RNA–Protein interactions for RNA: ENST00000471635.5

RBM39-228, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-228ENST00000471635 KIF13AQ9H1H9 1805 aa-0.54□□□□□ -2.5
RBM39-228ENST00000471635 MYCBP2O75592 4640 aa-0.55□□□□□ -2.5
RBM39-228ENST00000471635 AKAP11Q9UKA4 1901 aa-0.55□□□□□ -2.5
RBM39-228ENST00000471635 J3KT08 172 aa-0.55□□□□□ -2.5
RBM39-228ENST00000471635 PAEPP09466 180 aa-0.55□□□□□ -2.5
RBM39-228ENST00000471635 HLA-DRB4P13762 266 aa-0.55□□□□□ -2.5
RBM39-228ENST00000471635 SSBP1Q04837 148 aaKnown RBP-0.55□□□□□ -2.5
RBM39-228ENST00000471635 Q6ZRX8 168 aa-0.55□□□□□ -2.5
RBM39-228ENST00000471635 OR8I2Q8N0Y5 310 aa-0.55□□□□□ -2.5
RBM39-228ENST00000471635 ATP6V0E2Q8NHE4 81 aa-0.55□□□□□ -2.5
RBM39-228ENST00000471635 BANF2Q9H503 90 aa-0.55□□□□□ -2.5
RBM39-228ENST00000471635 CALML5Q9NZT1 146 aa-0.55□□□□□ -2.5
RBM39-228ENST00000471635 NOP16Q9Y3C1 178 aaKnown RBP-0.55□□□□□ -2.5
RBM39-228ENST00000471635 HLA-DRB4X5D2U9 266 aa-0.55□□□□□ -2.5
RBM39-228ENST00000471635 C2CD3Q4AC94 2353 aa-0.55□□□□□ -2.5
RBM39-228ENST00000471635 UHRF1BP1LA0JNW5 1464 aa-0.55□□□□□ -2.5
RBM39-228ENST00000471635 PKDREJQ9NTG1 2253 aa-0.55□□□□□ -2.5
RBM39-228ENST00000471635 TRBV7-1A0A0A6YYK4 115 aa-0.56□□□□□ -2.5
RBM39-228ENST00000471635 S100GP29377 79 aa-0.56□□□□□ -2.5
RBM39-228ENST00000471635 RPS28P62857 69 aaKnown RBP-0.56□□□□□ -2.5
RBM39-228ENST00000471635 TMEM244Q5VVB8 128 aa-0.56□□□□□ -2.5
RBM39-228ENST00000471635 C20orf197Q8N268 126 aa-0.56□□□□□ -2.5
RBM39-228ENST00000471635 COX7B2Q8TF08 81 aa-0.56□□□□□ -2.5
RBM39-228ENST00000471635 TRAV36DV7A0A075B6V5 113 aa-0.57□□□□□ -2.5
RBM39-228ENST00000471635 CFDP00746 253 aaPredicted RBP-0.57□□□□□ -2.5
RBM39-228ENST00000471635 ACYP2P14621 99 aa-0.57□□□□□ -2.5
RBM39-228ENST00000471635 SLC48A1Q6P1K1 146 aa-0.57□□□□□ -2.5
RBM39-228ENST00000471635 DDA1Q9BW61 102 aa-0.57□□□□□ -2.5
RBM39-228ENST00000471635 ERG28Q9UKR5 140 aa-0.57□□□□□ -2.5
RBM39-228ENST00000471635 V9GYQ6 96 aa-0.57□□□□□ -2.5
RBM39-228ENST00000471635 PHIPQ8WWQ0 1821 aa-0.57□□□□□ -2.5
RBM39-228ENST00000471635 ARAP1Q96P48 1450 aa-0.58□□□□□ -2.5
RBM39-228ENST00000471635 TMEM14DPA8MWL7 114 aa-0.58□□□□□ -2.5
RBM39-228ENST00000471635 SMIM24O75264 130 aa-0.58□□□□□ -2.5
RBM39-228ENST00000471635 INSL4Q14641 139 aa-0.58□□□□□ -2.5
RBM39-228ENST00000471635 CLLU1Q5K131 121 aa-0.58□□□□□ -2.5
RBM39-228ENST00000471635 V9GYV3 84 aa-0.58□□□□□ -2.5
RBM39-228ENST00000471635 CHD6Q8TD26 2715 aa-0.58□□□□□ -2.5
RBM39-228ENST00000471635 GOLGA3Q08378 1498 aa-0.59□□□□□ -2.5
RBM39-228ENST00000471635 TRGV1A0A0A0MS02 117 aa-0.59□□□□□ -2.5
RBM39-228ENST00000471635 BORCS7-ASMTA0A0B4J1R7 106 aa-0.59□□□□□ -2.5
RBM39-228ENST00000471635 TRAV12-3A0A0B4J271 114 aa-0.59□□□□□ -2.5
RBM39-228ENST00000471635 A0A1B0GX51 115 aa-0.59□□□□□ -2.5
RBM39-228ENST00000471635 ZNF815PA8K554 130 aa-0.59□□□□□ -2.5
RBM39-228ENST00000471635 J3QLW9 94 aa-0.59□□□□□ -2.5
RBM39-228ENST00000471635 TNFSF15O95150 251 aa-0.59□□□□□ -2.5
RBM39-228ENST00000471635 RBP4P02753 201 aa-0.59□□□□□ -2.5
RBM39-228ENST00000471635 SPRR2DP22532 72 aa-0.59□□□□□ -2.5
RBM39-228ENST00000471635 GCHFRP30047 84 aa-0.59□□□□□ -2.5
RBM39-228ENST00000471635 SPCS2Q15005 226 aa-0.59□□□□□ -2.5
RBM39-228ENST00000471635 FAM74A4Q5TZK3 123 aa-0.59□□□□□ -2.5
RBM39-228ENST00000471635 ATP11AUNQ6ZP68 121 aa-0.59□□□□□ -2.5
RBM39-228ENST00000471635 SSBP3-AS1Q7Z2R9 100 aa-0.59□□□□□ -2.5
RBM39-228ENST00000471635 SKA2Q8WVK7 121 aaPredicted RBP-0.59□□□□□ -2.5
RBM39-228ENST00000471635 CYP4F30PQ9H0H9 118 aa-0.59□□□□□ -2.5
RBM39-228ENST00000471635 LSM2Q9Y333 95 aaKnown RBP-0.59□□□□□ -2.5
RBM39-228ENST00000471635 PKD1L1Q8TDX9 2849 aa-0.6□□□□□ -2.5
RBM39-228ENST00000471635 G3V318 75 aa-0.6□□□□□ -2.51
RBM39-228ENST00000471635 CCDC179H3BU77 68 aa-0.6□□□□□ -2.51
RBM39-228ENST00000471635 DEGS1O15121 323 aa-0.6□□□□□ -2.51
RBM39-228ENST00000471635 SCTP09683 121 aa-0.6□□□□□ -2.51
RBM39-228ENST00000471635 UBE2DNLQ8IWF7 75 aa-0.6□□□□□ -2.51
RBM39-228ENST00000471635 HIGD1AQ9Y241 93 aa-0.6□□□□□ -2.51
RBM39-228ENST00000471635 BIVM-ERCC5R4GMW8 1640 aa-0.6□□□□□ -2.51
RBM39-228ENST00000471635 ZANQ9Y493 2812 aa-0.6□□□□□ -2.51
RBM39-228ENST00000471635 NRXN2Q9P2S2 1712 aa-0.61□□□□□ -2.51
RBM39-228ENST00000471635 HECTD4Q9Y4D8 3996 aa-0.61□□□□□ -2.51
RBM39-228ENST00000471635 M0R2P5 195 aa-0.61□□□□□ -2.51
RBM39-228ENST00000471635 KRTAP19-7Q3SYF9 63 aa-0.61□□□□□ -2.51
RBM39-228ENST00000471635 TCTE3Q8IZS6 198 aa-0.61□□□□□ -2.51
RBM39-228ENST00000471635 GINS2Q9Y248 185 aa-0.61□□□□□ -2.51
RBM39-228ENST00000471635 ERCC6Q03468 1493 aa-0.61□□□□□ -2.51
RBM39-228ENST00000471635 APC2O95996 2303 aa-0.62□□□□□ -2.51
RBM39-228ENST00000471635 NHSL1Q5SYE7 1610 aa-0.62□□□□□ -2.51
RBM39-228ENST00000471635 TSTD3H0UI37 97 aa-0.62□□□□□ -2.51
RBM39-228ENST00000471635 YPEL1O60688 119 aa-0.62□□□□□ -2.51
RBM39-228ENST00000471635 CMPK1P30085 196 aa-0.62□□□□□ -2.51
RBM39-228ENST00000471635 BATF3Q9NR55 127 aa-0.62□□□□□ -2.51
RBM39-228ENST00000471635 PRO0255Q9UI72 69 aa-0.62□□□□□ -2.51
RBM39-228ENST00000471635 MAP1BP46821 2468 aaKnown RBP-0.62□□□□□ -2.51
RBM39-228ENST00000471635 TNXBP22105 4242 aa-0.63□□□□□ -2.51
RBM39-228ENST00000471635 DCHS2Q6V1P9 2916 aa-0.63□□□□□ -2.51
RBM39-228ENST00000471635 SPTBN1Q01082 2364 aaKnown RBP-0.63□□□□□ -2.51
RBM39-228ENST00000471635 ALMS1Q8TCU4 4167 aa-0.63□□□□□ -2.51
RBM39-228ENST00000471635 WFDC2Q14508 124 aa-0.63□□□□□ -2.51
RBM39-228ENST00000471635 LINC01545Q5VT33 79 aa-0.63□□□□□ -2.51
RBM39-228ENST00000471635 SMIM15Q7Z3B0 74 aa-0.63□□□□□ -2.51
RBM39-228ENST00000471635 MAGOHBQ96A72 148 aaKnown RBP-0.63□□□□□ -2.51
RBM39-228ENST00000471635 CNFNQ9BYD5 112 aa-0.63□□□□□ -2.51
RBM39-228ENST00000471635 NDUFA12Q9UI09 145 aa-0.63□□□□□ -2.51
RBM39-228ENST00000471635 HSPB11Q9Y547 144 aa-0.63□□□□□ -2.51
RBM39-228ENST00000471635 PLCE1Q9P212 2302 aa-0.63□□□□□ -2.51
RBM39-228ENST00000471635 SYNJ1O43426 1573 aa-0.63□□□□□ -2.51
RBM39-228ENST00000471635 MUC22E2RYF6 1773 aaPredicted RBP-0.63□□□□□ -2.51
RBM39-228ENST00000471635 SRRM2Q9UQ35 2752 aaKnown RBP-0.63□□□□□ -2.51
RBM39-228ENST00000471635 VWFP04275 2813 aa-0.64□□□□□ -2.51
RBM39-228ENST00000471635 PRM1P04553 51 aa-0.64□□□□□ -2.51
RBM39-228ENST00000471635 EDDM3BP56851 147 aa-0.64□□□□□ -2.51
RBM39-228ENST00000471635 DEFB109BQ30KR1 87 aa-0.64□□□□□ -2.51
RBM39-228ENST00000471635 SCP2D1Q9UJQ7 156 aa-0.64□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms