RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Ifna12Q80SS5 189 aa12.85□□□□□ -0.35
Trim39-203ENSMUST00000113706 EtdQ80SW5 59 aa12.85□□□□□ -0.35
Trim39-203ENSMUST00000113706 Slc35d1A2AKQ0 355 aa12.85□□□□□ -0.35
Trim39-203ENSMUST00000113706 Olfr177E9Q7W1 309 aa12.85□□□□□ -0.35
Trim39-203ENSMUST00000113706 Gm8653K9J7G2 307 aa12.85□□□□□ -0.35
Trim39-203ENSMUST00000113706 Vmn1r117L7N2C9 307 aa12.85□□□□□ -0.35
Trim39-203ENSMUST00000113706 CideaO70302 217 aa12.85□□□□□ -0.35
Trim39-203ENSMUST00000113706 Lrrc20Q8CI70 184 aa12.85□□□□□ -0.35
Trim39-203ENSMUST00000113706 OtosQ8R448 89 aa12.85□□□□□ -0.35
Trim39-203ENSMUST00000113706 Olfr786Q8VFH8 312 aa12.85□□□□□ -0.35
Trim39-203ENSMUST00000113706 Tmem170aQ9D342 144 aa12.85□□□□□ -0.35
Trim39-203ENSMUST00000113706 eef1akmt3D3YWP0 232 aa12.84□□□□□ -0.35
Trim39-203ENSMUST00000113706 Olfr513Q8VFZ3 309 aa12.84□□□□□ -0.35
Trim39-203ENSMUST00000113706 Olfr1294Q8VGE5 312 aa12.84□□□□□ -0.35
Trim39-203ENSMUST00000113706 Sfxn4Q925N1 313 aa12.84□□□□□ -0.35
Trim39-203ENSMUST00000113706 FibinQ9CQS3 217 aa12.84□□□□□ -0.35
Trim39-203ENSMUST00000113706 Pxmp4Q9JJW0 212 aa12.84□□□□□ -0.35
Trim39-203ENSMUST00000113706 Lsm4Q9QXA5 137 aaKnown RBP12.84□□□□□ -0.35
Trim39-203ENSMUST00000113706 Trbv19A0A0B4J1H4 117 aa12.84□□□□□ -0.35
Trim39-203ENSMUST00000113706 Olfr282A1L1B4 308 aa12.84□□□□□ -0.35
Trim39-203ENSMUST00000113706 Spint5J3KMK8 105 aa12.84□□□□□ -0.35
Trim39-203ENSMUST00000113706 P04212 136 aa12.84□□□□□ -0.35
Trim39-203ENSMUST00000113706 Olfr399Q7TRX3 311 aa12.84□□□□□ -0.35
Trim39-203ENSMUST00000113706 Zfp459Q8BZ17 267 aa12.84□□□□□ -0.35
Trim39-203ENSMUST00000113706 Tmprss11dQ8VHK8 417 aa12.84□□□□□ -0.35
Trim39-203ENSMUST00000113706 Fam241aQ9CZL2 131 aa12.84□□□□□ -0.35
Trim39-203ENSMUST00000113706 Cysrt1Q9D1E4 142 aa12.84□□□□□ -0.35
Trim39-203ENSMUST00000113706 Gm10665K7N6B7 321 aa12.84□□□□□ -0.35
Trim39-203ENSMUST00000113706 Adora3Q61618 319 aa12.84□□□□□ -0.35
Trim39-203ENSMUST00000113706 Tmem212Q8C6V3 187 aa12.84□□□□□ -0.35
Trim39-203ENSMUST00000113706 AmtQ8CFA2 403 aaKnown RBP12.84□□□□□ -0.35
Trim39-203ENSMUST00000113706 Ms4a4bQ9ES61 226 aa12.84□□□□□ -0.35
Trim39-203ENSMUST00000113706 Rnd2Q9QYM5 227 aa12.84□□□□□ -0.35
Trim39-203ENSMUST00000113706 Ighv1-81A0A075B5Y4 117 aa12.83□□□□□ -0.36
Trim39-203ENSMUST00000113706 YrdcQ3U5F4 280 aa12.83□□□□□ -0.36
Trim39-203ENSMUST00000113706 Exosc2Q8VBV3 293 aaKnown RBP12.83□□□□□ -0.36
Trim39-203ENSMUST00000113706 Mlst8Q9DCJ1 326 aa12.83□□□□□ -0.36
Trim39-203ENSMUST00000113706 Vsig2Q9Z109 328 aa12.83□□□□□ -0.36
Trim39-203ENSMUST00000113706 Itpr3P70227 2670 aa12.83□□□□□ -0.36
Trim39-203ENSMUST00000113706 Csmd2V9GX34 3611 aa12.83□□□□□ -0.36
Trim39-203ENSMUST00000113706 Ighv1-37A0A0A6YW32 117 aa12.83□□□□□ -0.36
Trim39-203ENSMUST00000113706 Olfr1248A0A1L1SSZ5 307 aa12.83□□□□□ -0.36
Trim39-203ENSMUST00000113706 Gm21974F6W3F3 119 aa12.83□□□□□ -0.36
Trim39-203ENSMUST00000113706 Gm20767O70517 169 aa12.83□□□□□ -0.36
Trim39-203ENSMUST00000113706 Olfr1272Q8VGN8 308 aa12.83□□□□□ -0.36
Trim39-203ENSMUST00000113706 Mpdu1Q9R0Q9 247 aa12.83□□□□□ -0.36
Trim39-203ENSMUST00000113706 Cited4Q9WUL8 182 aa12.83□□□□□ -0.36
Trim39-203ENSMUST00000113706 Ighv8-9A0A0G2JET1 119 aa12.83□□□□□ -0.36
Trim39-203ENSMUST00000113706 Fcrl6A1YIY0 268 aa12.83□□□□□ -0.36
Trim39-203ENSMUST00000113706 Gm9970F6ZED4 185 aa12.83□□□□□ -0.36
Trim39-203ENSMUST00000113706 Klrd1O54707 179 aa12.83□□□□□ -0.36
Trim39-203ENSMUST00000113706 Nkx2-8O70584 235 aa12.83□□□□□ -0.36
Trim39-203ENSMUST00000113706 Hoxa1P09022 331 aa12.83□□□□□ -0.36
Trim39-203ENSMUST00000113706 Csn2P10598 231 aa12.83□□□□□ -0.36
Trim39-203ENSMUST00000113706 Olfr132Q7TRI8 313 aa12.83□□□□□ -0.36
Trim39-203ENSMUST00000113706 BC049730Q810N3 246 aa12.83□□□□□ -0.36
Trim39-203ENSMUST00000113706 Gm4894Q8CA09 118 aa12.83□□□□□ -0.36
Trim39-203ENSMUST00000113706 Q9DAZ5 108 aa12.83□□□□□ -0.36
Trim39-203ENSMUST00000113706 Eny2Q9JIX0 101 aaKnown RBP12.83□□□□□ -0.36
Trim39-203ENSMUST00000113706 Try5Q9QUK9 246 aa12.83□□□□□ -0.36
Trim39-203ENSMUST00000113706 Try4Q9R0T7 246 aa12.83□□□□□ -0.36
Trim39-203ENSMUST00000113706 Ttc28Q80XJ3 2450 aa12.82□□□□□ -0.36
Trim39-203ENSMUST00000113706 4930444P10RikD3YUR1 185 aa12.82□□□□□ -0.36
Trim39-203ENSMUST00000113706 F2rl2O08675 369 aa12.82□□□□□ -0.36
Trim39-203ENSMUST00000113706 Casp6O08738 276 aa12.82□□□□□ -0.36
Trim39-203ENSMUST00000113706 Mef2bO55087 349 aa12.82□□□□□ -0.36
Trim39-203ENSMUST00000113706 ApcsP12246 224 aa12.82□□□□□ -0.36
Trim39-203ENSMUST00000113706 Meox2P32443 303 aa12.82□□□□□ -0.36
Trim39-203ENSMUST00000113706 Tppp2Q0P5Y3 170 aa12.82□□□□□ -0.36
Trim39-203ENSMUST00000113706 Gm10447Q3UQ92 135 aa12.82□□□□□ -0.36
Trim39-203ENSMUST00000113706 Tmub1Q9JMG3 245 aa12.82□□□□□ -0.36
Trim39-203ENSMUST00000113706 Gm21244J3QK38 227 aa12.82□□□□□ -0.36
Trim39-203ENSMUST00000113706 Hmx3P42581 356 aa12.82□□□□□ -0.36
Trim39-203ENSMUST00000113706 Rpl23P62830 140 aaKnown RBP12.82□□□□□ -0.36
Trim39-203ENSMUST00000113706 Mex3bQ69Z36 601 aaKnown RBP12.82□□□□□ -0.36
Trim39-203ENSMUST00000113706 Fam174bQ8K064 153 aa12.82□□□□□ -0.36
Trim39-203ENSMUST00000113706 Ptrh2Q8R2Y8 181 aaKnown RBP12.82□□□□□ -0.36
Trim39-203ENSMUST00000113706 Ubtd1Q91WB7 227 aa12.82□□□□□ -0.36
Trim39-203ENSMUST00000113706 Scp2d1Q9DAH1 156 aa12.82□□□□□ -0.36
Trim39-203ENSMUST00000113706 A630076J17RikJ3QQ32 107 aa12.81□□□□□ -0.36
Trim39-203ENSMUST00000113706 Rab19P35294 217 aa12.81□□□□□ -0.36
Trim39-203ENSMUST00000113706 Arg1Q61176 323 aa12.81□□□□□ -0.36
Trim39-203ENSMUST00000113706 Olfr1382Q7TQT3 311 aa12.81□□□□□ -0.36
Trim39-203ENSMUST00000113706 Sh3bgrl3Q91VW3 93 aa12.81□□□□□ -0.36
Trim39-203ENSMUST00000113706 ChodlQ9CXM0 273 aa12.81□□□□□ -0.36
Trim39-203ENSMUST00000113706 Onecut1O08755 465 aa12.81□□□□□ -0.36
Trim39-203ENSMUST00000113706 Pla2g2aP31482 146 aa12.81□□□□□ -0.36
Trim39-203ENSMUST00000113706 Pef1Q8BFY6 275 aa12.81□□□□□ -0.36
Trim39-203ENSMUST00000113706 Olfr877Q8VF62 311 aa12.81□□□□□ -0.36
Trim39-203ENSMUST00000113706 Ppp1r14aQ91VC7 147 aa12.81□□□□□ -0.36
Trim39-203ENSMUST00000113706 D930048N14RikA2AA67 225 aa12.81□□□□□ -0.36
Trim39-203ENSMUST00000113706 BokO35425 213 aa12.81□□□□□ -0.36
Trim39-203ENSMUST00000113706 P01788 123 aa12.81□□□□□ -0.36
Trim39-203ENSMUST00000113706 Sesn1P58006 492 aa12.81□□□□□ -0.36
Trim39-203ENSMUST00000113706 Bpifb3Q80ZU7 473 aa12.81□□□□□ -0.36
Trim39-203ENSMUST00000113706 NanpQ9CPT3 248 aa12.81□□□□□ -0.36
Trim39-203ENSMUST00000113706 Tmem219Q9D123 240 aa12.81□□□□□ -0.36
Trim39-203ENSMUST00000113706 Mad2l1bpQ9DCX1 276 aa12.81□□□□□ -0.36
Trim39-203ENSMUST00000113706 Gm12728V9GX31 77 aa12.81□□□□□ -0.36
Trim39-203ENSMUST00000113706 Ncoa6Q9JL19 2067 aa12.8□□□□□ -0.36
Retrieved 100 of 22,080 RNA–protein pairs in 160 ms