RNA–Protein interactions for RNA: ENST00000623788.1

ERCC6-212, Transcript of ERCC excision repair 6, chromatin remodeling factor, humanhuman

TSL 4

Gene ERCC6, Length 562 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6-212ENST00000623788 AEBP2Q6ZN18 517 aaPredicted RBP23.15■■□□□ 1.3
ERCC6-212ENST00000623788 CHIC1Q5VXU3 224 aa21.85■■□□□ 1.09
ERCC6-212ENST00000623788 SENP3Q9H4L4 574 aaPredicted RBP19.95■□□□□ 0.78
ERCC6-212ENST00000623788 PHF23Q9BUL5 403 aaPredicted RBP19.61■□□□□ 0.73
ERCC6-212ENST00000623788 FOXD1Q16676 465 aa18.52■□□□□ 0.56
ERCC6-212ENST00000623788 MSH5O43196 834 aa17.55■□□□□ 0.4
ERCC6-212ENST00000623788 POTEDQ86YR6 584 aa17.43■□□□□ 0.38
ERCC6-212ENST00000623788 PLPPR3Q6T4P5 718 aa17.42■□□□□ 0.38
ERCC6-212ENST00000623788 PIAS4Q8N2W9 510 aaPredicted RBP17.31■□□□□ 0.36
ERCC6-212ENST00000623788 PPP6R1Q9UPN7 881 aa17.09■□□□□ 0.33
ERCC6-212ENST00000623788 ADRA2BP18089 450 aa17.06■□□□□ 0.32
ERCC6-212ENST00000623788 SCAF1Q9H7N4 1312 aaKnown RBP15.8■□□□□ 0.12
ERCC6-212ENST00000623788 DMRT2Q9Y5R5 561 aa15.74■□□□□ 0.11
ERCC6-212ENST00000623788 MAPK8IP2Q13387 824 aaPredicted RBP15.71■□□□□ 0.11
ERCC6-212ENST00000623788 CACNB1Q02641 598 aaPredicted RBP15.19■□□□□ 0.02
ERCC6-212ENST00000623788 PPP4R3CPQ6ZMV5 832 aa15.19■□□□□ 0.02
ERCC6-212ENST00000623788 DCAF8L1A6NGE4 600 aa15.16■□□□□ 0.02
ERCC6-212ENST00000623788 HOXD11P31277 338 aaPredicted RBP15.05■□□□□ -0
ERCC6-212ENST00000623788 CNKSR2Q8WXI2 1034 aa15□□□□□ -0.01
ERCC6-212ENST00000623788 RNF216Q9NWF9 866 aaPredicted RBP14.92□□□□□ -0.02
ERCC6-212ENST00000623788 RNF39Q9H2S5 420 aa14.87□□□□□ -0.03
ERCC6-212ENST00000623788 C1QBPQ07021 282 aaKnown RBP14.73□□□□□ -0.05
ERCC6-212ENST00000623788 KCNA4P22459 653 aa14.66□□□□□ -0.06
ERCC6-212ENST00000623788 DNAJC5BQ9UF47 199 aa14.66□□□□□ -0.06
ERCC6-212ENST00000623788 NCBP3Q53F19 620 aaKnown RBP14.65□□□□□ -0.06
ERCC6-212ENST00000623788 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.42□□□□□ -0.1
ERCC6-212ENST00000623788 NPM3O75607 178 aaKnown RBP14.3□□□□□ -0.12
ERCC6-212ENST00000623788 SLC4A1APQ9BWU0 796 aaKnown RBP13.99□□□□□ -0.17
ERCC6-212ENST00000623788 U3KPZ7 1027 aaPredicted RBP13.98□□□□□ -0.17
ERCC6-212ENST00000623788 CAPN15O75808 1086 aa13.93□□□□□ -0.18
ERCC6-212ENST00000623788 EHMT2Q96KQ7 1210 aa13.86□□□□□ -0.19
ERCC6-212ENST00000623788 DSG3P32926 999 aa13.85□□□□□ -0.19
ERCC6-212ENST00000623788 SPINK5Q9NQ38 1064 aaPredicted RBP13.84□□□□□ -0.19
ERCC6-212ENST00000623788 APLP2Q06481 763 aa13.78□□□□□ -0.2
ERCC6-212ENST00000623788 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.69□□□□□ -0.22
ERCC6-212ENST00000623788 HNRNPUL2Q1KMD3 747 aaKnown RBP13.69□□□□□ -0.22
ERCC6-212ENST00000623788 CSRNP3Q8WYN3 585 aa13.68□□□□□ -0.22
ERCC6-212ENST00000623788 SLC4A2P04920 1241 aa13.67□□□□□ -0.22
ERCC6-212ENST00000623788 POTEHQ6S545 545 aa13.65□□□□□ -0.22
ERCC6-212ENST00000623788 TRHP20396 242 aaPredicted RBP13.64□□□□□ -0.23
ERCC6-212ENST00000623788 ZNF219Q9P2Y4 722 aaPredicted RBP13.64□□□□□ -0.23
ERCC6-212ENST00000623788 SAMD1Q6SPF0 538 aaPredicted RBP13.55□□□□□ -0.24
ERCC6-212ENST00000623788 ZBTB22O15209 634 aa13.53□□□□□ -0.24
ERCC6-212ENST00000623788 ABCB7O75027 752 aa13.52□□□□□ -0.25
ERCC6-212ENST00000623788 FOXD4L1Q9NU39 408 aa13.44□□□□□ -0.26
ERCC6-212ENST00000623788 RBM42Q9BTD8 480 aaKnown RBP13.34□□□□□ -0.27
ERCC6-212ENST00000623788 MYCNP04198 464 aaPredicted RBP13.3□□□□□ -0.28
ERCC6-212ENST00000623788 POLA2Q14181 598 aa13.21□□□□□ -0.29
ERCC6-212ENST00000623788 CHRDL2Q6WN34 429 aa13.06□□□□□ -0.32
ERCC6-212ENST00000623788 ZBTB12Q9Y330 459 aaPredicted RBP13.02□□□□□ -0.33
ERCC6-212ENST00000623788 ATXN8OSP0DMR3 200 aa12.99□□□□□ -0.33
ERCC6-212ENST00000623788 AKT1S1Q96B36 256 aa12.94□□□□□ -0.34
ERCC6-212ENST00000623788 ATF5Q9Y2D1 282 aaPredicted RBP12.87□□□□□ -0.35
ERCC6-212ENST00000623788 REM2Q8IYK8 340 aaPredicted RBP12.77□□□□□ -0.37
ERCC6-212ENST00000623788 OSCARQ8IYS5 282 aa12.75□□□□□ -0.37
ERCC6-212ENST00000623788 SP7Q8TDD2 431 aaPredicted RBP12.7□□□□□ -0.38
ERCC6-212ENST00000623788 PIP4P2Q8N4L2 257 aa12.66□□□□□ -0.38
ERCC6-212ENST00000623788 PITPNM1O00562 1244 aa12.6□□□□□ -0.39
ERCC6-212ENST00000623788 FBLN2P98095 1184 aa12.59□□□□□ -0.39
ERCC6-212ENST00000623788 HAX1O00165 279 aa12.57□□□□□ -0.4
ERCC6-212ENST00000623788 FXR2P51116 673 aaKnown RBP eCLIP12.56□□□□□ -0.4
ERCC6-212ENST00000623788 SPDYE2BA6NHP3 402 aa12.53□□□□□ -0.4
ERCC6-212ENST00000623788 SPDYE6P0CI01 402 aa12.53□□□□□ -0.4
ERCC6-212ENST00000623788 SPDYE2Q495Y8 402 aa12.53□□□□□ -0.4
ERCC6-212ENST00000623788 SPDYE1Q8NFV5 336 aaPredicted RBP12.41□□□□□ -0.42
ERCC6-212ENST00000623788 CLEC11AQ9Y240 323 aa12.37□□□□□ -0.43
ERCC6-212ENST00000623788 ZNF692Q9BU19 519 aaPredicted RBP12.36□□□□□ -0.43
ERCC6-212ENST00000623788 PRKAR2AP13861 404 aaKnown RBP12.32□□□□□ -0.44
ERCC6-212ENST00000623788 MKRN4PQ13434 485 aaPredicted RBP12.28□□□□□ -0.44
ERCC6-212ENST00000623788 FKBP8Q14318 412 aa12.28□□□□□ -0.44
ERCC6-212ENST00000623788 SSUH2Q9Y2M2 353 aa12.27□□□□□ -0.45
ERCC6-212ENST00000623788 EVX2Q03828 476 aa12.25□□□□□ -0.45
ERCC6-212ENST00000623788 C19orf67A6NJJ6 358 aa12.16□□□□□ -0.46
ERCC6-212ENST00000623788 PRR29P0C7W0 189 aa12.16□□□□□ -0.46
ERCC6-212ENST00000623788 PABPN1Q86U42 306 aaKnown RBP eCLIP12.13□□□□□ -0.47
ERCC6-212ENST00000623788 CHADLQ6NUI6 762 aa12.07□□□□□ -0.48
ERCC6-212ENST00000623788 GABBR2O75899 941 aa12.05□□□□□ -0.48
ERCC6-212ENST00000623788 SPDYE4A6NLX3 237 aa12.02□□□□□ -0.49
ERCC6-212ENST00000623788 PROM2Q8N271 834 aa12.01□□□□□ -0.49
ERCC6-212ENST00000623788 CLCN6P51797 869 aa11.94□□□□□ -0.5
ERCC6-212ENST00000623788 FARP1Q9Y4F1 1045 aaPredicted RBP11.93□□□□□ -0.5
ERCC6-212ENST00000623788 CD44P16070 742 aaKnown RBP11.92□□□□□ -0.5
ERCC6-212ENST00000623788 LHX8Q68G74 356 aa11.92□□□□□ -0.5
ERCC6-212ENST00000623788 STAG3Q9UJ98 1225 aa11.85□□□□□ -0.51
ERCC6-212ENST00000623788 FBXO3Q9UK99 471 aa11.81□□□□□ -0.52
ERCC6-212ENST00000623788 AMER1Q5JTC6 1135 aaPredicted RBP11.77□□□□□ -0.53
ERCC6-212ENST00000623788 DCBLD2Q96PD2 775 aa11.77□□□□□ -0.53
ERCC6-212ENST00000623788 ZRANB1Q9UGI0 708 aa11.73□□□□□ -0.53
ERCC6-212ENST00000623788 RTN4Q9NQC3 1192 aaKnown RBP11.72□□□□□ -0.53
ERCC6-212ENST00000623788 POTEIP0CG38 1075 aa11.71□□□□□ -0.53
ERCC6-212ENST00000623788 ZNF579Q8NAF0 562 aaKnown RBP11.71□□□□□ -0.53
ERCC6-212ENST00000623788 CREBZFQ9NS37 354 aa11.7□□□□□ -0.54
ERCC6-212ENST00000623788 PAK3O75914 559 aaPredicted RBP11.68□□□□□ -0.54
ERCC6-212ENST00000623788 VASPP50552 380 aaPredicted RBP11.65□□□□□ -0.54
ERCC6-212ENST00000623788 NPM1P06748 294 aaKnown RBP eCLIP11.62□□□□□ -0.55
ERCC6-212ENST00000623788 GALR2O43603 387 aaPredicted RBP11.54□□□□□ -0.56
ERCC6-212ENST00000623788 IFNLR1Q8IU57 520 aaPredicted RBP11.51□□□□□ -0.57
ERCC6-212ENST00000623788 PHF12Q96QT6 1004 aa11.47□□□□□ -0.57
ERCC6-212ENST00000623788 MNX1P50219 401 aaPredicted RBP11.43□□□□□ -0.58
ERCC6-212ENST00000623788 OTUD5Q96G74 571 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms