Protein–RNA interactions for Protein: Q810N3

BC049730, cDNA sequence BC049730, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BC049730Q810N3 Gm25239-201ENSMUST00000174915 86 ntBASIC33.06■■■□□ 2.88
BC049730Q810N3 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
BC049730Q810N3 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
BC049730Q810N3 Gm24109-201ENSMUST00000175489 103 ntBASIC28.9■■■□□ 2.22
BC049730Q810N3 Gm15042-201ENSMUST00000120212 883 ntBASIC28.5■■■□□ 2.15
BC049730Q810N3 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
BC049730Q810N3 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC27.93■■■□□ 2.06
BC049730Q810N3 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
BC049730Q810N3 Gm15045-201ENSMUST00000117359 883 ntBASIC27.71■■■□□ 2.03
BC049730Q810N3 Gm23366-201ENSMUST00000175022 89 ntBASIC27.6■■■□□ 2.01
BC049730Q810N3 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
BC049730Q810N3 AC153911.1-202ENSMUST00000218534 1034 ntBASIC27.08■■□□□ 1.93
BC049730Q810N3 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC26.89■■□□□ 1.9
BC049730Q810N3 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
BC049730Q810N3 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
BC049730Q810N3 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC26.76■■□□□ 1.87
BC049730Q810N3 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
BC049730Q810N3 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
BC049730Q810N3 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC26.39■■□□□ 1.82
BC049730Q810N3 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
BC049730Q810N3 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC26.33■■□□□ 1.81
BC049730Q810N3 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
BC049730Q810N3 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
BC049730Q810N3 Gm25238-201ENSMUST00000174914 89 ntBASIC26.19■■□□□ 1.78
BC049730Q810N3 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
BC049730Q810N3 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC25.77■■□□□ 1.72
BC049730Q810N3 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
BC049730Q810N3 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC25.71■■□□□ 1.71
BC049730Q810N3 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC25.7■■□□□ 1.7
BC049730Q810N3 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
BC049730Q810N3 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC25.49■■□□□ 1.67
BC049730Q810N3 Psd-208ENSMUST00000224556 2034 ntBASIC25.46■■□□□ 1.67
BC049730Q810N3 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
BC049730Q810N3 Gm25262-201ENSMUST00000174934 133 ntBASIC25.4■■□□□ 1.66
BC049730Q810N3 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
BC049730Q810N3 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC25.34■■□□□ 1.65
BC049730Q810N3 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC25.31■■□□□ 1.64
BC049730Q810N3 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC25.26■■□□□ 1.63
BC049730Q810N3 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC25.18■■□□□ 1.62
BC049730Q810N3 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
BC049730Q810N3 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC25.09■■□□□ 1.61
BC049730Q810N3 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
BC049730Q810N3 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
BC049730Q810N3 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC25.01■■□□□ 1.59
BC049730Q810N3 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC25.01■■□□□ 1.59
BC049730Q810N3 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC25■■□□□ 1.59
BC049730Q810N3 Gm26115-201ENSMUST00000175605 87 ntBASIC24.95■■□□□ 1.58
BC049730Q810N3 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC24.85■■□□□ 1.57
BC049730Q810N3 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
BC049730Q810N3 Gm27325-201ENSMUST00000175467 74 ntBASIC24.84■■□□□ 1.57
BC049730Q810N3 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC24.8■■□□□ 1.56
BC049730Q810N3 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
BC049730Q810N3 Gm8109-201ENSMUST00000194076 746 ntBASIC24.73■■□□□ 1.55
BC049730Q810N3 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC24.73■■□□□ 1.55
BC049730Q810N3 Rab21-202ENSMUST00000218831 843 ntBASIC24.72■■□□□ 1.55
BC049730Q810N3 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
BC049730Q810N3 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
BC049730Q810N3 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
BC049730Q810N3 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
BC049730Q810N3 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
BC049730Q810N3 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
BC049730Q810N3 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
BC049730Q810N3 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC24.31■■□□□ 1.48
BC049730Q810N3 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC24.29■■□□□ 1.48
BC049730Q810N3 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
BC049730Q810N3 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC24.28■■□□□ 1.48
BC049730Q810N3 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC24.24■■□□□ 1.47
BC049730Q810N3 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
BC049730Q810N3 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC24.23■■□□□ 1.47
BC049730Q810N3 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
BC049730Q810N3 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
BC049730Q810N3 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
BC049730Q810N3 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC24.12■■□□□ 1.45
BC049730Q810N3 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
BC049730Q810N3 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC24.1■■□□□ 1.45
BC049730Q810N3 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
BC049730Q810N3 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
BC049730Q810N3 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
BC049730Q810N3 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
BC049730Q810N3 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC23.96■■□□□ 1.43
BC049730Q810N3 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.43
BC049730Q810N3 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC23.94■■□□□ 1.42
BC049730Q810N3 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
BC049730Q810N3 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
BC049730Q810N3 Gm17082-201ENSMUST00000166043 1091 ntBASIC23.91■■□□□ 1.42
BC049730Q810N3 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
BC049730Q810N3 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
BC049730Q810N3 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
BC049730Q810N3 Gm24804-201ENSMUST00000174982 85 ntBASIC23.84■■□□□ 1.41
BC049730Q810N3 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
BC049730Q810N3 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC23.82■■□□□ 1.4
BC049730Q810N3 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
BC049730Q810N3 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
BC049730Q810N3 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC23.73■■□□□ 1.39
BC049730Q810N3 Gm27322-201ENSMUST00000184007 104 ntBASIC23.73■■□□□ 1.39
BC049730Q810N3 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
BC049730Q810N3 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC23.66■■□□□ 1.38
BC049730Q810N3 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC23.64■■□□□ 1.38
BC049730Q810N3 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
BC049730Q810N3 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms