Protein–RNA interactions for Protein: A0A075B626

Trav12n-2, T cell receptor alpha variable 12D-2, mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12n-2A0A075B626 Gm25239-201ENSMUST00000174915 86 ntBASIC33,74■■■□□ 2,99
Trav12n-2A0A075B626 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC31,04■■■□□ 2,56
Trav12n-2A0A075B626 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC30,68■■■□□ 2,5
Trav12n-2A0A075B626 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC30,66■■■□□ 2,5
Trav12n-2A0A075B626 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC29,96■■■□□ 2,39
Trav12n-2A0A075B626 Gm15042-201ENSMUST00000120212 883 ntBASIC29,82■■■□□ 2,36
Trav12n-2A0A075B626 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC29,67■■■□□ 2,34
Trav12n-2A0A075B626 Gm15045-201ENSMUST00000117359 883 ntBASIC29,21■■■□□ 2,27
Trav12n-2A0A075B626 Gm24109-201ENSMUST00000175489 103 ntBASIC29,08■■■□□ 2,25
Trav12n-2A0A075B626 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC28,8■■■□□ 2,2
Trav12n-2A0A075B626 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC28,74■■■□□ 2,19
Trav12n-2A0A075B626 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC28,46■■■□□ 2,15
Trav12n-2A0A075B626 Psd-208ENSMUST00000224556 2034 ntBASIC28,4■■■□□ 2,14
Trav12n-2A0A075B626 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC28,31■■■□□ 2,12
Trav12n-2A0A075B626 Gm23366-201ENSMUST00000175022 89 ntBASIC28,24■■■□□ 2,11
Trav12n-2A0A075B626 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC28,22■■■□□ 2,11
Trav12n-2A0A075B626 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC28,12■■■□□ 2,09
Trav12n-2A0A075B626 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC28,11■■■□□ 2,09
Trav12n-2A0A075B626 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC28,08■■■□□ 2,09
Trav12n-2A0A075B626 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC27,93■■■□□ 2,06
Trav12n-2A0A075B626 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC27,86■■■□□ 2,05
Trav12n-2A0A075B626 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC27,78■■■□□ 2,04
Trav12n-2A0A075B626 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC27,75■■■□□ 2,03
Trav12n-2A0A075B626 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC27,69■■■□□ 2,02
Trav12n-2A0A075B626 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC27,66■■■□□ 2,02
Trav12n-2A0A075B626 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC27,62■■■□□ 2,01
Trav12n-2A0A075B626 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC27,59■■■□□ 2,01
Trav12n-2A0A075B626 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC27,52■■■□□ 2
Trav12n-2A0A075B626 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC27,47■■□□□ 1,99
Trav12n-2A0A075B626 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC27,44■■□□□ 1,98
Trav12n-2A0A075B626 AC153911.1-202ENSMUST00000218534 1034 ntBASIC27,35■■□□□ 1,97
Trav12n-2A0A075B626 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC27,25■■□□□ 1,95
Trav12n-2A0A075B626 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC27,25■■□□□ 1,95
Trav12n-2A0A075B626 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC27,1■■□□□ 1,93
Trav12n-2A0A075B626 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC26,89■■□□□ 1,9
Trav12n-2A0A075B626 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC26,81■■□□□ 1,88
Trav12n-2A0A075B626 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC26,8■■□□□ 1,88
Trav12n-2A0A075B626 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC26,78■■□□□ 1,88
Trav12n-2A0A075B626 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC26,77■■□□□ 1,88
Trav12n-2A0A075B626 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC26,76■■□□□ 1,87
Trav12n-2A0A075B626 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC26,69■■□□□ 1,86
Trav12n-2A0A075B626 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC26,66■■□□□ 1,86
Trav12n-2A0A075B626 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC26,61■■□□□ 1,85
Trav12n-2A0A075B626 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC26,59■■□□□ 1,85
Trav12n-2A0A075B626 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC26,58■■□□□ 1,84
Trav12n-2A0A075B626 Gm25238-201ENSMUST00000174914 89 ntBASIC26,52■■□□□ 1,84
Trav12n-2A0A075B626 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC26,49■■□□□ 1,83
Trav12n-2A0A075B626 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC26,48■■□□□ 1,83
Trav12n-2A0A075B626 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC26,48■■□□□ 1,83
Trav12n-2A0A075B626 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC26,39■■□□□ 1,82
Trav12n-2A0A075B626 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC26,39■■□□□ 1,81
Trav12n-2A0A075B626 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC26,35■■□□□ 1,81
Trav12n-2A0A075B626 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC26,35■■□□□ 1,81
Trav12n-2A0A075B626 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC26,33■■□□□ 1,81
Trav12n-2A0A075B626 Gm10524-201ENSMUST00000181931 1893 ntBASIC26,32■■□□□ 1,8
Trav12n-2A0A075B626 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC26,2■■□□□ 1,79
Trav12n-2A0A075B626 Gm27325-201ENSMUST00000175467 74 ntBASIC26,2■■□□□ 1,78
Trav12n-2A0A075B626 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC26,12■■□□□ 1,77
Trav12n-2A0A075B626 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC26,11■■□□□ 1,77
Trav12n-2A0A075B626 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC26,11■■□□□ 1,77
Trav12n-2A0A075B626 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC26,06■■□□□ 1,76
Trav12n-2A0A075B626 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC26,05■■□□□ 1,76
Trav12n-2A0A075B626 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC26,04■■□□□ 1,76
Trav12n-2A0A075B626 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC26,02■■□□□ 1,76
Trav12n-2A0A075B626 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC26■■□□□ 1,75
Trav12n-2A0A075B626 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1,75
Trav12n-2A0A075B626 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC25,94■■□□□ 1,74
Trav12n-2A0A075B626 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC25,89■■□□□ 1,74
Trav12n-2A0A075B626 CT025624.2-201ENSMUST00000223609 1909 ntBASIC25,88■■□□□ 1,73
Trav12n-2A0A075B626 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC25,85■■□□□ 1,73
Trav12n-2A0A075B626 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC25,85■■□□□ 1,73
Trav12n-2A0A075B626 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC25,83■■□□□ 1,73
Trav12n-2A0A075B626 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC25,8■■□□□ 1,72
Trav12n-2A0A075B626 Gm42596-201ENSMUST00000196305 1958 ntBASIC25,78■■□□□ 1,72
Trav12n-2A0A075B626 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC25,77■■□□□ 1,72
Trav12n-2A0A075B626 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC25,76■■□□□ 1,71
Trav12n-2A0A075B626 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC25,73■■□□□ 1,71
Trav12n-2A0A075B626 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC25,73■■□□□ 1,71
Trav12n-2A0A075B626 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC25,69■■□□□ 1,7
Trav12n-2A0A075B626 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC25,59■■□□□ 1,69
Trav12n-2A0A075B626 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC25,57■■□□□ 1,68
Trav12n-2A0A075B626 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC25,55■■□□□ 1,68
Trav12n-2A0A075B626 Rab21-202ENSMUST00000218831 843 ntBASIC25,51■■□□□ 1,67
Trav12n-2A0A075B626 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC25,46■■□□□ 1,67
Trav12n-2A0A075B626 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC25,46■■□□□ 1,67
Trav12n-2A0A075B626 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC25,44■■□□□ 1,66
Trav12n-2A0A075B626 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC25,38■■□□□ 1,65
Trav12n-2A0A075B626 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC25,36■■□□□ 1,65
Trav12n-2A0A075B626 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC25,32■■□□□ 1,64
Trav12n-2A0A075B626 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC25,27■■□□□ 1,64
Trav12n-2A0A075B626 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC25,27■■□□□ 1,64
Trav12n-2A0A075B626 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC25,26■■□□□ 1,63
Trav12n-2A0A075B626 Gm25262-201ENSMUST00000174934 133 ntBASIC25,25■■□□□ 1,63
Trav12n-2A0A075B626 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC25,24■■□□□ 1,63
Trav12n-2A0A075B626 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC25,23■■□□□ 1,63
Trav12n-2A0A075B626 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC25,23■■□□□ 1,63
Trav12n-2A0A075B626 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC25,21■■□□□ 1,63
Trav12n-2A0A075B626 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC25,19■■□□□ 1,62
Trav12n-2A0A075B626 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC25,15■■□□□ 1,62
Trav12n-2A0A075B626 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC25,13■■□□□ 1,61
Retrieved 100 of 76,532 protein–RNA pairs in 28,6 ms