RNA–Protein interactions for RNA: ENST00000529469.1

SOX6-212, Transcript of SRY-box 6, humanhuman

TSL 4

Gene SOX6, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-212ENST00000529469 KIDINS220Q9ULH0 1771 aa2.38□□□□□ -2.03
SOX6-212ENST00000529469 KDM6BO15054 1643 aa2.38□□□□□ -2.03
SOX6-212ENST00000529469 ATAD5Q96QE3 1844 aa2.38□□□□□ -2.03
SOX6-212ENST00000529469 SHPRHQ149N8 1683 aa2.37□□□□□ -2.03
SOX6-212ENST00000529469 WDR90Q96KV7 1748 aa2.37□□□□□ -2.03
SOX6-212ENST00000529469 PARP4Q9UKK3 1724 aaKnown RBP2.37□□□□□ -2.03
SOX6-212ENST00000529469 CEP170Q5SW79 1584 aa2.37□□□□□ -2.03
SOX6-212ENST00000529469 MIA3Q5JRA6 1907 aa2.37□□□□□ -2.03
SOX6-212ENST00000529469 TMSB15BA0A087X1C1 80 aa2.37□□□□□ -2.03
SOX6-212ENST00000529469 F2Z2F3 143 aa2.37□□□□□ -2.03
SOX6-212ENST00000529469 CCL16O15467 120 aa2.37□□□□□ -2.03
SOX6-212ENST00000529469 CPSF4O95639 269 aaKnown RBP2.37□□□□□ -2.03
SOX6-212ENST00000529469 TRBV12-3P01733 135 aa2.37□□□□□ -2.03
SOX6-212ENST00000529469 IL4P05112 153 aa2.37□□□□□ -2.03
SOX6-212ENST00000529469 DYNLT3P51808 116 aa2.37□□□□□ -2.03
SOX6-212ENST00000529469 ATP5EP56381 51 aaPredicted RBP2.37□□□□□ -2.03
SOX6-212ENST00000529469 SYCNQ0VAF6 134 aa2.37□□□□□ -2.03
SOX6-212ENST00000529469 CIRBPQ14011 172 aaKnown RBP2.37□□□□□ -2.03
SOX6-212ENST00000529469 S100A7L2Q5SY68 101 aa2.37□□□□□ -2.03
SOX6-212ENST00000529469 TMEM170BQ5T4T1 132 aa2.37□□□□□ -2.03
SOX6-212ENST00000529469 C5orf38Q86SI9 138 aa2.37□□□□□ -2.03
SOX6-212ENST00000529469 FAM19A2Q8N3H0 131 aa2.37□□□□□ -2.03
SOX6-212ENST00000529469 WFDC5Q8TCV5 224 aa2.37□□□□□ -2.03
SOX6-212ENST00000529469 ZNF714Q96N38 554 aa2.37□□□□□ -2.03
SOX6-212ENST00000529469 UPK3BQ9BT76 320 aa2.37□□□□□ -2.03
SOX6-212ENST00000529469 LINC00588Q9Y4M8 146 aa2.37□□□□□ -2.03
SOX6-212ENST00000529469 MCM3APO60318 1980 aa2.37□□□□□ -2.03
SOX6-212ENST00000529469 PXDNQ92626 1479 aa2.37□□□□□ -2.03
SOX6-212ENST00000529469 MYOM1P52179 1685 aa2.37□□□□□ -2.03
SOX6-212ENST00000529469 ALS2Q96Q42 1657 aa2.37□□□□□ -2.03
SOX6-212ENST00000529469 FAM208AQ9UK61 1670 aaKnown RBP2.37□□□□□ -2.03
SOX6-212ENST00000529469 ATG2BQ96BY7 2078 aa2.37□□□□□ -2.03
SOX6-212ENST00000529469 PKD1L3Q7Z443 1732 aa2.37□□□□□ -2.03
SOX6-212ENST00000529469 BTAF1O14981 1849 aa2.36□□□□□ -2.03
SOX6-212ENST00000529469 BRWD3Q6RI45 1802 aa2.36□□□□□ -2.03
SOX6-212ENST00000529469 ZNF236Q9UL36 1845 aa2.36□□□□□ -2.03
SOX6-212ENST00000529469 ARFGEF1Q9Y6D6 1849 aa2.36□□□□□ -2.03
SOX6-212ENST00000529469 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.36□□□□□ -2.03
SOX6-212ENST00000529469 CRYM-AS1A6NIL9 109 aa2.36□□□□□ -2.03
SOX6-212ENST00000529469 C2orf70A6NJV1 201 aa2.36□□□□□ -2.03
SOX6-212ENST00000529469 CEBPZOSA8MTT3 80 aa2.36□□□□□ -2.03
SOX6-212ENST00000529469 IGKV1-5P01602 117 aa2.36□□□□□ -2.03
SOX6-212ENST00000529469 ACYP1P07311 99 aa2.36□□□□□ -2.03
SOX6-212ENST00000529469 IGHV1-8P0DP01 117 aa2.36□□□□□ -2.03
SOX6-212ENST00000529469 SLC25A16P16260 332 aa2.36□□□□□ -2.03
SOX6-212ENST00000529469 S100A4P26447 101 aaKnown RBP2.36□□□□□ -2.03
SOX6-212ENST00000529469 GCHFRP30047 84 aa2.36□□□□□ -2.03
SOX6-212ENST00000529469 FUSP35637 526 aaKnown RBP eCLIP2.36□□□□□ -2.03
SOX6-212ENST00000529469 EFNA4P52798 201 aa2.36□□□□□ -2.03
SOX6-212ENST00000529469 SSBP1Q04837 148 aaKnown RBP2.36□□□□□ -2.03
SOX6-212ENST00000529469 PSMG4Q5JS54 123 aa2.36□□□□□ -2.03
SOX6-212ENST00000529469 GUSBP11Q6P575 273 aa2.36□□□□□ -2.03
SOX6-212ENST00000529469 IGFL1Q6UW32 110 aa2.36□□□□□ -2.03
SOX6-212ENST00000529469 MARCH3Q86UD3 253 aa2.36□□□□□ -2.03
SOX6-212ENST00000529469 ZNF645Q8N7E2 425 aa2.36□□□□□ -2.03
SOX6-212ENST00000529469 SPTSSAQ969W0 71 aa2.36□□□□□ -2.03
SOX6-212ENST00000529469 TRGV9Q99603 122 aa2.36□□□□□ -2.03
SOX6-212ENST00000529469 CYSTM1Q9H1C7 97 aa2.36□□□□□ -2.03
SOX6-212ENST00000529469 CXCL16Q9H2A7 254 aa2.36□□□□□ -2.03
SOX6-212ENST00000529469 PTPRMP28827 1452 aa2.36□□□□□ -2.03
SOX6-212ENST00000529469 ANAPC1Q9H1A4 1944 aa2.36□□□□□ -2.03
SOX6-212ENST00000529469 TJP1Q07157 1748 aa2.36□□□□□ -2.03
SOX6-212ENST00000529469 QSER1Q2KHR3 1735 aa2.36□□□□□ -2.03
SOX6-212ENST00000529469 ANKRD12Q6UB98 2062 aa2.35□□□□□ -2.03
SOX6-212ENST00000529469 RALGAPA2Q2PPJ7 1873 aa2.35□□□□□ -2.03
SOX6-212ENST00000529469 GBF1Q92538 1859 aa2.35□□□□□ -2.03
SOX6-212ENST00000529469 C3P01024 1663 aa2.35□□□□□ -2.03
SOX6-212ENST00000529469 TRAV1-2A0A0B4J238 106 aa2.35□□□□□ -2.03
SOX6-212ENST00000529469 IGHV1-24A0A0C4DH33 117 aa2.35□□□□□ -2.03
SOX6-212ENST00000529469 A0A1W2PQD3 144 aa2.35□□□□□ -2.03
SOX6-212ENST00000529469 BUB1B-PAK6H3BSN5 160 aa2.35□□□□□ -2.03
SOX6-212ENST00000529469 FSTL3O95633 263 aa2.35□□□□□ -2.03
SOX6-212ENST00000529469 CKS2P33552 79 aa2.35□□□□□ -2.03
SOX6-212ENST00000529469 FXYD2P54710 66 aa2.35□□□□□ -2.03
SOX6-212ENST00000529469 NTM-AS1Q6ZSK4 140 aa2.35□□□□□ -2.03
SOX6-212ENST00000529469 C7orf65Q6ZTY9 151 aa2.35□□□□□ -2.03
SOX6-212ENST00000529469 PHF5AQ7RTV0 110 aaKnown RBP2.35□□□□□ -2.03
SOX6-212ENST00000529469 GPHB5Q86YW7 130 aa2.35□□□□□ -2.03
SOX6-212ENST00000529469 Q8N8P6 123 aa2.35□□□□□ -2.03
SOX6-212ENST00000529469 ZNF563Q8TA94 476 aa2.35□□□□□ -2.03
SOX6-212ENST00000529469 CAMK2N2Q96S95 79 aa2.35□□□□□ -2.03
SOX6-212ENST00000529469 NPCDR1Q9BY65 106 aa2.35□□□□□ -2.03
SOX6-212ENST00000529469 FGF23Q9GZV9 251 aaPredicted RBP2.35□□□□□ -2.03
SOX6-212ENST00000529469 LINC00474Q9P2X8 69 aa2.35□□□□□ -2.03
SOX6-212ENST00000529469 LAMA4Q16363 1823 aa2.35□□□□□ -2.03
SOX6-212ENST00000529469 COL27A1Q8IZC6 1860 aaPredicted RBP2.35□□□□□ -2.03
SOX6-212ENST00000529469 KIAA1549Q9HCM3 1950 aa2.34□□□□□ -2.03
SOX6-212ENST00000529469 C4AP0C0L4 1744 aa2.34□□□□□ -2.03
SOX6-212ENST00000529469 C4BP0C0L5 1744 aa2.34□□□□□ -2.03
SOX6-212ENST00000529469 COL24A1Q17RW2 1714 aa2.34□□□□□ -2.03
SOX6-212ENST00000529469 COL1A1P02452 1464 aaPredicted RBP2.34□□□□□ -2.03
SOX6-212ENST00000529469 IGHV6-1A0A0B4J1U7 121 aa2.34□□□□□ -2.03
SOX6-212ENST00000529469 IGHV1OR15-9A0A0B4J2B8 117 aa2.34□□□□□ -2.03
SOX6-212ENST00000529469 IGKV1-9A0A0C4DH69 117 aa2.34□□□□□ -2.03
SOX6-212ENST00000529469 LOC107984156A0A0G2JMH3 177 aa2.34□□□□□ -2.03
SOX6-212ENST00000529469 H3BMM0 161 aa2.34□□□□□ -2.03
SOX6-212ENST00000529469 PSPHP1O15172 72 aa2.34□□□□□ -2.03
SOX6-212ENST00000529469 SLC25A20O43772 301 aa2.34□□□□□ -2.03
SOX6-212ENST00000529469 COX7A2P2O60397 106 aa2.34□□□□□ -2.03
SOX6-212ENST00000529469 LEPROTL1O95214 131 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms