RNA–Protein interactions for RNA: ENST00000003912.7

NIPAL3-201, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-201ENST00000003912 UTF1Q5T230 341 aa7.91□□□□□ -1.14
NIPAL3-201ENST00000003912 ZNF503Q96F45 646 aa7.91□□□□□ -1.14
NIPAL3-201ENST00000003912 KMT2EQ8IZD2 1858 aa7.91□□□□□ -1.14
NIPAL3-201ENST00000003912 DEFB4AO15263 64 aa7.9□□□□□ -1.14
NIPAL3-201ENST00000003912 DEFB114Q30KQ6 69 aa7.9□□□□□ -1.14
NIPAL3-201ENST00000003912 LGALS9BQ3B8N2 356 aa7.9□□□□□ -1.14
NIPAL3-201ENST00000003912 LGALS9CQ6DKI2 356 aa7.9□□□□□ -1.14
NIPAL3-201ENST00000003912 ESM1Q9NQ30 184 aa7.9□□□□□ -1.14
NIPAL3-201ENST00000003912 CRYGBP07316 175 aa7.9□□□□□ -1.14
NIPAL3-201ENST00000003912 C10orf91Q5T1B1 145 aa7.9□□□□□ -1.14
NIPAL3-201ENST00000003912 TM2D2Q9BX73 214 aa7.9□□□□□ -1.14
NIPAL3-201ENST00000003912 CRIP3Q6Q6R5 217 aa7.9□□□□□ -1.14
NIPAL3-201ENST00000003912 IGHV3-30P01768 117 aa7.9□□□□□ -1.15
NIPAL3-201ENST00000003912 IGHV3-33P01772 117 aa7.9□□□□□ -1.15
NIPAL3-201ENST00000003912 IGHV3-30-3P0DP02 117 aa7.9□□□□□ -1.15
NIPAL3-201ENST00000003912 IGHV3-30-5P0DP03 117 aa7.9□□□□□ -1.15
NIPAL3-201ENST00000003912 MAJINQ3KP22 176 aa7.9□□□□□ -1.15
NIPAL3-201ENST00000003912 RNASE13Q5GAN3 156 aaKnown RBP7.9□□□□□ -1.15
NIPAL3-201ENST00000003912 C11orf45Q8TAV5 145 aa7.89□□□□□ -1.15
NIPAL3-201ENST00000003912 SONP18583 2426 aaKnown RBP7.89□□□□□ -1.15
NIPAL3-201ENST00000003912 TRBV7-3A0A075B6L6 115 aa7.89□□□□□ -1.15
NIPAL3-201ENST00000003912 LINC01006Q8NI28 216 aa7.89□□□□□ -1.15
NIPAL3-201ENST00000003912 ZNF702PQ9H963 129 aa7.89□□□□□ -1.15
NIPAL3-201ENST00000003912 MRPL35Q9NZE8 188 aaKnown RBP7.89□□□□□ -1.15
NIPAL3-201ENST00000003912 TRBV6-1A0A0K0K1D8 114 aa7.89□□□□□ -1.15
NIPAL3-201ENST00000003912 IGLL1P15814 213 aa7.89□□□□□ -1.15
NIPAL3-201ENST00000003912 AMTNQ6UX39 209 aa7.89□□□□□ -1.15
NIPAL3-201ENST00000003912 Q6ZWC4 215 aa7.89□□□□□ -1.15
NIPAL3-201ENST00000003912 IGKV1D-37A0A075B6S9 117 aa7.89□□□□□ -1.15
NIPAL3-201ENST00000003912 SMIM9A6NGZ8 99 aa7.89□□□□□ -1.15
NIPAL3-201ENST00000003912 SPINK8P0C7L1 97 aa7.89□□□□□ -1.15
NIPAL3-201ENST00000003912 UBE2BP63146 152 aa7.89□□□□□ -1.15
NIPAL3-201ENST00000003912 SPATA25Q9BR10 227 aa7.89□□□□□ -1.15
NIPAL3-201ENST00000003912 CCDC168Q8NDH2 2452 aa7.88□□□□□ -1.15
NIPAL3-201ENST00000003912 IGLL5B9A064 214 aa7.88□□□□□ -1.15
NIPAL3-201ENST00000003912 PRO0255Q9UI72 69 aa7.88□□□□□ -1.15
NIPAL3-201ENST00000003912 BRWD1-AS2P59051 145 aa7.88□□□□□ -1.15
NIPAL3-201ENST00000003912 Q6ZPA2 131 aa7.88□□□□□ -1.15
NIPAL3-201ENST00000003912 C1orf229Q6ZS94 237 aaPredicted RBP7.88□□□□□ -1.15
NIPAL3-201ENST00000003912 ODF3Q96PU9 254 aa7.88□□□□□ -1.15
NIPAL3-201ENST00000003912 TMEM126AQ9H061 195 aa7.88□□□□□ -1.15
NIPAL3-201ENST00000003912 SNHG12Q9BXW3 62 aa7.88□□□□□ -1.15
NIPAL3-201ENST00000003912 DEFB1P60022 68 aa7.87□□□□□ -1.15
NIPAL3-201ENST00000003912 K7EQG2 157 aa7.87□□□□□ -1.15
NIPAL3-201ENST00000003912 SLC25A29Q8N8R3 303 aa7.87□□□□□ -1.15
NIPAL3-201ENST00000003912 RPL39LQ96EH5 51 aaKnown RBP7.87□□□□□ -1.15
NIPAL3-201ENST00000003912 KRTAP10-9P60411 292 aa7.87□□□□□ -1.15
NIPAL3-201ENST00000003912 J3QQQ9 107 aa7.87□□□□□ -1.15
NIPAL3-201ENST00000003912 EIF4EBP1Q13541 118 aaPredicted RBP7.87□□□□□ -1.15
NIPAL3-201ENST00000003912 TRAV4A0A0B4J268 109 aa7.86□□□□□ -1.15
NIPAL3-201ENST00000003912 COX7A2LO14548 114 aa7.86□□□□□ -1.15
NIPAL3-201ENST00000003912 CAMK2N2Q96S95 79 aa7.86□□□□□ -1.15
NIPAL3-201ENST00000003912 EDA2RQ9HAV5 297 aa7.86□□□□□ -1.15
NIPAL3-201ENST00000003912 PYY3Q5JQD4 70 aa7.86□□□□□ -1.15
NIPAL3-201ENST00000003912 TRAV8-4A0A0B4J246 113 aa7.86□□□□□ -1.15
NIPAL3-201ENST00000003912 GATA1P15976 413 aaPredicted RBP7.86□□□□□ -1.15
NIPAL3-201ENST00000003912 PSMB8P28062 276 aa7.86□□□□□ -1.15
NIPAL3-201ENST00000003912 MPV17L2Q567V2 206 aa7.86□□□□□ -1.15
NIPAL3-201ENST00000003912 PCNX3Q9H6A9 2034 aa7.86□□□□□ -1.15
NIPAL3-201ENST00000003912 NAV3Q8IVL0 2385 aa7.86□□□□□ -1.15
NIPAL3-201ENST00000003912 C2orf82Q6UX34 121 aa7.85□□□□□ -1.15
NIPAL3-201ENST00000003912 C5orf38Q86SI9 138 aa7.85□□□□□ -1.15
NIPAL3-201ENST00000003912 Q8N6K4 173 aa7.85□□□□□ -1.15
NIPAL3-201ENST00000003912 MSRB1Q9NZV6 116 aa7.85□□□□□ -1.15
NIPAL3-201ENST00000003912 POLR3KQ9Y2Y1 108 aaPredicted RBP7.85□□□□□ -1.15
NIPAL3-201ENST00000003912 TRAV8-3A0A0A6YYJ7 113 aa7.85□□□□□ -1.15
NIPAL3-201ENST00000003912 LYRM9A8MSI8 78 aa7.85□□□□□ -1.15
NIPAL3-201ENST00000003912 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.85□□□□□ -1.15
NIPAL3-201ENST00000003912 C11orf1Q9H5F2 150 aa7.85□□□□□ -1.15
NIPAL3-201ENST00000003912 IGLV10-54A0A075B6I4 117 aa7.85□□□□□ -1.15
NIPAL3-201ENST00000003912 ZFP2Q6ZN57 461 aa7.85□□□□□ -1.15
NIPAL3-201ENST00000003912 MRPL52Q86TS9 123 aaKnown RBP7.85□□□□□ -1.15
NIPAL3-201ENST00000003912 ARHGAP21Q5T5U3 1957 aa7.85□□□□□ -1.15
NIPAL3-201ENST00000003912 HIVEP3Q5T1R4 2406 aa7.85□□□□□ -1.15
NIPAL3-201ENST00000003912 TRAV13-2A0A0B4J235 113 aa7.85□□□□□ -1.15
NIPAL3-201ENST00000003912 HERV-K104P63124 156 aa7.85□□□□□ -1.15
NIPAL3-201ENST00000003912 TRBV10-1A0A0K0K1A3 114 aa7.84□□□□□ -1.15
NIPAL3-201ENST00000003912 KIR3DS1Q14943 382 aa7.84□□□□□ -1.15
NIPAL3-201ENST00000003912 RPL18AQ02543 176 aaKnown RBP7.84□□□□□ -1.15
NIPAL3-201ENST00000003912 SCRT2Q9NQ03 307 aa7.84□□□□□ -1.15
NIPAL3-201ENST00000003912 PIEZO2Q9H5I5 2752 aa7.84□□□□□ -1.15
NIPAL3-201ENST00000003912 MDFICQ9P1T7 246 aa7.84□□□□□ -1.15
NIPAL3-201ENST00000003912 NDUFA7O95182 113 aa7.84□□□□□ -1.15
NIPAL3-201ENST00000003912 CTRLP40313 264 aa7.84□□□□□ -1.15
NIPAL3-201ENST00000003912 C10orf99Q6UWK7 81 aa7.84□□□□□ -1.15
NIPAL3-201ENST00000003912 VSIG2Q96IQ7 327 aa7.83□□□□□ -1.16
NIPAL3-201ENST00000003912 SIGMAR1Q99720 223 aa7.83□□□□□ -1.16
NIPAL3-201ENST00000003912 FGF6P10767 208 aa7.83□□□□□ -1.16
NIPAL3-201ENST00000003912 PRR14LQ5THK1 2151 aa7.82□□□□□ -1.16
NIPAL3-201ENST00000003912 MIFP14174 115 aa7.82□□□□□ -1.16
NIPAL3-201ENST00000003912 Q9H8V8 135 aa7.82□□□□□ -1.16
NIPAL3-201ENST00000003912 NAA38Q9BRA0 125 aaKnown RBP7.82□□□□□ -1.16
NIPAL3-201ENST00000003912 ZFAND3Q9H8U3 227 aa7.82□□□□□ -1.16
NIPAL3-201ENST00000003912 TLN1Q9Y490 2541 aaKnown RBP7.82□□□□□ -1.16
NIPAL3-201ENST00000003912 TAL2Q16559 108 aa7.82□□□□□ -1.16
NIPAL3-201ENST00000003912 FAM222AQ5U5X8 452 aa7.82□□□□□ -1.16
NIPAL3-201ENST00000003912 ZNF747Q9BV97 191 aa7.82□□□□□ -1.16
NIPAL3-201ENST00000003912 TIRAPP58753 221 aa7.81□□□□□ -1.16
NIPAL3-201ENST00000003912 GTSF1Q8WW33 167 aa7.81□□□□□ -1.16
NIPAL3-201ENST00000003912 SMR3AQ99954 134 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 117.5 ms