RNA–Protein interactions for RNA: ENSMUST00000111816.2

Trim71-201, Transcript of E3 ubiquitin-protein ligase TRIM71, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim71, Length 9,332 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim71-201ENSMUST00000111816 Gm10277Q6R5C6 214 aa15.88■□□□□ 0.13
Trim71-201ENSMUST00000111816 Lamtor3O88653 124 aa15.88■□□□□ 0.13
Trim71-201ENSMUST00000111816 Tmem40Q4FJU9 225 aa15.88■□□□□ 0.13
Trim71-201ENSMUST00000111816 Shisa4Q8CA71 197 aa15.87■□□□□ 0.13
Trim71-201ENSMUST00000111816 Wfdc1Q9ESH5 211 aa15.87■□□□□ 0.13
Trim71-201ENSMUST00000111816 Foxq1O70220 400 aa15.87■□□□□ 0.13
Trim71-201ENSMUST00000111816 MdfiP70331 251 aa15.87■□□□□ 0.13
Trim71-201ENSMUST00000111816 Plch1Q4KWH5 1682 aa15.87■□□□□ 0.13
Trim71-201ENSMUST00000111816 Wfdc16A2A5H4 111 aa15.87■□□□□ 0.13
Trim71-201ENSMUST00000111816 Sft2d3Q9CSV6 209 aa15.87■□□□□ 0.13
Trim71-201ENSMUST00000111816 B430218F22RikQ8BQR5 223 aa15.87■□□□□ 0.13
Trim71-201ENSMUST00000111816 SlaQ60898 281 aa15.86■□□□□ 0.13
Trim71-201ENSMUST00000111816 Ighv5-12A0A075B5Q4 117 aa15.86■□□□□ 0.13
Trim71-201ENSMUST00000111816 Ighv14-3A0A075B5R9 117 aa15.86■□□□□ 0.13
Trim71-201ENSMUST00000111816 Sap25Q1EHW4 186 aa15.86■□□□□ 0.13
Trim71-201ENSMUST00000111816 Hoxb3P09026 433 aa15.86■□□□□ 0.13
Trim71-201ENSMUST00000111816 BadQ61337 204 aa15.86■□□□□ 0.13
Trim71-201ENSMUST00000111816 Lrrc25Q8K1T1 297 aa15.86■□□□□ 0.13
Trim71-201ENSMUST00000111816 Srd5a2Q99N99 254 aa15.86■□□□□ 0.13
Trim71-201ENSMUST00000111816 Masp2Q91WP0 685 aa15.86■□□□□ 0.13
Trim71-201ENSMUST00000111816 Upk3aQ9JKX8 287 aa15.86■□□□□ 0.13
Trim71-201ENSMUST00000111816 GzmbP04187 247 aa15.86■□□□□ 0.13
Trim71-201ENSMUST00000111816 Lax1Q8BHB3 407 aa15.86■□□□□ 0.13
Trim71-201ENSMUST00000111816 Zdbf2Q5SS00 2493 aaKnown RBP15.86■□□□□ 0.13
Trim71-201ENSMUST00000111816 Gm21370Q3T9V6 190 aa15.86■□□□□ 0.13
Trim71-201ENSMUST00000111816 Ss18Q62280 418 aa15.86■□□□□ 0.13
Trim71-201ENSMUST00000111816 TskuQ8CBR6 354 aa15.86■□□□□ 0.13
Trim71-201ENSMUST00000111816 Dkk2Q9QYZ8 259 aa15.86■□□□□ 0.13
Trim71-201ENSMUST00000111816 Gm6970F7DCP6 221 aa15.86■□□□□ 0.13
Trim71-201ENSMUST00000111816 Ucp3P56501 308 aa15.86■□□□□ 0.13
Trim71-201ENSMUST00000111816 Trav12n-2A0A075B626 113 aa15.86■□□□□ 0.13
Trim71-201ENSMUST00000111816 Zfp764E9QAP1 431 aa15.86■□□□□ 0.13
Trim71-201ENSMUST00000111816 Spink2Q8BMY7 86 aa15.86■□□□□ 0.13
Trim71-201ENSMUST00000111816 Ighv6-4A0A0A6YX19 119 aa15.85■□□□□ 0.13
Trim71-201ENSMUST00000111816 Ighv1-43A0A0A6YXN5 117 aa15.85■□□□□ 0.13
Trim71-201ENSMUST00000111816 Gm14409A2ARR8 349 aa15.85■□□□□ 0.13
Trim71-201ENSMUST00000111816 Vmn1r177E9PXM3 309 aa15.85■□□□□ 0.13
Trim71-201ENSMUST00000111816 Gm4791J3QQ14 102 aa15.85■□□□□ 0.13
Trim71-201ENSMUST00000111816 Hoxd3P09027 433 aa15.85■□□□□ 0.13
Trim71-201ENSMUST00000111816 Il1f10Q8R459 152 aa15.85■□□□□ 0.13
Trim71-201ENSMUST00000111816 Plxnb3Q9QY40 1902 aa15.85■□□□□ 0.13
Trim71-201ENSMUST00000111816 Gm20532G3UXR8 106 aa15.85■□□□□ 0.13
Trim71-201ENSMUST00000111816 Dmrt3Q80WT2 476 aa15.85■□□□□ 0.13
Trim71-201ENSMUST00000111816 Nkg7Q99PA5 165 aa15.85■□□□□ 0.13
Trim71-201ENSMUST00000111816 Trav3-4A0A075B654 114 aa15.85■□□□□ 0.13
Trim71-201ENSMUST00000111816 Klf16P58334 251 aa15.85■□□□□ 0.13
Trim71-201ENSMUST00000111816 Sf3b6P59708 125 aaKnown RBP15.85■□□□□ 0.13
Trim71-201ENSMUST00000111816 Hdgfl3Q9JMG7 202 aa15.85■□□□□ 0.13
Trim71-201ENSMUST00000111816 Ighv5-17A0A075B5R1 117 aa15.85■□□□□ 0.13
Trim71-201ENSMUST00000111816 Xcl1P47993 114 aa15.85■□□□□ 0.13
Trim71-201ENSMUST00000111816 LgalslbQ7TPX9 165 aa15.85■□□□□ 0.13
Trim71-201ENSMUST00000111816 Hist1h2bfP10853 126 aa15.85■□□□□ 0.13
Trim71-201ENSMUST00000111816 Igfbp3P47878 292 aa15.85■□□□□ 0.13
Trim71-201ENSMUST00000111816 Gm614Q3V2K1 191 aa15.85■□□□□ 0.13
Trim71-201ENSMUST00000111816 Hist1h2bbQ64475 126 aa15.85■□□□□ 0.13
Trim71-201ENSMUST00000111816 Hist1h2bkQ8CGP1 126 aaKnown RBP15.85■□□□□ 0.13
Trim71-201ENSMUST00000111816 Hist1h2bpQ8CGP2 126 aaKnown RBP15.85■□□□□ 0.13
Trim71-201ENSMUST00000111816 Nat6Q9R123 314 aa15.85■□□□□ 0.13
Trim71-201ENSMUST00000111816 Igkv7-33P01632 114 aa15.85■□□□□ 0.13
Trim71-201ENSMUST00000111816 Col9a2Q07643 688 aa15.85■□□□□ 0.13
Trim71-201ENSMUST00000111816 Fam166aQ9D4K5 319 aa15.85■□□□□ 0.13
Trim71-201ENSMUST00000111816 Tex54G3UW99 86 aa15.84■□□□□ 0.13
Trim71-201ENSMUST00000111816 Gm21775J3KMK6 180 aa15.84■□□□□ 0.13
Trim71-201ENSMUST00000111816 MpzP27573 248 aa15.84■□□□□ 0.13
Trim71-201ENSMUST00000111816 Dtx4Q6PDK8 616 aa15.84■□□□□ 0.13
Trim71-201ENSMUST00000111816 Klk1b26P36369 261 aa15.84■□□□□ 0.13
Trim71-201ENSMUST00000111816 CortP56469 109 aa15.84■□□□□ 0.13
Trim71-201ENSMUST00000111816 4930596D02RikQ3V0H9 216 aa15.84■□□□□ 0.13
Trim71-201ENSMUST00000111816 Vstm2lQ6PDS0 220 aa15.84■□□□□ 0.13
Trim71-201ENSMUST00000111816 Klf5Q9Z0Z7 446 aaKnown RBP15.84■□□□□ 0.13
Trim71-201ENSMUST00000111816 Trbv3A0A0A6YYE2 117 aa15.84■□□□□ 0.13
Trim71-201ENSMUST00000111816 Umad1E0CX23 159 aa15.84■□□□□ 0.13
Trim71-201ENSMUST00000111816 Trav15-1-dv6-1Q5R1D2 117 aa15.84■□□□□ 0.13
Trim71-201ENSMUST00000111816 Parm1Q923D3 296 aa15.84■□□□□ 0.13
Trim71-201ENSMUST00000111816 Prr14lE9Q7C4 1971 aa15.84■□□□□ 0.13
Trim71-201ENSMUST00000111816 Znf629Q6A085 867 aa15.84■□□□□ 0.13
Trim71-201ENSMUST00000111816 Ssbp1Q9CYR0 152 aaKnown RBP15.84■□□□□ 0.13
Trim71-201ENSMUST00000111816 Tex48Q9DA81 110 aa15.84■□□□□ 0.13
Trim71-201ENSMUST00000111816 Rpl27aP14115 148 aaKnown RBP15.84■□□□□ 0.13
Trim71-201ENSMUST00000111816 Prss21Q9JHJ7 324 aa15.84■□□□□ 0.13
Trim71-201ENSMUST00000111816 Sumo3Q9Z172 110 aa15.84■□□□□ 0.13
Trim71-201ENSMUST00000111816 Trav8-1A0A075B641 109 aa15.83■□□□□ 0.13
Trim71-201ENSMUST00000111816 Ighv7-4A0A0A6YXL5 121 aa15.83■□□□□ 0.13
Trim71-201ENSMUST00000111816 SergefQ80YD6 464 aa15.83■□□□□ 0.13
Trim71-201ENSMUST00000111816 ApooQ9DCZ4 198 aa15.83■□□□□ 0.13
Trim71-201ENSMUST00000111816 Plxna3P70208 1872 aa15.83■□□□□ 0.13
Trim71-201ENSMUST00000111816 Gm45871A0A1B0GRI9 540 aa15.83■□□□□ 0.13
Trim71-201ENSMUST00000111816 Sp9Q64HY3 484 aa15.83■□□□□ 0.13
Trim71-201ENSMUST00000111816 Dcaf10A2AKB9 566 aa15.83■□□□□ 0.12
Trim71-201ENSMUST00000111816 HilpdaQ9JLS0 64 aa15.83■□□□□ 0.12
Trim71-201ENSMUST00000111816 Igkv4-90A0A075B5L3 117 aa15.83■□□□□ 0.12
Trim71-201ENSMUST00000111816 Tac3P55099 116 aa15.83■□□□□ 0.12
Trim71-201ENSMUST00000111816 Smim19Q80ZU4 107 aa15.83■□□□□ 0.12
Trim71-201ENSMUST00000111816 Olfr984Q8VFN1 314 aa15.83■□□□□ 0.12
Trim71-201ENSMUST00000111816 Ighv1-67A0A0G2JFN9 117 aa15.83■□□□□ 0.12
Trim71-201ENSMUST00000111816 Fam3dP97805 223 aa15.83■□□□□ 0.12
Trim71-201ENSMUST00000111816 Efnb1P52795 345 aa15.83■□□□□ 0.12
Trim71-201ENSMUST00000111816 Gm904Q3V2L5 102 aa15.83■□□□□ 0.12
Trim71-201ENSMUST00000111816 Cox19Q8K0C8 92 aa15.83■□□□□ 0.12
Trim71-201ENSMUST00000111816 Nr2c2apQ3TV70 140 aa15.83■□□□□ 0.12
Retrieved 100 of 22,080 RNA–protein pairs in 30.5 ms