RNA–Protein interactions for RNA: ENST00000623788.1

ERCC6-212, Transcript of ERCC excision repair 6, chromatin remodeling factor, humanhuman

TSL 4

Gene ERCC6, Length 562 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6-212ENST00000623788 COMMD3Q9UBI1 195 aa0.27□□□□□ -2.37
ERCC6-212ENST00000623788 MACF1Q9UPN3 7388 aaKnown RBP0.27□□□□□ -2.37
ERCC6-212ENST00000623788 REV3LO60673 3130 aa0.27□□□□□ -2.37
ERCC6-212ENST00000623788 BLMP54132 1417 aaPredicted RBP0.27□□□□□ -2.37
ERCC6-212ENST00000623788 MED14O60244 1454 aa0.27□□□□□ -2.37
ERCC6-212ENST00000623788 PTPRMP28827 1452 aa0.27□□□□□ -2.37
ERCC6-212ENST00000623788 ABCC10Q5T3U5 1492 aa0.27□□□□□ -2.37
ERCC6-212ENST00000623788 HYDINQ4G0P3 5121 aa0.26□□□□□ -2.37
ERCC6-212ENST00000623788 NEBP20929 6669 aa0.26□□□□□ -2.37
ERCC6-212ENST00000623788 GPR98Q8WXG9 6306 aa0.26□□□□□ -2.37
ERCC6-212ENST00000623788 UTRNP46939 3433 aa0.26□□□□□ -2.37
ERCC6-212ENST00000623788 HIGD1CA8MV81 97 aa0.26□□□□□ -2.37
ERCC6-212ENST00000623788 LY6G6CO95867 125 aa0.26□□□□□ -2.37
ERCC6-212ENST00000623788 LSM3P62310 102 aaKnown RBP0.26□□□□□ -2.37
ERCC6-212ENST00000623788 RPS28P62857 69 aaKnown RBP0.26□□□□□ -2.37
ERCC6-212ENST00000623788 RHOHQ15669 191 aa0.26□□□□□ -2.37
ERCC6-212ENST00000623788 LYPD5Q6UWN5 251 aa0.26□□□□□ -2.37
ERCC6-212ENST00000623788 SETBP1Q9Y6X0 1596 aa0.26□□□□□ -2.37
ERCC6-212ENST00000623788 ABCA13Q86UQ4 5058 aa0.26□□□□□ -2.37
ERCC6-212ENST00000623788 DNHD1Q96M86 4753 aa0.25□□□□□ -2.37
ERCC6-212ENST00000623788 KDM5CP41229 1560 aa0.25□□□□□ -2.37
ERCC6-212ENST00000623788 GAPVD1Q14C86 1478 aa0.25□□□□□ -2.37
ERCC6-212ENST00000623788 BCL9LQ86UU0 1499 aa0.25□□□□□ -2.37
ERCC6-212ENST00000623788 RALGAPBQ86X10 1494 aa0.25□□□□□ -2.37
ERCC6-212ENST00000623788 MED23Q9ULK4 1368 aa0.25□□□□□ -2.37
ERCC6-212ENST00000623788 LOC101927531A0A1B0GV80 90 aa0.25□□□□□ -2.37
ERCC6-212ENST00000623788 TMEM30CPA0ZSE6 113 aa0.25□□□□□ -2.37
ERCC6-212ENST00000623788 UQCRQO14949 82 aa0.25□□□□□ -2.37
ERCC6-212ENST00000623788 EDF1O60869 148 aaKnown RBP0.25□□□□□ -2.37
ERCC6-212ENST00000623788 SAMD13Q5VXD3 122 aa0.25□□□□□ -2.37
ERCC6-212ENST00000623788 DEFB123Q8N688 67 aa0.25□□□□□ -2.37
ERCC6-212ENST00000623788 OR8J3Q8NGG0 315 aa0.25□□□□□ -2.37
ERCC6-212ENST00000623788 PRO3102Q9H379 93 aa0.25□□□□□ -2.37
ERCC6-212ENST00000623788 VCANP13611 3396 aa0.25□□□□□ -2.37
ERCC6-212ENST00000623788 MUC3AQ02505 3323 aa0.25□□□□□ -2.37
ERCC6-212ENST00000623788 PIEZO1Q92508 2521 aa0.25□□□□□ -2.37
ERCC6-212ENST00000623788 MYH1P12882 1939 aa0.25□□□□□ -2.37
ERCC6-212ENST00000623788 TRANK1O15050 2925 aa0.24□□□□□ -2.37
ERCC6-212ENST00000623788 TOP2BQ02880 1626 aa0.24□□□□□ -2.37
ERCC6-212ENST00000623788 CC2D2AQ9P2K1 1620 aa0.24□□□□□ -2.37
ERCC6-212ENST00000623788 SPTBN4Q9H254 2564 aa0.24□□□□□ -2.37
ERCC6-212ENST00000623788 HMGXB3Q12766 1538 aa0.24□□□□□ -2.37
ERCC6-212ENST00000623788 PTPRGP23470 1445 aa0.24□□□□□ -2.37
ERCC6-212ENST00000623788 MKI67P46013 3256 aaKnown RBP0.24□□□□□ -2.37
ERCC6-212ENST00000623788 CENPFP49454 3210 aa0.24□□□□□ -2.37
ERCC6-212ENST00000623788 M0QZK8 103 aa0.24□□□□□ -2.37
ERCC6-212ENST00000623788 DMAC1Q96GE9 116 aa0.24□□□□□ -2.37
ERCC6-212ENST00000623788 SMIM7Q9BQ49 75 aa0.24□□□□□ -2.37
ERCC6-212ENST00000623788 EPPK1P58107 5090 aaKnown RBP0.24□□□□□ -2.37
ERCC6-212ENST00000623788 FLNBO75369 2602 aaKnown RBP0.24□□□□□ -2.37
ERCC6-212ENST00000623788 COL6A3P12111 3177 aa0.24□□□□□ -2.37
ERCC6-212ENST00000623788 WDFY4Q6ZS81 3184 aa0.24□□□□□ -2.37
ERCC6-212ENST00000623788 ABCA2Q9BZC7 2435 aa0.24□□□□□ -2.37
ERCC6-212ENST00000623788 BCORL1Q5H9F3 1711 aa0.24□□□□□ -2.37
ERCC6-212ENST00000623788 NHSL1Q5SYE7 1610 aa0.24□□□□□ -2.37
ERCC6-212ENST00000623788 CPS1P31327 1500 aa0.23□□□□□ -2.37
ERCC6-212ENST00000623788 SETXQ7Z333 2677 aaKnown RBP0.23□□□□□ -2.37
ERCC6-212ENST00000623788 ZCCHC6Q5VYS8 1495 aaKnown RBP0.23□□□□□ -2.37
ERCC6-212ENST00000623788 TEX14Q8IWB6 1497 aa0.23□□□□□ -2.37
ERCC6-212ENST00000623788 MRC2Q9UBG0 1479 aa0.23□□□□□ -2.37
ERCC6-212ENST00000623788 SHANK2Q9UPX8 1470 aa0.23□□□□□ -2.37
ERCC6-212ENST00000623788 KMT2CQ8NEZ4 4911 aaKnown RBP0.23□□□□□ -2.37
ERCC6-212ENST00000623788 DISP2A7MBM2 1401 aa0.23□□□□□ -2.37
ERCC6-212ENST00000623788 CNOT1A5YKK6 2376 aaKnown RBP0.23□□□□□ -2.37
ERCC6-212ENST00000623788 BIRC6Q9NR09 4857 aa0.23□□□□□ -2.37
ERCC6-212ENST00000623788 SLC25A5P05141 298 aaKnown RBP0.23□□□□□ -2.37
ERCC6-212ENST00000623788 ZNF56Q15929 161 aa0.23□□□□□ -2.37
ERCC6-212ENST00000623788 OTOSQ8NHW6 89 aa0.23□□□□□ -2.37
ERCC6-212ENST00000623788 BRK1Q8WUW1 75 aa0.23□□□□□ -2.37
ERCC6-212ENST00000623788 SPAG17Q6Q759 2223 aa0.23□□□□□ -2.37
ERCC6-212ENST00000623788 MUC2Q02817 5179 aa0.23□□□□□ -2.37
ERCC6-212ENST00000623788 MAST4O15021 2626 aa0.23□□□□□ -2.37
ERCC6-212ENST00000623788 ESPL1Q14674 2120 aa0.23□□□□□ -2.37
ERCC6-212ENST00000623788 USP9XQ93008 2570 aaPredicted RBP0.23□□□□□ -2.37
ERCC6-212ENST00000623788 LRP5O75197 1615 aa0.23□□□□□ -2.37
ERCC6-212ENST00000623788 NESP48681 1621 aa0.23□□□□□ -2.37
ERCC6-212ENST00000623788 SYNJ1O43426 1573 aa0.23□□□□□ -2.37
ERCC6-212ENST00000623788 NWD1Q149M9 1564 aa0.23□□□□□ -2.37
ERCC6-212ENST00000623788 RB1CC1Q8TDY2 1594 aa0.23□□□□□ -2.37
ERCC6-212ENST00000623788 LAMA3Q16787 3333 aa0.23□□□□□ -2.37
ERCC6-212ENST00000623788 UNC80Q8N2C7 3258 aa0.23□□□□□ -2.37
ERCC6-212ENST00000623788 MAPKBP1O60336 1514 aa0.23□□□□□ -2.37
ERCC6-212ENST00000623788 CUX1P39880 1505 aa0.23□□□□□ -2.37
ERCC6-212ENST00000623788 CLASP1Q7Z460 1538 aa0.23□□□□□ -2.37
ERCC6-212ENST00000623788 IFT140Q96RY7 1462 aa0.22□□□□□ -2.37
ERCC6-212ENST00000623788 CFAP47Q6ZTR5 3102 aa0.22□□□□□ -2.37
ERCC6-212ENST00000623788 C10orf71Q711Q0 1435 aa0.22□□□□□ -2.37
ERCC6-212ENST00000623788 ANKRD17O75179 2603 aaKnown RBP0.22□□□□□ -2.37
ERCC6-212ENST00000623788 KIAA1109Q2LD37 5005 aa0.22□□□□□ -2.37
ERCC6-212ENST00000623788 DSTQ03001 7570 aaKnown RBP0.22□□□□□ -2.37
ERCC6-212ENST00000623788 JMJD1CQ15652 2540 aa0.22□□□□□ -2.37
ERCC6-212ENST00000623788 GOLGB1Q14789 3259 aaKnown RBP0.22□□□□□ -2.37
ERCC6-212ENST00000623788 A0A096LNT2 108 aa0.22□□□□□ -2.37
ERCC6-212ENST00000623788 A0A0G2JMM0 328 aa0.22□□□□□ -2.37
ERCC6-212ENST00000623788 CDC42EP2O14613 210 aa0.22□□□□□ -2.37
ERCC6-212ENST00000623788 TPST1O60507 370 aa0.22□□□□□ -2.37
ERCC6-212ENST00000623788 Q5XG85 94 aa0.22□□□□□ -2.37
ERCC6-212ENST00000623788 IDO2Q6ZQW0 420 aa0.22□□□□□ -2.37
ERCC6-212ENST00000623788 RYR3Q15413 4870 aa0.22□□□□□ -2.37
ERCC6-212ENST00000623788 CELSR3Q9NYQ7 3312 aa0.22□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms