RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Mpig6bD7PDD4 242 aa14.21□□□□□ -0.13
Ccdc88a-201ENSMUST00000040182 Olfr92L7N475 312 aa14.21□□□□□ -0.13
Ccdc88a-201ENSMUST00000040182 B020031M17RikQ3UT11 173 aa14.21□□□□□ -0.13
Ccdc88a-201ENSMUST00000040182 Slc35d2Q762D5 326 aa14.21□□□□□ -0.13
Ccdc88a-201ENSMUST00000040182 Tmem95P0DJF3 176 aa14.21□□□□□ -0.13
Ccdc88a-201ENSMUST00000040182 Arl14epQ8BIX3 276 aa14.21□□□□□ -0.13
Ccdc88a-201ENSMUST00000040182 Rnd2Q9QYM5 227 aa14.21□□□□□ -0.13
Ccdc88a-201ENSMUST00000040182 Gm9772F6XPD8 135 aa14.21□□□□□ -0.13
Ccdc88a-201ENSMUST00000040182 Prr23a3Q9CWP9 254 aa14.21□□□□□ -0.13
Ccdc88a-201ENSMUST00000040182 MyofQ69ZN7 2048 aaKnown RBP14.21□□□□□ -0.13
Ccdc88a-201ENSMUST00000040182 Olfr399Q7TRX3 311 aa14.21□□□□□ -0.13
Ccdc88a-201ENSMUST00000040182 Tanc2A2A690 1994 aa14.21□□□□□ -0.13
Ccdc88a-201ENSMUST00000040182 Defb21Q8C5Z4 100 aa14.21□□□□□ -0.13
Ccdc88a-201ENSMUST00000040182 9330161L09RikQ9D253 136 aa14.21□□□□□ -0.13
Ccdc88a-201ENSMUST00000040182 Gm10665K7N6B7 321 aa14.21□□□□□ -0.14
Ccdc88a-201ENSMUST00000040182 Vamp8O70404 101 aa14.21□□□□□ -0.14
Ccdc88a-201ENSMUST00000040182 Gm5111Q8C9M4 190 aa14.21□□□□□ -0.14
Ccdc88a-201ENSMUST00000040182 Klf7Q99JB0 301 aa14.21□□□□□ -0.14
Ccdc88a-201ENSMUST00000040182 Hhipl1Q14DK5 791 aa14.2□□□□□ -0.14
Ccdc88a-201ENSMUST00000040182 BC049730Q810N3 246 aa14.2□□□□□ -0.14
Ccdc88a-201ENSMUST00000040182 5930422O12RikQ8C4Y4 123 aa14.2□□□□□ -0.14
Ccdc88a-201ENSMUST00000040182 Tnfrsf12aQ9CR75 129 aa14.2□□□□□ -0.14
Ccdc88a-201ENSMUST00000040182 AponG3X9D6 251 aa14.2□□□□□ -0.14
Ccdc88a-201ENSMUST00000040182 CampP51437 172 aa14.2□□□□□ -0.14
Ccdc88a-201ENSMUST00000040182 Ceacam10Q61400 265 aa14.2□□□□□ -0.14
Ccdc88a-201ENSMUST00000040182 Olfr875Q7TRE5 310 aa14.2□□□□□ -0.14
Ccdc88a-201ENSMUST00000040182 Dleu7Q8CHZ8 209 aa14.2□□□□□ -0.14
Ccdc88a-201ENSMUST00000040182 Trpt1Q8K3A2 249 aa14.2□□□□□ -0.14
Ccdc88a-201ENSMUST00000040182 Iah1Q9DB29 249 aa14.2□□□□□ -0.14
Ccdc88a-201ENSMUST00000040182 Fam53aE9PV82 402 aa14.2□□□□□ -0.14
Ccdc88a-201ENSMUST00000040182 Cd81P35762 236 aa14.2□□□□□ -0.14
Ccdc88a-201ENSMUST00000040182 H2afb1Q9CQ70 111 aa14.2□□□□□ -0.14
Ccdc88a-201ENSMUST00000040182 Olfr530Q8VFE8 307 aa14.2□□□□□ -0.14
Ccdc88a-201ENSMUST00000040182 AgrnA2ASQ1 1950 aa14.2□□□□□ -0.14
Ccdc88a-201ENSMUST00000040182 Ubald2Q8BQH4 164 aa14.2□□□□□ -0.14
Ccdc88a-201ENSMUST00000040182 Igkv12-38A0A0G2JEI7 115 aa14.2□□□□□ -0.14
Ccdc88a-201ENSMUST00000040182 Gm2381G3UY53 305 aa14.2□□□□□ -0.14
Ccdc88a-201ENSMUST00000040182 Pet100P0DJE0 76 aa14.2□□□□□ -0.14
Ccdc88a-201ENSMUST00000040182 BivmQ8CBX9 502 aa14.2□□□□□ -0.14
Ccdc88a-201ENSMUST00000040182 Gm42543A0A0G2JET4 117 aa14.2□□□□□ -0.14
Ccdc88a-201ENSMUST00000040182 Vmn1r216Q8R257 298 aa14.2□□□□□ -0.14
Ccdc88a-201ENSMUST00000040182 Olfr195Q8VGQ6 308 aa14.2□□□□□ -0.14
Ccdc88a-201ENSMUST00000040182 Osr1Q9WVG7 266 aa14.2□□□□□ -0.14
Ccdc88a-201ENSMUST00000040182 Gm10799F7C7U2 104 aa14.19□□□□□ -0.14
Ccdc88a-201ENSMUST00000040182 Dopey1Q8BL99 2399 aa14.19□□□□□ -0.14
Ccdc88a-201ENSMUST00000040182 Trav4-2A0A075B638 110 aa14.19□□□□□ -0.14
Ccdc88a-201ENSMUST00000040182 6330409D20RikA2AK85 162 aa14.19□□□□□ -0.14
Ccdc88a-201ENSMUST00000040182 CiartQ3TQ03 375 aa14.19□□□□□ -0.14
Ccdc88a-201ENSMUST00000040182 Klk10Q99M20 278 aa14.19□□□□□ -0.14
Ccdc88a-201ENSMUST00000040182 Zfp950A0A0U1RQ46 609 aa14.19□□□□□ -0.14
Ccdc88a-201ENSMUST00000040182 Hoxa5P09021 270 aa14.19□□□□□ -0.14
Ccdc88a-201ENSMUST00000040182 Cbln1Q9R171 193 aa14.19□□□□□ -0.14
Ccdc88a-201ENSMUST00000040182 H3BKT1 185 aa14.19□□□□□ -0.14
Ccdc88a-201ENSMUST00000040182 Cd5P13379 494 aa14.19□□□□□ -0.14
Ccdc88a-201ENSMUST00000040182 Bcorl1A2AQH4 1781 aa14.19□□□□□ -0.14
Ccdc88a-201ENSMUST00000040182 Esp24A8R0V6 68 aa14.19□□□□□ -0.14
Ccdc88a-201ENSMUST00000040182 Cd8bP10300 213 aa14.19□□□□□ -0.14
Ccdc88a-201ENSMUST00000040182 Tbr1Q64336 681 aa14.19□□□□□ -0.14
Ccdc88a-201ENSMUST00000040182 Tmem177Q8BPE4 311 aa14.19□□□□□ -0.14
Ccdc88a-201ENSMUST00000040182 LctF8VPT3 1931 aa14.19□□□□□ -0.14
Ccdc88a-201ENSMUST00000040182 Tmem74bA2AU34 232 aa14.19□□□□□ -0.14
Ccdc88a-201ENSMUST00000040182 P01801 115 aa14.19□□□□□ -0.14
Ccdc88a-201ENSMUST00000040182 Csn3P06796 181 aa14.19□□□□□ -0.14
Ccdc88a-201ENSMUST00000040182 Olfr1168Q7TR25 312 aa14.19□□□□□ -0.14
Ccdc88a-201ENSMUST00000040182 Unc119Q9Z2R6 240 aa14.19□□□□□ -0.14
Ccdc88a-201ENSMUST00000040182 Gm20854Q62461 227 aa14.18□□□□□ -0.14
Ccdc88a-201ENSMUST00000040182 Tmem88bQ3TYP4 173 aa14.18□□□□□ -0.14
Ccdc88a-201ENSMUST00000040182 AdipoqQ60994 247 aa14.18□□□□□ -0.14
Ccdc88a-201ENSMUST00000040182 Gm4791J3QQ14 102 aa14.18□□□□□ -0.14
Ccdc88a-201ENSMUST00000040182 Lbhd2G3UW55 114 aa14.18□□□□□ -0.14
Ccdc88a-201ENSMUST00000040182 Foxa2P35583 459 aa14.18□□□□□ -0.14
Ccdc88a-201ENSMUST00000040182 Shisa6Q3UH99 525 aa14.18□□□□□ -0.14
Ccdc88a-201ENSMUST00000040182 Faap20Q3UN58 186 aa14.18□□□□□ -0.14
Ccdc88a-201ENSMUST00000040182 Prrc2aQ7TSC1 2158 aaKnown RBP14.18□□□□□ -0.14
Ccdc88a-201ENSMUST00000040182 Gm45785A0A1B0GT05 94 aa14.18□□□□□ -0.14
Ccdc88a-201ENSMUST00000040182 Bet1lO35153 111 aa14.18□□□□□ -0.14
Ccdc88a-201ENSMUST00000040182 Ripply2Q2WG76 128 aa14.18□□□□□ -0.14
Ccdc88a-201ENSMUST00000040182 D830044I16RikA0A1D5RM53 117 aa14.18□□□□□ -0.14
Ccdc88a-201ENSMUST00000040182 Rgp1Q8BHT7 391 aa14.18□□□□□ -0.14
Ccdc88a-201ENSMUST00000040182 Gm9944Q8C559 102 aa14.18□□□□□ -0.14
Ccdc88a-201ENSMUST00000040182 Olfr747E9PXH6 313 aa14.17□□□□□ -0.14
Ccdc88a-201ENSMUST00000040182 MymxQ2Q5T5 84 aa14.17□□□□□ -0.14
Ccdc88a-201ENSMUST00000040182 HelzQ6DFV5 1964 aaKnown RBP14.17□□□□□ -0.14
Ccdc88a-201ENSMUST00000040182 Ighv1-47A0A0A6YY41 117 aa14.17□□□□□ -0.14
Ccdc88a-201ENSMUST00000040182 Gm7849D3YX03 116 aa14.17□□□□□ -0.14
Ccdc88a-201ENSMUST00000040182 Mmp23O88676 391 aa14.17□□□□□ -0.14
Ccdc88a-201ENSMUST00000040182 Hoxb3P09026 433 aa14.17□□□□□ -0.14
Ccdc88a-201ENSMUST00000040182 Olfr322Q5NCC8 327 aa14.17□□□□□ -0.14
Ccdc88a-201ENSMUST00000040182 Megf10Q6DIB5 1147 aa14.17□□□□□ -0.14
Ccdc88a-201ENSMUST00000040182 Eml6Q5SQM0 1958 aa14.17□□□□□ -0.14
Ccdc88a-201ENSMUST00000040182 9830107B12RikD3Z5D6 160 aa14.17□□□□□ -0.14
Ccdc88a-201ENSMUST00000040182 Olfr235E9Q9Z6 312 aa14.17□□□□□ -0.14
Ccdc88a-201ENSMUST00000040182 Znf385aQ8VD12 386 aaKnown RBP14.17□□□□□ -0.14
Ccdc88a-201ENSMUST00000040182 Trdv2-1A0A0G2JGB9 116 aa14.17□□□□□ -0.14
Ccdc88a-201ENSMUST00000040182 Gstp2P46425 210 aa14.17□□□□□ -0.14
Ccdc88a-201ENSMUST00000040182 Npc2Q9Z0J0 149 aa14.17□□□□□ -0.14
Ccdc88a-201ENSMUST00000040182 Olfr1016A2ASV2 309 aa14.17□□□□□ -0.14
Ccdc88a-201ENSMUST00000040182 PlnP61014 52 aa14.17□□□□□ -0.14
Ccdc88a-201ENSMUST00000040182 C1qtnf9Q4ZJN1 333 aa14.17□□□□□ -0.14
Ccdc88a-201ENSMUST00000040182 Olfr1012Q8VFJ7 311 aa14.17□□□□□ -0.14
Retrieved 100 of 22,080 RNA–protein pairs in 44.2 ms