RNA–Protein interactions for RNA: ENST00000441438.2

SYNE2-206, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,084 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-206ENST00000441438 SPTA1P02549 2419 aa7.74□□□□□ -1.17
SYNE2-206ENST00000441438 APCSP02743 223 aa7.74□□□□□ -1.17
SYNE2-206ENST00000441438 PCBD1P61457 104 aa7.74□□□□□ -1.17
SYNE2-206ENST00000441438 BBC3Q96PG8 261 aaPredicted RBP7.74□□□□□ -1.17
SYNE2-206ENST00000441438 USF3Q68DE3 2245 aa7.74□□□□□ -1.17
SYNE2-206ENST00000441438 ACACAQ13085 2346 aa7.73□□□□□ -1.17
SYNE2-206ENST00000441438 IGLV2-8P01709 118 aa7.73□□□□□ -1.17
SYNE2-206ENST00000441438 ZFP2Q6ZN57 461 aa7.73□□□□□ -1.17
SYNE2-206ENST00000441438 IGF2RP11717 2491 aa7.73□□□□□ -1.17
SYNE2-206ENST00000441438 AKAP13Q12802 2813 aa7.73□□□□□ -1.17
SYNE2-206ENST00000441438 SPINK14Q6IE38 97 aa7.73□□□□□ -1.17
SYNE2-206ENST00000441438 IL36BQ9NZH7 164 aa7.73□□□□□ -1.17
SYNE2-206ENST00000441438 PKDREJQ9NTG1 2253 aa7.73□□□□□ -1.17
SYNE2-206ENST00000441438 IGKV1-12A0A0C4DH73 117 aa7.72□□□□□ -1.17
SYNE2-206ENST00000441438 IGKV1D-12P01611 117 aa7.72□□□□□ -1.17
SYNE2-206ENST00000441438 ZNF32P17041 273 aa7.72□□□□□ -1.17
SYNE2-206ENST00000441438 FUSP35637 526 aaKnown RBP eCLIP7.72□□□□□ -1.17
SYNE2-206ENST00000441438 SPTSSAQ969W0 71 aa7.72□□□□□ -1.17
SYNE2-206ENST00000441438 HEATR1Q9H583 2144 aaKnown RBP7.72□□□□□ -1.17
SYNE2-206ENST00000441438 PROK2Q9HC23 129 aa7.72□□□□□ -1.17
SYNE2-206ENST00000441438 IGHV1-45A0A0A0MS14 117 aa7.72□□□□□ -1.17
SYNE2-206ENST00000441438 LTAP01374 205 aa7.72□□□□□ -1.17
SYNE2-206ENST00000441438 CIRBPQ14011 172 aaKnown RBP7.72□□□□□ -1.17
SYNE2-206ENST00000441438 DAZAP2Q15038 168 aaPredicted RBP7.72□□□□□ -1.17
SYNE2-206ENST00000441438 UBALD1Q8TB05 177 aa7.72□□□□□ -1.17
SYNE2-206ENST00000441438 LINC01600Q96MT4 127 aa7.72□□□□□ -1.17
SYNE2-206ENST00000441438 TXNDC17Q9BRA2 123 aa7.72□□□□□ -1.17
SYNE2-206ENST00000441438 KIAA1549Q9HCM3 1950 aa7.72□□□□□ -1.17
SYNE2-206ENST00000441438 RELNP78509 3460 aa7.72□□□□□ -1.17
SYNE2-206ENST00000441438 KRTAP27-1Q3LI81 207 aa7.72□□□□□ -1.17
SYNE2-206ENST00000441438 TACC2O95359 2948 aa7.71□□□□□ -1.17
SYNE2-206ENST00000441438 IGKV1D-33P01593 117 aa7.71□□□□□ -1.17
SYNE2-206ENST00000441438 IGKV1-33P01594 117 aa7.71□□□□□ -1.17
SYNE2-206ENST00000441438 PRM2P04554 102 aa7.71□□□□□ -1.17
SYNE2-206ENST00000441438 TWIST1Q15672 202 aa7.71□□□□□ -1.17
SYNE2-206ENST00000441438 PSENENQ9NZ42 101 aa7.71□□□□□ -1.17
SYNE2-206ENST00000441438 KALRNO60229 2985 aa7.71□□□□□ -1.18
SYNE2-206ENST00000441438 APC2O95996 2303 aa7.71□□□□□ -1.18
SYNE2-206ENST00000441438 PINLYPA6NC86 204 aa7.71□□□□□ -1.18
SYNE2-206ENST00000441438 RNASE2P10153 161 aaKnown RBP7.71□□□□□ -1.18
SYNE2-206ENST00000441438 S100A4P26447 101 aaKnown RBP7.71□□□□□ -1.18
SYNE2-206ENST00000441438 C18orf65Q6ZTR6 163 aa7.71□□□□□ -1.18
SYNE2-206ENST00000441438 SLC25A22Q9H936 323 aa7.71□□□□□ -1.18
SYNE2-206ENST00000441438 IL36RNQ9UBH0 155 aa7.71□□□□□ -1.18
SYNE2-206ENST00000441438 PLCE1Q9P212 2302 aa7.71□□□□□ -1.18
SYNE2-206ENST00000441438 TRBV6-6A0A0A6YYG2 114 aa7.7□□□□□ -1.18
SYNE2-206ENST00000441438 C2orf70A6NJV1 201 aa7.7□□□□□ -1.18
SYNE2-206ENST00000441438 S100A7L2Q5SY68 101 aa7.7□□□□□ -1.18
SYNE2-206ENST00000441438 HIST1H4GQ99525 98 aa7.7□□□□□ -1.18
SYNE2-206ENST00000441438 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.7□□□□□ -1.18
SYNE2-206ENST00000441438 CXCL6P80162 114 aa7.7□□□□□ -1.18
SYNE2-206ENST00000441438 Q0VFX4 171 aa7.7□□□□□ -1.18
SYNE2-206ENST00000441438 F2Z2F3 143 aa7.7□□□□□ -1.18
SYNE2-206ENST00000441438 PLA2G2AP14555 144 aa7.7□□□□□ -1.18
SYNE2-206ENST00000441438 NPPCP23582 126 aa7.7□□□□□ -1.18
SYNE2-206ENST00000441438 FHL2Q14192 279 aa7.7□□□□□ -1.18
SYNE2-206ENST00000441438 CCL28Q9NRJ3 127 aa7.7□□□□□ -1.18
SYNE2-206ENST00000441438 C9JCJ5 164 aa7.69□□□□□ -1.18
SYNE2-206ENST00000441438 ATP5EP56381 51 aaPredicted RBP7.69□□□□□ -1.18
SYNE2-206ENST00000441438 BLCAPP62952 87 aa7.69□□□□□ -1.18
SYNE2-206ENST00000441438 IMMP1LQ96LU5 166 aa7.69□□□□□ -1.18
SYNE2-206ENST00000441438 CHD6Q8TD26 2715 aa7.69□□□□□ -1.18
SYNE2-206ENST00000441438 ZNF56Q15929 161 aa7.69□□□□□ -1.18
SYNE2-206ENST00000441438 FAM27BQ5VT28 67 aa7.69□□□□□ -1.18
SYNE2-206ENST00000441438 Q6ZRM9 215 aa7.69□□□□□ -1.18
SYNE2-206ENST00000441438 ZNF714Q96N38 554 aa7.69□□□□□ -1.18
SYNE2-206ENST00000441438 TRGV9Q99603 122 aa7.69□□□□□ -1.18
SYNE2-206ENST00000441438 SOSTDC1Q6X4U4 206 aa7.68□□□□□ -1.18
SYNE2-206ENST00000441438 ANKRD11Q6UB99 2663 aaPredicted RBP7.68□□□□□ -1.18
SYNE2-206ENST00000441438 J3QKU1 62 aa7.68□□□□□ -1.18
SYNE2-206ENST00000441438 MSRB1Q9NZV6 116 aa7.68□□□□□ -1.18
SYNE2-206ENST00000441438 LY96Q9Y6Y9 160 aa7.68□□□□□ -1.18
SYNE2-206ENST00000441438 A6NN06 94 aa7.67□□□□□ -1.18
SYNE2-206ENST00000441438 C11orf94C9JXX5 98 aa7.67□□□□□ -1.18
SYNE2-206ENST00000441438 PLXNB1O43157 2135 aa7.67□□□□□ -1.18
SYNE2-206ENST00000441438 ARFGEF3Q5TH69 2177 aa7.67□□□□□ -1.18
SYNE2-206ENST00000441438 INTS1Q8N201 2190 aaKnown RBP7.67□□□□□ -1.18
SYNE2-206ENST00000441438 IGHV3OR16-12A0A075B7B8 117 aa7.67□□□□□ -1.18
SYNE2-206ENST00000441438 IGKV1-6A0A0C4DH72 117 aa7.67□□□□□ -1.18
SYNE2-206ENST00000441438 IGKV1-39P01597 117 aa7.67□□□□□ -1.18
SYNE2-206ENST00000441438 IGKV1D-39P04432 117 aa7.67□□□□□ -1.18
SYNE2-206ENST00000441438 GNB1P62873 340 aa7.67□□□□□ -1.18
SYNE2-206ENST00000441438 TMEM61Q8N0U2 210 aa7.67□□□□□ -1.18
SYNE2-206ENST00000441438 SND1-IT1Q9HBX3 110 aa7.67□□□□□ -1.18
SYNE2-206ENST00000441438 IGHV4-28A0A0C4DH34 117 aa7.67□□□□□ -1.18
SYNE2-206ENST00000441438 IBA57-AS1B1ANH7 110 aa7.67□□□□□ -1.18
SYNE2-206ENST00000441438 BSPH1Q075Z2 132 aa7.67□□□□□ -1.18
SYNE2-206ENST00000441438 PCSK5Q92824 1860 aa7.67□□□□□ -1.18
SYNE2-206ENST00000441438 PTPRQQ9UMZ3 2332 aa7.66□□□□□ -1.18
SYNE2-206ENST00000441438 UBE2AP49459 152 aa7.66□□□□□ -1.18
SYNE2-206ENST00000441438 RPL30P62888 115 aaKnown RBP7.66□□□□□ -1.18
SYNE2-206ENST00000441438 ZNF503-AS2A6NEH8 195 aa7.66□□□□□ -1.18
SYNE2-206ENST00000441438 PMS2P5A8MQ11 134 aa7.66□□□□□ -1.18
SYNE2-206ENST00000441438 FGF12P61328 243 aa7.66□□□□□ -1.18
SYNE2-206ENST00000441438 REG3GQ6UW15 175 aa7.66□□□□□ -1.18
SYNE2-206ENST00000441438 LYPD5Q6UWN5 251 aa7.66□□□□□ -1.18
SYNE2-206ENST00000441438 SCXQ7RTU7 201 aa7.66□□□□□ -1.18
SYNE2-206ENST00000441438 FAM104BQ5XKR9 115 aa7.65□□□□□ -1.18
SYNE2-206ENST00000441438 IAPPP10997 89 aa7.65□□□□□ -1.18
SYNE2-206ENST00000441438 C11orf52Q96A22 123 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms