Protein–RNA interactions for Protein: V9GX31

Gm12728, Peptidyl-prolyl cis-trans isomerase, mousemouse

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12728V9GX31 Gm25239-201ENSMUST00000174915 86 ntBASIC27,73■■■□□ 2,03
Gm12728V9GX31 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC27,44■■□□□ 1,98
Gm12728V9GX31 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC26,49■■□□□ 1,83
Gm12728V9GX31 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC26,44■■□□□ 1,82
Gm12728V9GX31 Psd-208ENSMUST00000224556 2034 ntBASIC25,63■■□□□ 1,69
Gm12728V9GX31 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC25,35■■□□□ 1,65
Gm12728V9GX31 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC25,26■■□□□ 1,63
Gm12728V9GX31 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC25,19■■□□□ 1,62
Gm12728V9GX31 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC25,05■■□□□ 1,6
Gm12728V9GX31 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC24,96■■□□□ 1,59
Gm12728V9GX31 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC24,91■■□□□ 1,58
Gm12728V9GX31 Gm15042-201ENSMUST00000120212 883 ntBASIC24,85■■□□□ 1,57
Gm12728V9GX31 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC24,64■■□□□ 1,53
Gm12728V9GX31 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC24,53■■□□□ 1,52
Gm12728V9GX31 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC24,53■■□□□ 1,52
Gm12728V9GX31 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC24,52■■□□□ 1,52
Gm12728V9GX31 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC24,49■■□□□ 1,51
Gm12728V9GX31 Gm15045-201ENSMUST00000117359 883 ntBASIC24,41■■□□□ 1,5
Gm12728V9GX31 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC24,18■■□□□ 1,46
Gm12728V9GX31 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC24,09■■□□□ 1,45
Gm12728V9GX31 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC24,03■■□□□ 1,44
Gm12728V9GX31 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC23,91■■□□□ 1,42
Gm12728V9GX31 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC23,9■■□□□ 1,42
Gm12728V9GX31 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC23,88■■□□□ 1,41
Gm12728V9GX31 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC23,86■■□□□ 1,41
Gm12728V9GX31 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC23,86■■□□□ 1,41
Gm12728V9GX31 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC23,83■■□□□ 1,41
Gm12728V9GX31 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC23,81■■□□□ 1,4
Gm12728V9GX31 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC23,75■■□□□ 1,39
Gm12728V9GX31 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC23,73■■□□□ 1,39
Gm12728V9GX31 Gm24109-201ENSMUST00000175489 103 ntBASIC23,72■■□□□ 1,39
Gm12728V9GX31 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC23,67■■□□□ 1,38
Gm12728V9GX31 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC23,66■■□□□ 1,38
Gm12728V9GX31 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC23,61■■□□□ 1,37
Gm12728V9GX31 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC23,51■■□□□ 1,35
Gm12728V9GX31 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC23,5■■□□□ 1,35
Gm12728V9GX31 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC23,49■■□□□ 1,35
Gm12728V9GX31 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC23,43■■□□□ 1,34
Gm12728V9GX31 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC23,33■■□□□ 1,33
Gm12728V9GX31 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC23,26■■□□□ 1,31
Gm12728V9GX31 Gm10524-201ENSMUST00000181931 1893 ntBASIC23,25■■□□□ 1,31
Gm12728V9GX31 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC23,23■■□□□ 1,31
Gm12728V9GX31 Gm23366-201ENSMUST00000175022 89 ntBASIC23,23■■□□□ 1,31
Gm12728V9GX31 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC23,19■■□□□ 1,3
Gm12728V9GX31 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC23,17■■□□□ 1,3
Gm12728V9GX31 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC23,11■■□□□ 1,29
Gm12728V9GX31 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC23,1■■□□□ 1,29
Gm12728V9GX31 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC23,08■■□□□ 1,29
Gm12728V9GX31 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC23,07■■□□□ 1,28
Gm12728V9GX31 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC23,02■■□□□ 1,28
Gm12728V9GX31 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC22,92■■□□□ 1,26
Gm12728V9GX31 AC153911.1-202ENSMUST00000218534 1034 ntBASIC22,88■■□□□ 1,25
Gm12728V9GX31 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC22,87■■□□□ 1,25
Gm12728V9GX31 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC22,82■■□□□ 1,24
Gm12728V9GX31 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC22,79■■□□□ 1,24
Gm12728V9GX31 Gm42596-201ENSMUST00000196305 1958 ntBASIC22,75■■□□□ 1,23
Gm12728V9GX31 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC22,72■■□□□ 1,23
Gm12728V9GX31 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC22,72■■□□□ 1,23
Gm12728V9GX31 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC22,7■■□□□ 1,23
Gm12728V9GX31 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC22,68■■□□□ 1,22
Gm12728V9GX31 CT025624.2-201ENSMUST00000223609 1909 ntBASIC22,65■■□□□ 1,22
Gm12728V9GX31 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC22,65■■□□□ 1,22
Gm12728V9GX31 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC22,62■■□□□ 1,21
Gm12728V9GX31 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC22,61■■□□□ 1,21
Gm12728V9GX31 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC22,61■■□□□ 1,21
Gm12728V9GX31 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC22,55■■□□□ 1,2
Gm12728V9GX31 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC22,49■■□□□ 1,19
Gm12728V9GX31 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC22,47■■□□□ 1,19
Gm12728V9GX31 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC22,41■■□□□ 1,18
Gm12728V9GX31 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC22,38■■□□□ 1,17
Gm12728V9GX31 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC22,35■■□□□ 1,17
Gm12728V9GX31 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC22,35■■□□□ 1,17
Gm12728V9GX31 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC22,33■■□□□ 1,17
Gm12728V9GX31 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC22,32■■□□□ 1,16
Gm12728V9GX31 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC22,28■■□□□ 1,16
Gm12728V9GX31 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC22,27■■□□□ 1,16
Gm12728V9GX31 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC22,26■■□□□ 1,15
Gm12728V9GX31 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC22,24■■□□□ 1,15
Gm12728V9GX31 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC22,19■■□□□ 1,14
Gm12728V9GX31 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC22,15■■□□□ 1,14
Gm12728V9GX31 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC22,11■■□□□ 1,13
Gm12728V9GX31 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC22,1■■□□□ 1,13
Gm12728V9GX31 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC22,07■■□□□ 1,12
Gm12728V9GX31 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC22,07■■□□□ 1,12
Gm12728V9GX31 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC22,01■■□□□ 1,11
Gm12728V9GX31 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1,11
Gm12728V9GX31 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1,11
Gm12728V9GX31 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC21,98■■□□□ 1,11
Gm12728V9GX31 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC21,96■■□□□ 1,11
Gm12728V9GX31 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC21,94■■□□□ 1,1
Gm12728V9GX31 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC21,93■■□□□ 1,1
Gm12728V9GX31 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC21,93■■□□□ 1,1
Gm12728V9GX31 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC21,92■■□□□ 1,1
Gm12728V9GX31 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC21,91■■□□□ 1,1
Gm12728V9GX31 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC21,9■■□□□ 1,1
Gm12728V9GX31 Gm27325-201ENSMUST00000175467 74 ntBASIC21,88■■□□□ 1,09
Gm12728V9GX31 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC21,87■■□□□ 1,09
Gm12728V9GX31 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC21,84■■□□□ 1,09
Gm12728V9GX31 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC21,83■■□□□ 1,09
Gm12728V9GX31 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC21,81■■□□□ 1,08
Retrieved 100 of 76,532 protein–RNA pairs in 11 ms