RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 Olfr1183Q8VFF8 303 aa15.36■□□□□ 0.05
Shkbp1-201ENSMUST00000003857 Higd1bQ99JY6 98 aa15.36■□□□□ 0.05
Shkbp1-201ENSMUST00000003857 Eny2Q9JIX0 101 aaKnown RBP15.36■□□□□ 0.05
Shkbp1-201ENSMUST00000003857 AmelxP63277 210 aa15.35■□□□□ 0.05
Shkbp1-201ENSMUST00000003857 Spink11Q09TK7 88 aa15.35■□□□□ 0.05
Shkbp1-201ENSMUST00000003857 Tff3Q62395 81 aa15.35■□□□□ 0.05
Shkbp1-201ENSMUST00000003857 Znf146Q8BQN6 292 aa15.35■□□□□ 0.05
Shkbp1-201ENSMUST00000003857 Pnpla3Q91WW7 413 aa15.35■□□□□ 0.05
Shkbp1-201ENSMUST00000003857 Prss28Q924N9 274 aa15.35■□□□□ 0.05
Shkbp1-201ENSMUST00000003857 Lmntd1Q9D4C1 413 aa15.35■□□□□ 0.05
Shkbp1-201ENSMUST00000003857 Ccl28Q9JIL2 130 aa15.35■□□□□ 0.05
Shkbp1-201ENSMUST00000003857 Hsd17b6Q9R092 317 aa15.35■□□□□ 0.05
Shkbp1-201ENSMUST00000003857 Asxl3Q8C4A5 2259 aa15.35■□□□□ 0.05
Shkbp1-201ENSMUST00000003857 Tmem52bQ0VBF2 186 aa15.35■□□□□ 0.05
Shkbp1-201ENSMUST00000003857 Gm16686Q3UMN9 131 aa15.35■□□□□ 0.05
Shkbp1-201ENSMUST00000003857 Rph3alQ768S4 302 aa15.35■□□□□ 0.05
Shkbp1-201ENSMUST00000003857 Vmn1r222Q8R269 308 aa15.35■□□□□ 0.05
Shkbp1-201ENSMUST00000003857 GgctQ9D7X8 188 aa15.35■□□□□ 0.05
Shkbp1-201ENSMUST00000003857 Mettl9Q9EPL4 318 aa15.35■□□□□ 0.05
Shkbp1-201ENSMUST00000003857 Ighv6-3A0A075B5T2 118 aa15.34■□□□□ 0.05
Shkbp1-201ENSMUST00000003857 Ren2P00796 401 aa15.34■□□□□ 0.05
Shkbp1-201ENSMUST00000003857 ApcsP12246 224 aa15.34■□□□□ 0.05
Shkbp1-201ENSMUST00000003857 Prss3Q792Z0 246 aaKnown RBP15.34■□□□□ 0.05
Shkbp1-201ENSMUST00000003857 Pygo2Q80V76 405 aa15.34■□□□□ 0.05
Shkbp1-201ENSMUST00000003857 Olfr1475Q8VEV6 314 aa15.34■□□□□ 0.05
Shkbp1-201ENSMUST00000003857 Rab4bQ91ZR1 213 aa15.34■□□□□ 0.05
Shkbp1-201ENSMUST00000003857 Defa-rs2P17534 91 aa15.34■□□□□ 0.05
Shkbp1-201ENSMUST00000003857 StumQ0VBF8 141 aa15.34■□□□□ 0.05
Shkbp1-201ENSMUST00000003857 Sf3a2Q62203 475 aaKnown RBP15.34■□□□□ 0.05
Shkbp1-201ENSMUST00000003857 Il31Q6EAL8 163 aa15.34■□□□□ 0.05
Shkbp1-201ENSMUST00000003857 Bud31Q6PGH1 103 aa15.34■□□□□ 0.05
Shkbp1-201ENSMUST00000003857 Olfr1339Q8VGB1 315 aa15.34■□□□□ 0.05
Shkbp1-201ENSMUST00000003857 Kcnk5Q9JK62 502 aa15.34■□□□□ 0.05
Shkbp1-201ENSMUST00000003857 Gm36368A0A1D5RLK8 91 aa15.33■□□□□ 0.04
Shkbp1-201ENSMUST00000003857 Awat1A2ADU9 328 aa15.33■□□□□ 0.04
Shkbp1-201ENSMUST00000003857 Vmn1r232A2RTT5 351 aa15.33■□□□□ 0.04
Shkbp1-201ENSMUST00000003857 Gm28051J3QMA2 81 aa15.33■□□□□ 0.04
Shkbp1-201ENSMUST00000003857 Gm4133K9J7G6 307 aa15.33■□□□□ 0.04
Shkbp1-201ENSMUST00000003857 Map1bP14873 2464 aaKnown RBP15.33■□□□□ 0.04
Shkbp1-201ENSMUST00000003857 SelenotP62342 195 aa15.33■□□□□ 0.04
Shkbp1-201ENSMUST00000003857 Cd96Q3U0X8 602 aa15.33■□□□□ 0.04
Shkbp1-201ENSMUST00000003857 Arl11Q6P3A9 176 aa15.33■□□□□ 0.04
Shkbp1-201ENSMUST00000003857 Ifna12Q80SS5 189 aa15.33■□□□□ 0.04
Shkbp1-201ENSMUST00000003857 Olfr822Q8VFU1 312 aa15.33■□□□□ 0.04
Shkbp1-201ENSMUST00000003857 Olfr1413Q8VGU3 323 aa15.33■□□□□ 0.04
Shkbp1-201ENSMUST00000003857 Q9CQ90 155 aa15.33■□□□□ 0.04
Shkbp1-201ENSMUST00000003857 Tmem167aQ9CR64 72 aa15.33■□□□□ 0.04
Shkbp1-201ENSMUST00000003857 Cbln1Q9R171 193 aa15.33■□□□□ 0.04
Shkbp1-201ENSMUST00000003857 Pus1Q9WU56 423 aa15.33■□□□□ 0.04
Shkbp1-201ENSMUST00000003857 Evi2aP20934 223 aa15.33■□□□□ 0.04
Shkbp1-201ENSMUST00000003857 Zfp420Q7TMN8 578 aa15.33■□□□□ 0.04
Shkbp1-201ENSMUST00000003857 Ankrd33Q8BXP5 385 aa15.33■□□□□ 0.04
Shkbp1-201ENSMUST00000003857 Lurap1Q9D6I9 239 aa15.33■□□□□ 0.04
Shkbp1-201ENSMUST00000003857 Prr30Q9D9B7 401 aa15.33■□□□□ 0.04
Shkbp1-201ENSMUST00000003857 Rnf125Q9D9R0 233 aa15.33■□□□□ 0.04
Shkbp1-201ENSMUST00000003857 Ly96Q9JHF9 160 aa15.33■□□□□ 0.04
Shkbp1-201ENSMUST00000003857 Cep295Q8BQ48 2412 aa15.32■□□□□ 0.04
Shkbp1-201ENSMUST00000003857 P01789 122 aa15.32■□□□□ 0.04
Shkbp1-201ENSMUST00000003857 Fa2hQ5MPP0 372 aa15.32■□□□□ 0.04
Shkbp1-201ENSMUST00000003857 PaxxQ8K0Y7 205 aa15.32■□□□□ 0.04
Shkbp1-201ENSMUST00000003857 Uqcc3Q8K2T4 89 aa15.32■□□□□ 0.04
Shkbp1-201ENSMUST00000003857 Olfr1404Q8VGE1 313 aa15.32■□□□□ 0.04
Shkbp1-201ENSMUST00000003857 Actl6bQ99MR0 426 aa15.32■□□□□ 0.04
Shkbp1-201ENSMUST00000003857 Nicn1Q9CQM0 213 aa15.32■□□□□ 0.04
Shkbp1-201ENSMUST00000003857 Zcchc10Q9CX48 178 aa15.32■□□□□ 0.04
Shkbp1-201ENSMUST00000003857 Tmem190Q9D2E9 166 aa15.32■□□□□ 0.04
Shkbp1-201ENSMUST00000003857 Gp2Q9D733 531 aa15.32■□□□□ 0.04
Shkbp1-201ENSMUST00000003857 Prss37Q9DAA4 237 aa15.32■□□□□ 0.04
Shkbp1-201ENSMUST00000003857 Rnf7Q9WTZ1 113 aa15.32■□□□□ 0.04
Shkbp1-201ENSMUST00000003857 Dnajc13D4AFX7 2248 aaKnown RBP15.32■□□□□ 0.04
Shkbp1-201ENSMUST00000003857 Gm3045A0A1D5RMA1 209 aa15.32■□□□□ 0.04
Shkbp1-201ENSMUST00000003857 Olfr1024A2ASU7 327 aa15.32■□□□□ 0.04
Shkbp1-201ENSMUST00000003857 Tbx19Q99ME7 446 aa15.32■□□□□ 0.04
Shkbp1-201ENSMUST00000003857 Chchd1Q9CQA6 118 aa15.32■□□□□ 0.04
Shkbp1-201ENSMUST00000003857 Psg18B2RSG7 476 aa15.31■□□□□ 0.04
Shkbp1-201ENSMUST00000003857 Aqp7O54794 303 aa15.31■□□□□ 0.04
Shkbp1-201ENSMUST00000003857 P04942 107 aa15.31■□□□□ 0.04
Shkbp1-201ENSMUST00000003857 BsgP18572 389 aaKnown RBP15.31■□□□□ 0.04
Shkbp1-201ENSMUST00000003857 CapgP24452 352 aaKnown RBP15.31■□□□□ 0.04
Shkbp1-201ENSMUST00000003857 Stfa1P35175 97 aa15.31■□□□□ 0.04
Shkbp1-201ENSMUST00000003857 Spam1P48794 512 aa15.31■□□□□ 0.04
Shkbp1-201ENSMUST00000003857 Nkx3-1P97436 237 aa15.31■□□□□ 0.04
Shkbp1-201ENSMUST00000003857 Hist2h2beQ64524 126 aa15.31■□□□□ 0.04
Shkbp1-201ENSMUST00000003857 IqcjQ8BPW0 110 aa15.31■□□□□ 0.04
Shkbp1-201ENSMUST00000003857 Dmrtc2Q8CGW9 370 aa15.31■□□□□ 0.04
Shkbp1-201ENSMUST00000003857 Ighv5-12-4A0A0A6YWG4 117 aa15.31■□□□□ 0.04
Shkbp1-201ENSMUST00000003857 Olfr1154L7MU57 310 aa15.31■□□□□ 0.04
Shkbp1-201ENSMUST00000003857 Tcf21O35437 179 aa15.31■□□□□ 0.04
Shkbp1-201ENSMUST00000003857 Wt1P22561 449 aa15.31■□□□□ 0.04
Shkbp1-201ENSMUST00000003857 SmagpQ99KC7 97 aa15.31■□□□□ 0.04
Shkbp1-201ENSMUST00000003857 H2al3Q9D4U4 128 aa15.31■□□□□ 0.04
Shkbp1-201ENSMUST00000003857 Nubp1Q9R060 320 aa15.31■□□□□ 0.04
Shkbp1-201ENSMUST00000003857 CideaO70302 217 aa15.3■□□□□ 0.04
Shkbp1-201ENSMUST00000003857 P01915 264 aa15.3■□□□□ 0.04
Shkbp1-201ENSMUST00000003857 Timp3P39876 211 aa15.3■□□□□ 0.04
Shkbp1-201ENSMUST00000003857 Ube2d2bQ6ZWY6 147 aa15.3■□□□□ 0.04
Shkbp1-201ENSMUST00000003857 Tmem167bQ80X45 74 aa15.3■□□□□ 0.04
Shkbp1-201ENSMUST00000003857 5930422O12RikQ8C4Y4 123 aa15.3■□□□□ 0.04
Shkbp1-201ENSMUST00000003857 Olfr346Q8VGJ7 309 aa15.3■□□□□ 0.04
Shkbp1-201ENSMUST00000003857 Scgb1b15A0A087WP50 93 aa15.29■□□□□ 0.04
Retrieved 100 of 22,080 RNA–protein pairs in 64.5 ms