RNA–Protein interactions for RNA: ENST00000529469.1

SOX6-212, Transcript of SRY-box 6, humanhuman

TSL 4

Gene SOX6, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-212ENST00000529469 AEBP2Q6ZN18 517 aaPredicted RBP23.11■■□□□ 1.29
SOX6-212ENST00000529469 CHIC1Q5VXU3 224 aa22.63■■□□□ 1.21
SOX6-212ENST00000529469 PHF23Q9BUL5 403 aaPredicted RBP19.95■□□□□ 0.78
SOX6-212ENST00000529469 SENP3Q9H4L4 574 aaPredicted RBP19.53■□□□□ 0.72
SOX6-212ENST00000529469 PLPPR3Q6T4P5 718 aa18.4■□□□□ 0.54
SOX6-212ENST00000529469 FOXD1Q16676 465 aa18.14■□□□□ 0.49
SOX6-212ENST00000529469 PPP6R1Q9UPN7 881 aa17.56■□□□□ 0.4
SOX6-212ENST00000529469 ADRA2BP18089 450 aa17.54■□□□□ 0.4
SOX6-212ENST00000529469 PIAS4Q8N2W9 510 aaPredicted RBP17.13■□□□□ 0.33
SOX6-212ENST00000529469 MSH5O43196 834 aa16.65■□□□□ 0.26
SOX6-212ENST00000529469 PPP4R3CPQ6ZMV5 832 aa16.24■□□□□ 0.19
SOX6-212ENST00000529469 KCNA4P22459 653 aa16.03■□□□□ 0.16
SOX6-212ENST00000529469 SCAF1Q9H7N4 1312 aaKnown RBP15.96■□□□□ 0.15
SOX6-212ENST00000529469 MAPK8IP2Q13387 824 aaPredicted RBP15.89■□□□□ 0.13
SOX6-212ENST00000529469 NCBP3Q53F19 620 aaKnown RBP15.8■□□□□ 0.12
SOX6-212ENST00000529469 CNKSR2Q8WXI2 1034 aa15.74■□□□□ 0.11
SOX6-212ENST00000529469 NPM3O75607 178 aaKnown RBP15.64■□□□□ 0.09
SOX6-212ENST00000529469 DMRT2Q9Y5R5 561 aa15.62■□□□□ 0.09
SOX6-212ENST00000529469 RNF216Q9NWF9 866 aaPredicted RBP15.41■□□□□ 0.06
SOX6-212ENST00000529469 HOXD11P31277 338 aaPredicted RBP15.34■□□□□ 0.05
SOX6-212ENST00000529469 SLC4A1APQ9BWU0 796 aaKnown RBP15.25■□□□□ 0.03
SOX6-212ENST00000529469 DNAJC5BQ9UF47 199 aa15.12■□□□□ 0.01
SOX6-212ENST00000529469 POTEDQ86YR6 584 aa15.01□□□□□ -0.01
SOX6-212ENST00000529469 EHMT2Q96KQ7 1210 aa14.98□□□□□ -0.01
SOX6-212ENST00000529469 DCAF8L1A6NGE4 600 aa14.94□□□□□ -0.02
SOX6-212ENST00000529469 ZBTB22O15209 634 aa14.79□□□□□ -0.04
SOX6-212ENST00000529469 SLC4A2P04920 1241 aa14.76□□□□□ -0.05
SOX6-212ENST00000529469 CSRNP3Q8WYN3 585 aa14.74□□□□□ -0.05
SOX6-212ENST00000529469 FOXD4L1Q9NU39 408 aa14.69□□□□□ -0.06
SOX6-212ENST00000529469 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.6□□□□□ -0.07
SOX6-212ENST00000529469 U3KPZ7 1027 aaPredicted RBP14.43□□□□□ -0.1
SOX6-212ENST00000529469 MYCNP04198 464 aaPredicted RBP14.42□□□□□ -0.1
SOX6-212ENST00000529469 RNF39Q9H2S5 420 aa14.31□□□□□ -0.12
SOX6-212ENST00000529469 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.19□□□□□ -0.14
SOX6-212ENST00000529469 HNRNPUL2Q1KMD3 747 aaKnown RBP14.19□□□□□ -0.14
SOX6-212ENST00000529469 SAMD1Q6SPF0 538 aaPredicted RBP14.17□□□□□ -0.14
SOX6-212ENST00000529469 ATXN8OSP0DMR3 200 aa14.13□□□□□ -0.15
SOX6-212ENST00000529469 C1QBPQ07021 282 aaKnown RBP14.1□□□□□ -0.15
SOX6-212ENST00000529469 ATF5Q9Y2D1 282 aaPredicted RBP14.08□□□□□ -0.16
SOX6-212ENST00000529469 APLP2Q06481 763 aa14.01□□□□□ -0.17
SOX6-212ENST00000529469 SPINK5Q9NQ38 1064 aaPredicted RBP13.99□□□□□ -0.17
SOX6-212ENST00000529469 CAPN15O75808 1086 aa13.9□□□□□ -0.18
SOX6-212ENST00000529469 TRHP20396 242 aaPredicted RBP13.86□□□□□ -0.19
SOX6-212ENST00000529469 ZNF219Q9P2Y4 722 aaPredicted RBP13.84□□□□□ -0.19
SOX6-212ENST00000529469 CACNB1Q02641 598 aaPredicted RBP13.83□□□□□ -0.2
SOX6-212ENST00000529469 ABCB7O75027 752 aa13.68□□□□□ -0.22
SOX6-212ENST00000529469 POLA2Q14181 598 aa13.66□□□□□ -0.22
SOX6-212ENST00000529469 DSG3P32926 999 aa13.65□□□□□ -0.22
SOX6-212ENST00000529469 MKRN4PQ13434 485 aaPredicted RBP13.47□□□□□ -0.25
SOX6-212ENST00000529469 FBLN2P98095 1184 aa13.41□□□□□ -0.26
SOX6-212ENST00000529469 ZBTB12Q9Y330 459 aaPredicted RBP13.4□□□□□ -0.26
SOX6-212ENST00000529469 FKBP8Q14318 412 aa13.32□□□□□ -0.28
SOX6-212ENST00000529469 OSCARQ8IYS5 282 aa13.23□□□□□ -0.29
SOX6-212ENST00000529469 SPDYE4A6NLX3 237 aa13.18□□□□□ -0.3
SOX6-212ENST00000529469 SPDYE2BA6NHP3 402 aa13.07□□□□□ -0.32
SOX6-212ENST00000529469 SPDYE6P0CI01 402 aa13.07□□□□□ -0.32
SOX6-212ENST00000529469 SPDYE2Q495Y8 402 aa13.07□□□□□ -0.32
SOX6-212ENST00000529469 ZNF692Q9BU19 519 aaPredicted RBP13.04□□□□□ -0.32
SOX6-212ENST00000529469 SSUH2Q9Y2M2 353 aa13.01□□□□□ -0.33
SOX6-212ENST00000529469 PROM2Q8N271 834 aa13□□□□□ -0.33
SOX6-212ENST00000529469 RBM42Q9BTD8 480 aaKnown RBP12.96□□□□□ -0.33
SOX6-212ENST00000529469 PABPN1Q86U42 306 aaKnown RBP eCLIP12.89□□□□□ -0.35
SOX6-212ENST00000529469 AKT1S1Q96B36 256 aa12.83□□□□□ -0.36
SOX6-212ENST00000529469 FBXO3Q9UK99 471 aa12.75□□□□□ -0.37
SOX6-212ENST00000529469 REM2Q8IYK8 340 aaPredicted RBP12.73□□□□□ -0.37
SOX6-212ENST00000529469 SPDYE1Q8NFV5 336 aaPredicted RBP12.65□□□□□ -0.38
SOX6-212ENST00000529469 STAG3Q9UJ98 1225 aa12.64□□□□□ -0.39
SOX6-212ENST00000529469 VASPP50552 380 aaPredicted RBP12.63□□□□□ -0.39
SOX6-212ENST00000529469 PITPNM1O00562 1244 aa12.62□□□□□ -0.39
SOX6-212ENST00000529469 CLEC11AQ9Y240 323 aa12.61□□□□□ -0.39
SOX6-212ENST00000529469 PRR29P0C7W0 189 aa12.49□□□□□ -0.41
SOX6-212ENST00000529469 IFNLR1Q8IU57 520 aaPredicted RBP12.48□□□□□ -0.41
SOX6-212ENST00000529469 MIER1Q8N108 512 aa12.46□□□□□ -0.41
SOX6-212ENST00000529469 PLCD3Q8N3E9 789 aa12.46□□□□□ -0.41
SOX6-212ENST00000529469 CHRDL2Q6WN34 429 aa12.42□□□□□ -0.42
SOX6-212ENST00000529469 CREBZFQ9NS37 354 aa12.4□□□□□ -0.42
SOX6-212ENST00000529469 KLHL34Q8N239 644 aa12.36□□□□□ -0.43
SOX6-212ENST00000529469 PLEKHG5O94827 1062 aa12.35□□□□□ -0.43
SOX6-212ENST00000529469 FXR2P51116 673 aaKnown RBP eCLIP12.33□□□□□ -0.44
SOX6-212ENST00000529469 CHADLQ6NUI6 762 aa12.33□□□□□ -0.44
SOX6-212ENST00000529469 RTN4Q9NQC3 1192 aaKnown RBP12.33□□□□□ -0.44
SOX6-212ENST00000529469 MNX1P50219 401 aaPredicted RBP12.3□□□□□ -0.44
SOX6-212ENST00000529469 AMER1Q5JTC6 1135 aaPredicted RBP12.29□□□□□ -0.44
SOX6-212ENST00000529469 PIP4P2Q8N4L2 257 aa12.29□□□□□ -0.44
SOX6-212ENST00000529469 ZBTB47Q9UFB7 747 aaPredicted RBP12.29□□□□□ -0.44
SOX6-212ENST00000529469 SPOCK2Q92563 424 aa12.28□□□□□ -0.44
SOX6-212ENST00000529469 PRKAR2AP13861 404 aaKnown RBP12.27□□□□□ -0.45
SOX6-212ENST00000529469 FARP1Q9Y4F1 1045 aaPredicted RBP12.19□□□□□ -0.46
SOX6-212ENST00000529469 NUBP1P53384 320 aa12.17□□□□□ -0.46
SOX6-212ENST00000529469 NPM1P06748 294 aaKnown RBP eCLIP12.14□□□□□ -0.47
SOX6-212ENST00000529469 RASEFQ8IZ41 740 aa12.12□□□□□ -0.47
SOX6-212ENST00000529469 PKD2Q13563 968 aa12.11□□□□□ -0.47
SOX6-212ENST00000529469 CIZ1Q9ULV3 898 aaPredicted RBP12.08□□□□□ -0.48
SOX6-212ENST00000529469 FAM212AQ96EL1 285 aa12.05□□□□□ -0.48
SOX6-212ENST00000529469 GSE1Q14687 1217 aa12.02□□□□□ -0.49
SOX6-212ENST00000529469 DCAF8Q5TAQ9 597 aa12.02□□□□□ -0.49
SOX6-212ENST00000529469 TSPYL2Q9H2G4 693 aaPredicted RBP11.99□□□□□ -0.49
SOX6-212ENST00000529469 ECM2O94769 699 aaPredicted RBP11.98□□□□□ -0.49
SOX6-212ENST00000529469 CD44P16070 742 aaKnown RBP11.94□□□□□ -0.5
SOX6-212ENST00000529469 C19orf67A6NJJ6 358 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms