RNA–Protein interactions for RNA: ENST00000360620.7

EPHB4-202, Transcript of EPH receptor B4, humanhuman

TSL 1 (best) BASIC

Gene EPHB4, Length 3,789 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-202ENST00000360620 BUB3O43684 328 aa9.29□□□□□ -0.92
EPHB4-202ENST00000360620 ZFAND6Q6FIF0 208 aa9.29□□□□□ -0.92
EPHB4-202ENST00000360620 SNRPD3P62318 126 aaKnown RBP9.29□□□□□ -0.92
EPHB4-202ENST00000360620 ANXA2RQ3ZCQ2 193 aa9.29□□□□□ -0.92
EPHB4-202ENST00000360620 OR11H6Q8NGC7 330 aa9.29□□□□□ -0.92
EPHB4-202ENST00000360620 GAGE2BQ13066 116 aa9.28□□□□□ -0.92
EPHB4-202ENST00000360620 LY6DQ14210 128 aa9.28□□□□□ -0.92
EPHB4-202ENST00000360620 GAGE2EQ4V326 116 aa9.28□□□□□ -0.92
EPHB4-202ENST00000360620 NPBQ8NG41 125 aa9.28□□□□□ -0.92
EPHB4-202ENST00000360620 PPDPFLQ8WWR9 84 aa9.28□□□□□ -0.92
EPHB4-202ENST00000360620 GAGE2DQ9UEU5 116 aa9.28□□□□□ -0.92
EPHB4-202ENST00000360620 UFSP1Q6NVU6 142 aa9.28□□□□□ -0.92
EPHB4-202ENST00000360620 LRRK2Q5S007 2527 aa9.28□□□□□ -0.92
EPHB4-202ENST00000360620 IGHV7-81A0A0B4J1V7 117 aa9.28□□□□□ -0.92
EPHB4-202ENST00000360620 TRAV12-3A0A0B4J271 114 aa9.28□□□□□ -0.92
EPHB4-202ENST00000360620 RPL39LQ96EH5 51 aaKnown RBP9.28□□□□□ -0.92
EPHB4-202ENST00000360620 U3KQK5 164 aa9.28□□□□□ -0.92
EPHB4-202ENST00000360620 SMG1Q96Q15 3661 aaKnown RBP9.27□□□□□ -0.92
EPHB4-202ENST00000360620 FCN3O75636 299 aa9.27□□□□□ -0.92
EPHB4-202ENST00000360620 C1orf122Q6ZSJ8 110 aa9.27□□□□□ -0.92
EPHB4-202ENST00000360620 HIVEP3Q5T1R4 2406 aa9.27□□□□□ -0.92
EPHB4-202ENST00000360620 TACC2O95359 2948 aa9.27□□□□□ -0.93
EPHB4-202ENST00000360620 SONP18583 2426 aaKnown RBP9.27□□□□□ -0.93
EPHB4-202ENST00000360620 ABCA2Q9BZC7 2435 aa9.27□□□□□ -0.93
EPHB4-202ENST00000360620 KLHL30-AS1Q8NEE0 82 aa9.27□□□□□ -0.93
EPHB4-202ENST00000360620 MOB4Q9Y3A3 225 aa9.27□□□□□ -0.93
EPHB4-202ENST00000360620 TRAV26-1A0A087WT03 109 aa9.27□□□□□ -0.93
EPHB4-202ENST00000360620 A0A096LNJ9 63 aa9.27□□□□□ -0.93
EPHB4-202ENST00000360620 RBAKDNA6NC62 111 aa9.27□□□□□ -0.93
EPHB4-202ENST00000360620 SCGB1A1P11684 91 aa9.27□□□□□ -0.93
EPHB4-202ENST00000360620 PMVKQ15126 192 aa9.27□□□□□ -0.93
EPHB4-202ENST00000360620 C20orf78Q9BR46 151 aa9.27□□□□□ -0.93
EPHB4-202ENST00000360620 PCSK5Q92824 1860 aa9.27□□□□□ -0.93
EPHB4-202ENST00000360620 WNK1Q9H4A3 2382 aa9.27□□□□□ -0.93
EPHB4-202ENST00000360620 TRBV20-1A0A075B6N2 111 aa9.26□□□□□ -0.93
EPHB4-202ENST00000360620 SPAG8Q99932 426 aaPredicted RBP9.26□□□□□ -0.93
EPHB4-202ENST00000360620 AGRNO00468 2067 aa9.26□□□□□ -0.93
EPHB4-202ENST00000360620 GAS8-AS1O95177 125 aa9.26□□□□□ -0.93
EPHB4-202ENST00000360620 BRD3OSQ6XYD6 125 aa9.26□□□□□ -0.93
EPHB4-202ENST00000360620 TM2D2Q9BX73 214 aa9.26□□□□□ -0.93
EPHB4-202ENST00000360620 IGKV3D-20A0A0C4DH25 116 aa9.26□□□□□ -0.93
EPHB4-202ENST00000360620 ZNF688P0C7X2 276 aa9.26□□□□□ -0.93
EPHB4-202ENST00000360620 GRNP28799 593 aaKnown RBP9.26□□□□□ -0.93
EPHB4-202ENST00000360620 CRYBA4P53673 196 aa9.26□□□□□ -0.93
EPHB4-202ENST00000360620 RHPN1-AS1Q9BWJ2 59 aa9.26□□□□□ -0.93
EPHB4-202ENST00000360620 TNFRSF18Q9Y5U5 241 aa9.26□□□□□ -0.93
EPHB4-202ENST00000360620 SDHAF1A6NFY7 115 aa9.25□□□□□ -0.93
EPHB4-202ENST00000360620 E9PLD3 99 aa9.25□□□□□ -0.93
EPHB4-202ENST00000360620 NPFFO15130 113 aa9.25□□□□□ -0.93
EPHB4-202ENST00000360620 CD28P10747 220 aa9.25□□□□□ -0.93
EPHB4-202ENST00000360620 MAPKAPK5-AS1Q8N8E1 139 aa9.25□□□□□ -0.93
EPHB4-202ENST00000360620 RNF185Q96GF1 192 aa9.25□□□□□ -0.93
EPHB4-202ENST00000360620 USP9XQ93008 2570 aaPredicted RBP9.25□□□□□ -0.93
EPHB4-202ENST00000360620 NACAE9PAV3 2078 aa9.25□□□□□ -0.93
EPHB4-202ENST00000360620 F6UB75 175 aa9.25□□□□□ -0.93
EPHB4-202ENST00000360620 CIRBPQ14011 172 aaKnown RBP9.25□□□□□ -0.93
EPHB4-202ENST00000360620 ZNF876PQ49A33 203 aa9.25□□□□□ -0.93
EPHB4-202ENST00000360620 PRO1854Q9UHT4 67 aa9.24□□□□□ -0.93
EPHB4-202ENST00000360620 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.24□□□□□ -0.93
EPHB4-202ENST00000360620 GNRH2O43555 120 aa9.24□□□□□ -0.93
EPHB4-202ENST00000360620 UBE2E1P51965 193 aa9.24□□□□□ -0.93
EPHB4-202ENST00000360620 NPC2P61916 151 aa9.24□□□□□ -0.93
EPHB4-202ENST00000360620 C1QTNF4Q9BXJ3 329 aa9.24□□□□□ -0.93
EPHB4-202ENST00000360620 OVOL3O00110 214 aa9.24□□□□□ -0.93
EPHB4-202ENST00000360620 SPANXB1Q9NS25 103 aaPredicted RBP9.24□□□□□ -0.93
EPHB4-202ENST00000360620 PTPRBP23467 1997 aa9.24□□□□□ -0.93
EPHB4-202ENST00000360620 TRAV8-4A0A0B4J246 113 aa9.23□□□□□ -0.93
EPHB4-202ENST00000360620 DUSP14O95147 198 aaKnown RBP9.23□□□□□ -0.93
EPHB4-202ENST00000360620 BPESC1Q9GZL8 116 aa9.23□□□□□ -0.93
EPHB4-202ENST00000360620 PKD1L2Q7Z442 2459 aa9.23□□□□□ -0.93
EPHB4-202ENST00000360620 J3QQQ9 107 aa9.23□□□□□ -0.93
EPHB4-202ENST00000360620 KLRB1Q12918 225 aa9.23□□□□□ -0.93
EPHB4-202ENST00000360620 Q8N9W7 124 aa9.23□□□□□ -0.93
EPHB4-202ENST00000360620 PLEKHB2Q96CS7 222 aa9.23□□□□□ -0.93
EPHB4-202ENST00000360620 MEIG1Q5JSS6 88 aa9.22□□□□□ -0.93
EPHB4-202ENST00000360620 GATD1Q8NB37 220 aa9.22□□□□□ -0.93
EPHB4-202ENST00000360620 PTH2Q96A98 100 aa9.22□□□□□ -0.93
EPHB4-202ENST00000360620 SPXQ9BT56 116 aa9.22□□□□□ -0.93
EPHB4-202ENST00000360620 TRAV12-1A0A0B4J245 112 aa9.22□□□□□ -0.93
EPHB4-202ENST00000360620 FAM223BA6NKX1 122 aa9.22□□□□□ -0.93
EPHB4-202ENST00000360620 LGALS1P09382 135 aaKnown RBP9.22□□□□□ -0.93
EPHB4-202ENST00000360620 HOXB4P17483 251 aaPredicted RBP9.22□□□□□ -0.93
EPHB4-202ENST00000360620 DEFB1P60022 68 aa9.22□□□□□ -0.93
EPHB4-202ENST00000360620 FOXI1Q12951 378 aa9.22□□□□□ -0.93
EPHB4-202ENST00000360620 FAM223AQ8IWN6 122 aa9.22□□□□□ -0.93
EPHB4-202ENST00000360620 MRPL53Q96EL3 112 aaKnown RBP9.22□□□□□ -0.93
EPHB4-202ENST00000360620 LRBAP50851 2863 aa9.22□□□□□ -0.93
EPHB4-202ENST00000360620 A0A0U1RRA0 63 aa9.22□□□□□ -0.93
EPHB4-202ENST00000360620 IGHV3-73A0A0B4J1V6 119 aa9.21□□□□□ -0.93
EPHB4-202ENST00000360620 SLC25A20O43772 301 aa9.21□□□□□ -0.93
EPHB4-202ENST00000360620 HERV-K104P63124 156 aa9.21□□□□□ -0.93
EPHB4-202ENST00000360620 LENEPQ9Y5L5 61 aa9.21□□□□□ -0.93
EPHB4-202ENST00000360620 ABCA12Q86UK0 2595 aa9.21□□□□□ -0.93
EPHB4-202ENST00000360620 H3BUX3 64 aa9.21□□□□□ -0.94
EPHB4-202ENST00000360620 SRSF2Q01130 221 aaKnown RBP9.21□□□□□ -0.94
EPHB4-202ENST00000360620 ATXN8Q156A1 80 aa9.21□□□□□ -0.94
EPHB4-202ENST00000360620 C2orf82Q6UX34 121 aa9.21□□□□□ -0.94
EPHB4-202ENST00000360620 BAALCQ8WXS3 180 aa9.21□□□□□ -0.94
EPHB4-202ENST00000360620 TMEM141Q96I45 108 aa9.21□□□□□ -0.94
EPHB4-202ENST00000360620 HHLA3Q9XRX5 114 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms