Y2M2 353 aa8.42□□□□□ -1.06
HMGB1P21-201ENST00000502313 PKD2Q13563 968 aa8.41□□□□□ -1.06
HMGB1P21-201ENST00000502313 TPRNQ4KMQ1 711 aa8.37□□□□□ -1.07
HMGB1P21-201ENST00000502313 POTEHQ6S545 545 aa8.36□□□□□ -1.07
HMGB1P21-201ENST00000502313 CIZ1Q9ULV3 898 aaPredicted RBP8.35□□□□□ -1.07
HMGB1P21-201ENST00000502313 BBXQ8WY36 941 aaPredicted RBP8.31□□□□□ -1.08
HMGB1P21-201ENST00000502313 TIMELESSQ9UNS1 1208 aa8.3□□□□□ -1.08
HMGB1P21-201ENST00000502313 CFAP44Q96MT7 982 aa8.28□□□□□ -1.08
HMGB1P21-201ENST00000502313 PAXIP1Q6ZW49 1069 aaPredicted RBP8.27□□□□□ -1.09
HMGB1P21-201ENST00000502313 VSIG10Q8N0Z9 540 aa8.27□□□□□ -1.09
HMGB1P21-201ENST00000502313 TRIM41Q8WV44 630 aa8.27□□□□□ -1.09
HMGB1P21-201ENST00000502313 RBM42Q9BTD8 480 aaKnown RBP8.26□□□□□ -1.09
HMGB1P21-201ENST00000502313 TULP1O00294 542 aaPredicted RBP8.24□□□□□ -1.09
HMGB1P21-201ENST00000502313 RGL2O15211 777 aa8.24□□□□□ -1.09
HMGB1P21-201ENST00000502313 ARXQ96QS3 562 aa8.23□□□□□ -1.09
HMGB1P21-201ENST00000502313 NISCHQ9Y2I1 1504 aa8.22□□□□□ -1.09
HMGB1P21-201ENST00000502313 CHGAP10645 457 aaKnown RBP8.21□□□□□ -1.1
HMGB1P21-201ENST00000502313 GSE1Q14687 1217 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms